Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr09g0332911 Lupinus albus HOM05D003880 ORTHO05D004959 0.0e+00 1159.4 585 100.0
Phvul.005G000500 Phaseolus vulgaris HOM05D003880 ORTHO05D004959 1.5e-232 809.7 586 73.0
Lalb_Chr05g0224761 Lupinus albus HOM05D003880 ORTHO05D004959 3.1e-230 802.0 591 74.8
VMungo1080G1836 Vigna mungo HOM05D003880 ORTHO05D004959 2.9e-228 795.4 583 72.4
arahy.Tifrunner.gnm1.ann1.9B0XDD Arachis hypogaea HOM05D003880 ORTHO05D004959 9.0e-222 773.9 507 78.1
arahy.Tifrunner.gnm1.ann1.HC95SM Arachis hypogaea HOM05D003880 ORTHO05D004959 2.0e-221 772.7 548 73.7
Glyma.06G324700 Glycine max HOM05D003880 ORTHO05D004959 2.5e-219 765.8 590 70.3
Lj3g0009516 Lotus japonicus HOM05D003880 ORTHO05D004959 3.2e-219 765.4 610 69.7
Glyma.04G256800 Glycine max HOM05D003880 ORTHO05D004959 8.8e-217 757.3 590 71.2
Psat1g000520 Pisum sativum HOM05D003880 ORTHO05D004959 8.5e-212 740.7 429 85.8
Medtr3g005360 Medicago truncatula HOM05D003880 ORTHO05D004959 5.5e-211 738.0 409 88.5
Ca_13965_v3 Cicer arietinum L. HOM05D003880 ORTHO05D004959 1.0e-209 733.8 413 87.4
Thecc.08G186500 Theobroma cacao HOM05D003880 ORTHO05D004959 1.3e-207 726.9 442 81.2
TAR628G0517 Trochodendron aralioides HOM05D003880 ORTHO05D004959 9.1e-206 720.7 526 71.5
Hma1.2p1_0004F.1_g004030 Hydrangea macrophylla HOM05D003880 ORTHO05D004959 2.0e-205 719.5 414 84.3
QL09p004950 Quercus lobata HOM05D003880 ORTHO05D004959 4.5e-205 718.4 413 85.0
Duzib177G0936 Durio zibethinus HOM05D003880 ORTHO05D004959 1.7e-204 716.5 442 80.1
CiPaw.03G019400 Carya illinoinensis HOM05D003880 ORTHO05D004959 2.2e-204 716.1 528 71.2
TPR.G25498 Trifolium pratense HOM05D003880 ORTHO05D004959 2.2e-204 716.1 409 85.8
Gorai.006G130000 Gossypium raimondii HOM05D003880 ORTHO05D004959 3.8e-204 715.3 448 79.2
Actinidia23014 Actinidia chinensis HOM05D003880 ORTHO05D004959 8.5e-204 714.1 517 72.0
TWI14G0176 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 1.1e-203 713.8 605 65.6
GSVIVG01012776001 Vitis vinifera HOM05D003880 ORTHO05D004959 2.5e-203 712.6 442 80.3
Gohir.D09G112200 Gossypium hirsutum HOM05D003880 ORTHO05D004959 1.6e-202 709.9 448 78.8
Nn5g27605 Nelumbo nucifera HOM05D003880 ORTHO05D004959 1.0e-201 707.2 434 80.6
TWI59G0907 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 2.3e-201 706.1 603 65.0
Dinv02585 Davidia involucrata HOM05D003880 ORTHO05D004959 3.9e-201 705.3 458 77.5
Cfa008134 Carpinus fangiana HOM05D003880 ORTHO05D004959 6.7e-201 704.5 427 82.2
COL.COLO4_12797 Corchorus olitorius HOM05D003880 ORTHO05D004959 2.6e-200 702.6 442 78.3
CiPaw.04G012900 Carya illinoinensis HOM05D003880 ORTHO05D004959 3.3e-200 702.2 412 82.8
Prupe.1G551200 Prunus persica HOM05D003880 ORTHO05D004959 3.7e-199 698.7 430 81.2
Actinidia02567 Actinidia chinensis HOM05D003880 ORTHO05D004959 8.2e-199 697.6 484 73.8
Eucgr.F02584 Eucalyptus grandis HOM05D003880 ORTHO05D004959 1.8e-198 696.4 512 70.5
Lj7A289G27 Lonicera japonica HOM05D003880 ORTHO05D004959 2.4e-198 696.0 438 79.0
ClCG08G000380 Citrullus lanatus HOM05D003880 ORTHO05D004959 3.1e-198 695.7 428 80.8
Duzib116G0170 Durio zibethinus HOM05D003880 ORTHO05D004959 1.6e-197 693.3 439 78.1
Cpa.g.sc66.21 Carica papaya HOM05D003880 ORTHO05D004959 4.5e-197 691.8 583 63.5
Cc00_g06530 Coffea canephora HOM05D003880 ORTHO05D004959 5.9e-197 691.4 414 81.2
Atru.chr13.2392 Acer truncatum HOM05D003880 ORTHO05D004959 1.0e-196 690.6 443 77.4
Lj4A481T13 Lonicera japonica HOM05D003880 ORTHO05D004959 1.0e-196 690.6 432 79.4
PGR042G0805 Punica granatum HOM05D003880 ORTHO05D004959 1.7e-196 689.9 456 75.7
Ciclev10000797m.g Citrus clementina HOM05D003880 ORTHO05D004959 2.2e-196 689.5 478 73.4
Manes.02G194600 Manihot esculenta HOM05D003880 ORTHO05D004959 1.5e-195 686.8 604 62.3
Migut.C01288 Erythranthe guttata HOM05D003880 ORTHO05D004959 3.2e-195 685.6 447 76.1
MBI17_g21473_MAGBIO Magnolia biondii HOM05D003880 ORTHO05D004959 3.2e-195 685.6 444 76.8
MD10G1100400 Malus domestica HOM05D003880 ORTHO05D004959 2.7e-194 682.6 528 68.9
Peaxi162Scf00391g00533 Petunia axillaris HOM05D003880 ORTHO05D004959 2.7e-194 682.6 432 77.3
PSO017G2071 Papaver somniferum HOM05D003880 ORTHO05D004959 3.6e-194 682.2 459 74.3
Aqoxy4G01178 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 6.1e-194 681.4 475 72.8
CANSAT11G2580 Cannabis sativa HOM05D003880 ORTHO05D004959 8.0e-194 681.0 584 64.2
PSO063G4997 Papaver somniferum HOM05D003880 ORTHO05D004959 8.0e-194 681.0 459 74.5
vmacro12476 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 1.0e-193 680.6 443 75.8
THA.LOC104800120 Tarenaya hassleriana HOM05D003880 ORTHO05D004959 1.4e-193 680.2 413 81.6
DCAR_001082 Daucus carota HOM05D003880 ORTHO05D004959 1.8e-193 679.9 411 80.5
FAN13G2674 Fragaria x ananassa HOM05D003880 ORTHO05D004959 5.2e-193 678.3 412 81.6
Nitab4.5_0000167g0290 Nicotiana tabacum HOM05D003880 ORTHO05D004959 6.7e-193 677.9 412 80.8
Potri.019G081600 Populus trichocarpa HOM05D003880 ORTHO05D004959 6.7e-193 677.9 427 78.7
MD05G1093300 Malus domestica HOM05D003880 ORTHO05D004959 1.2e-192 677.2 612 61.9
MELO3C022212.2 Cucumis melo HOM05D003880 ORTHO05D004959 1.5e-192 676.8 607 62.9
HanXRQChr09g0260531 Helianthus annuus HOM05D003880 ORTHO05D004959 1.5e-192 676.8 504 70.2
FvH4_5g32350 Fragaria vesca HOM05D003880 ORTHO05D004959 2.6e-192 676.0 412 81.3
Sc23g0001360 Simmondsia chinensis HOM05D003880 ORTHO05D004959 2.6e-192 676.0 476 72.1
CsaV3_5G040400 Cucumis sativus L. HOM05D003880 ORTHO05D004959 3.3e-192 675.6 601 62.9
Rhsim06G0088000 Rhododendron simsii HOM05D003880 ORTHO05D004959 4.4e-192 675.2 475 72.2
FAN04G0842 Fragaria x ananassa HOM05D003880 ORTHO05D004959 7.5e-192 674.5 534 67.6
Manes.18G103500 Manihot esculenta HOM05D003880 ORTHO05D004959 7.5e-192 674.5 593 62.4
Lsat_1_v5_gn_1_10140 Lactuca sativa HOM05D003880 ORTHO05D004959 9.7e-192 674.1 577 64.8
Sabra19G0093200 Salix brachista HOM05D003880 ORTHO05D004959 9.7e-192 674.1 461 73.8
SGA_v2.0_scaffold24G10581 Striga asiatica HOM05D003880 ORTHO05D004959 9.7e-192 674.1 424 79.2
FAN08G3431 Fragaria x ananassa HOM05D003880 ORTHO05D004959 3.7e-191 672.2 563 65.5
SGA_v2.0_scaffold118G32535 Striga asiatica HOM05D003880 ORTHO05D004959 3.7e-191 672.2 601 61.7
Aa31LG4G10790 Aethionema arabicum HOM05D003880 ORTHO05D004959 4.1e-190 668.7 442 74.2
RcHm_v2.0_Chr7g0228851 Rosa chinensis HOM05D003880 ORTHO05D004959 7.0e-190 667.9 412 80.6
SalBow6G4536 Salvia bowleyana HOM05D003880 ORTHO05D004959 7.0e-190 667.9 408 79.4
SalBow6G5395 Salvia bowleyana HOM05D003880 ORTHO05D004959 7.0e-190 667.9 408 79.4
Carub.0001s2216 Capsella rubella HOM05D003880 ORTHO05D004959 9.1e-190 667.5 440 75.7
SalBow7G4466 Salvia bowleyana HOM05D003880 ORTHO05D004959 9.1e-190 667.5 409 79.0
Migut.N03362 Erythranthe guttata HOM05D003880 ORTHO05D004959 2.7e-189 666.0 412 79.1
Sabra13G0094300 Salix brachista HOM05D003880 ORTHO05D004959 3.5e-189 665.6 410 80.0
SGA_v2.0_scaffold149G36569 Striga asiatica HOM05D003880 ORTHO05D004959 3.5e-189 665.6 476 70.2
PGSC0003DMG400009278 Solanum tuberosum HOM05D003880 ORTHO05D004959 5.9e-189 664.8 440 76.1
Sopen11g010860 Solanum pennellii HOM05D003880 ORTHO05D004959 1.0e-188 664.1 412 79.1
Dinv41735 Davidia involucrata HOM05D003880 ORTHO05D004959 2.9e-188 662.5 417 78.9
Aqoxy7G03411 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 3.8e-188 662.1 410 78.3
FAN18G3221 Fragaria x ananassa HOM05D003880 ORTHO05D004959 3.8e-188 662.1 547 65.8
Solyc11g020780.2 Solanum lycopersicum HOM05D003880 ORTHO05D004959 5.0e-188 661.8 412 78.4
MSTRG.1545 Avicennia marina HOM05D003880 ORTHO05D004959 6.5e-188 661.4 409 80.0
CAN.G259.4 Capsicum annuum HOM05D003880 ORTHO05D004959 2.5e-187 659.4 449 74.4
CDE04G1048 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 3.2e-187 659.1 409 78.2
unitig_747.g21476 Utricularia gibba HOM05D003880 ORTHO05D004959 5.5e-187 658.3 411 78.8
Oeu025391.1 Olea europaea HOM05D003880 ORTHO05D004959 7.2e-187 657.9 409 79.2
Migut.O00683 Erythranthe guttata HOM05D003880 ORTHO05D004959 1.2e-186 657.1 412 78.2
Gohir.A09G115400 Gossypium hirsutum HOM05D003880 ORTHO05D004959 1.2e-186 657.1 448 75.0
Potri.013G109400 Populus trichocarpa HOM05D003880 ORTHO05D004959 1.2e-186 657.1 574 62.7
Lsat_1_v5_gn_4_136101 Lactuca sativa HOM05D003880 ORTHO05D004959 2.7e-186 656.0 551 63.3
ATR0661G349 Amborella trichopoda HOM05D003880 ORTHO05D004959 2.3e-185 652.9 424 76.2
CDE04G1100 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 3.0e-185 652.5 409 77.0
CARHR064840 Cardamine hirsuta HOM05D003880 ORTHO05D004959 2.6e-184 649.4 593 60.5
Os01g0874100 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 2.6e-184 649.4 404 79.0
Aa31LG7G6540 Aethionema arabicum HOM05D003880 ORTHO05D004959 5.7e-184 648.3 545 62.4
A07p38210 Brassica napus HOM05D003880 ORTHO05D004959 9.8e-184 647.5 436 74.8
BraA07t31387Z Brassica rapa HOM05D003880 ORTHO05D004959 1.3e-183 647.1 436 74.5
BcaB03g14926 Brassica carinata HOM05D003880 ORTHO05D004959 1.7e-183 646.7 508 67.1
vmacro00757 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 2.2e-183 646.4 601 60.1
Os05g0430200 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 3.7e-183 645.6 405 78.8
Actinidia05639 Actinidia chinensis HOM05D003880 ORTHO05D004959 1.1e-182 644.0 475 71.2
BolC6t39667H Brassica oleracea HOM05D003880 ORTHO05D004959 1.4e-182 643.7 539 64.0
BcaC08g46654 Brassica carinata HOM05D003880 ORTHO05D004959 2.4e-182 642.9 539 64.0
C06p46140 Brassica napus HOM05D003880 ORTHO05D004959 2.4e-182 642.9 551 62.6
AUR62004625 Chenopodium quinoa HOM05D003880 ORTHO05D004959 5.4e-182 641.7 528 63.3
AUR62023520 Chenopodium quinoa HOM05D003880 ORTHO05D004959 7.0e-182 641.3 528 63.4
Thhalv10018309m.g Eutrema salsugineum HOM05D003880 ORTHO05D004959 1.6e-181 640.2 447 71.8
Hund16787 Selenicereus undatus HOM05D003880 ORTHO05D004959 1.6e-181 640.2 440 72.7
A02p17640 Brassica napus HOM05D003880 ORTHO05D004959 2.7e-181 639.4 465 70.5
BraA02t06810Z Brassica rapa HOM05D003880 ORTHO05D004959 2.7e-181 639.4 465 70.5
BcaB05g24701 Brassica carinata HOM05D003880 ORTHO05D004959 3.5e-181 639.0 440 72.3
Sp5g27110 Schrenkiella parvula HOM05D003880 ORTHO05D004959 3.5e-181 639.0 609 59.1
AL2G31670 Arabidopsis lyrata HOM05D003880 ORTHO05D004959 5.9e-181 638.3 435 73.8
Carub.0002s1882 Capsella rubella HOM05D003880 ORTHO05D004959 1.0e-180 637.5 598 59.9
Zm00001eb146250 Zea mays HOM05D003880 ORTHO05D004959 2.3e-180 636.3 404 75.0
BcaC03g15327 Brassica carinata HOM05D003880 ORTHO05D004959 2.9e-180 636.0 429 74.6
C02p29320 Brassica napus HOM05D003880 ORTHO05D004959 2.9e-180 636.0 429 74.6
BolC2t08983H Brassica oleracea HOM05D003880 ORTHO05D004959 2.9e-180 636.0 429 74.6
AT1G72040 Arabidopsis thaliana HOM05D003880 ORTHO05D004959 1.9e-179 633.3 408 76.5
Zm00001eb348750 Zea mays HOM05D003880 ORTHO05D004959 2.5e-179 632.9 417 74.3
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 7.2e-179 631.3 409 76.0
HanXRQChr11g0326071 Helianthus annuus HOM05D003880 ORTHO05D004959 2.1e-178 629.8 411 77.9
unitig_0.g2129 Utricularia gibba HOM05D003880 ORTHO05D004959 1.5e-176 623.6 364 82.7
EL10Ac1g00108 Beta vulgaris HOM05D003880 ORTHO05D004959 3.4e-176 622.5 412 75.2
DCAR_011525 Daucus carota HOM05D003880 ORTHO05D004959 3.1e-174 615.9 554 58.3
Sed0018926 Sechium edule HOM05D003880 ORTHO05D004959 4.1e-174 615.5 342 86.3
Actinidia03514 Actinidia chinensis HOM05D003880 ORTHO05D004959 6.1e-170 601.7 363 81.3
Ah.05g178350 Amaranthus hybridus HOM05D003880 ORTHO05D004959 3.2e-166 589.3 588 56.3
CDE04G1975 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 7.3e-163 578.2 392 73.0
Oeu004740.1 Olea europaea HOM05D003880 ORTHO05D004959 3.6e-162 575.9 464 66.4
Nitab4.5_0003010g0030 Nicotiana tabacum HOM05D003880 ORTHO05D004959 2.8e-154 549.7 376 74.2
Pp3c12_15090 Physcomitrium patens HOM05D003880 ORTHO05D004959 2.3e-148 530.0 414 64.5
SHI35657 Sapria himalayana HOM05D003880 ORTHO05D004959 9.5e-147 524.6 379 69.1
SEGI_26933 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 3.1e-145 519.6 357 70.3
Mapoly0028s0143 Marchantia polymorpha HOM05D003880 ORTHO05D004959 6.8e-145 518.5 433 61.9
SMO228G0044 Selaginella moellendorffii HOM05D003880 ORTHO05D004959 7.6e-136 488.4 349 69.6
TAR624G0155 Trochodendron aralioides HOM05D003880 ORTHO05D004959 1.7e-135 487.3 377 66.8
SEGI_09673 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 1.2e-133 481.1 329 71.1
BraA02t08014Z Brassica rapa HOM05D003880 ORTHO05D004959 6.1e-101 372.5 209 83.3
A02p29920 Brassica napus HOM05D003880 ORTHO05D004959 5.0e-95 352.8 197 83.2
PRCOL_00007080 Prasinoderma coloniale HOM05D003880 ORTHO05D004959 4.7e-93 346.3 371 49.6
FAN04G1012 Fragaria x ananassa HOM05D003880 ORTHO05D004959 1.6e-85 321.2 317 58.7
BcaNung01810 Brassica carinata HOM05D003880 ORTHO05D004959 1.8e-84 317.8 180 81.7
CSS0041582 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 2.1e-77 294.3 159 86.2
CSS0012164 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 3.6e-77 293.5 156 87.8
CSS0024003 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 3.6e-77 293.5 156 87.8
AagrBONN_evm.TU.Sc2ySwM_344.3442 Anthoceros agrestis HOM05D003880 ORTHO05D004959 1.0e-76 292.0 226 65.9
HPP92_019380 Vanilla planifolia HOM05D003880 ORTHO05D004959 2.3e-63 247.7 205 62.4
MCO01G353 Micromonas commoda HOM05D003880 ORTHO05D004959 3.8e-63 246.9 359 38.7
Cre02.g095350 Chlamydomonas reinhardtii HOM05D003880 ORTHO05D004959 1.2e-51 208.8 308 38.3
HPP92_027627 Vanilla planifolia HOM05D003880 ORTHO05D004959 2.0e-51 208.0 168 64.9
Pp3c15_5240 Physcomitrium patens HOM05D003880 ORTHO05D004959 1.9e-46 191.4 264 39.0
HPP92_019377 Vanilla planifolia HOM05D003880 ORTHO05D004959 1.2e-45 188.7 127 74.8
BolC8t50393H Brassica oleracea HOM05D003880 ORTHO05D004959 2.0e-43 181.4 189 52.9
BolC5t31452H Brassica oleracea HOM05D003880 ORTHO05D004959 4.9e-42 176.8 109 77.1
Pp3c4_20480 Physcomitrium patens HOM05D003880 ORTHO05D004959 3.6e-37 160.6 110 69.1
BcaB08g34411 Brassica carinata HOM05D003880 ORTHO05D004959 2.4e-33 147.9 152 54.6
Actinidia18360 Actinidia chinensis HOM05D003880 ORTHO05D004959 1.6e-32 145.2 88 76.1
Mapoly0080s0005 Marchantia polymorpha HOM05D003880 ORTHO05D004959 1.3e-31 142.1 210 37.6
C08p27770 Brassica napus HOM05D003880 ORTHO05D004959 3.9e-31 140.6 83 75.9
BcaC07g39615 Brassica carinata HOM05D003880 ORTHO05D004959 4.3e-30 137.1 83 73.5
BcaB05g25101 Brassica carinata HOM05D003880 ORTHO05D019999 5.6e-30 136.7 130 54.6
Oeu021226.1 Olea europaea HOM05D003880 ORTHO05D019999 1.1e-28 132.5 100 67.0
HPP92_027628 Vanilla planifolia HOM05D003880 ORTHO05D019999 1.1e-20 105.9 114 50.9
BcaB07g33153 Brassica carinata HOM05D003880 ORTHO05D019999 9.0e-20 102.8 100 56.0
BcaB02g09679 Brassica carinata HOM05D003880 ORTHO05D019999 2.7e-16 91.3 92 54.3
PRCOL_00005076 Prasinoderma coloniale HOM05D003880 ORTHO05D333288 5.6e-14 83.6 175 34.3
CAN.G308.60 Capsicum annuum HOM05D003880 ORTHO05D000314 6.9e-12 76.6 111 40.5
Lsat_1_v5_gn_1_10160 Lactuca sativa HOM05D003880 ORTHO05D019999 1.2e-11 75.9 41 85.4
Oeu004742.1 Olea europaea HOM05D003880 ORTHO05D004959 1.6e-08 65.5 175 33.7
Rhsim01G0139900 Rhododendron simsii HOM05D002321 ORTHO05D006445 6.7e-07 60.1 48 64.6
COL.COLO4_03399 Corchorus olitorius HOM05D003880 ORTHO05D019999 1.9e-06 58.5 32 75.0


User provided reference genes

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