Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr09g0321931 Lupinus albus HOM05D005603 ORTHO05D006944 5.3e-104 380.9 181 100.0
arahy.Tifrunner.gnm1.ann1.8YZ064 Arachis hypogaea HOM05D005603 ORTHO05D006944 2.7e-92 342.0 171 91.8
Lalb_Chr16g0377611 Lupinus albus HOM05D005603 ORTHO05D006944 3.1e-88 328.6 164 94.5
arahy.Tifrunner.gnm1.ann1.V913IW Arachis hypogaea HOM05D005603 ORTHO05D006944 1.2e-87 326.6 161 93.2
Manes.02G101300 Manihot esculenta HOM05D005603 ORTHO05D006944 1.3e-86 323.2 160 92.5
Glyma.01G168600 Glycine max HOM05D005603 ORTHO05D006944 1.1e-85 320.1 161 90.1
COL.COLO4_21962 Corchorus olitorius HOM05D005603 ORTHO05D006944 1.4e-85 319.7 160 91.2
VMungo1215G2039 Vigna mungo HOM05D005603 ORTHO05D006944 1.4e-85 319.7 161 90.1
Phvul.002G111500 Phaseolus vulgaris HOM05D005603 ORTHO05D006944 2.5e-85 318.9 161 90.1
Medtr5g021520 Medicago truncatula HOM05D005603 ORTHO05D006944 4.2e-85 318.2 161 89.4
QL06p033966 Quercus lobata HOM05D005603 ORTHO05D006944 4.2e-85 318.2 162 89.5
MSTRG.15764 Avicennia marina HOM05D005603 ORTHO05D006944 5.5e-85 317.8 159 91.2
Ca_24898_v3 Cicer arietinum L. HOM05D005603 ORTHO05D006944 5.5e-85 317.8 161 89.4
Eucgr.I02369 Eucalyptus grandis HOM05D005603 ORTHO05D006944 1.6e-84 316.2 159 90.6
Lj4C215G4 Lonicera japonica HOM05D005603 ORTHO05D006944 1.6e-84 316.2 160 91.2
Psat2g155920 Pisum sativum HOM05D005603 ORTHO05D006944 1.6e-84 316.2 161 89.4
CsaV3_6G046890 Cucumis sativus L. HOM05D005603 ORTHO05D006944 2.1e-84 315.8 162 87.7
Prupe.7G165200 Prunus persica HOM05D005603 ORTHO05D006944 2.1e-84 315.8 160 88.8
HanXRQChr16g0531111 Helianthus annuus HOM05D005603 ORTHO05D006944 2.7e-84 315.5 160 89.4
TPR.G2333 Trifolium pratense HOM05D005603 ORTHO05D006944 2.7e-84 315.5 161 88.2
MD15G1249000 Malus domestica HOM05D005603 ORTHO05D006944 4.6e-84 314.7 159 88.7
Cpa.g.sc6.214 Carica papaya HOM05D005603 ORTHO05D006944 6.1e-84 314.3 160 90.6
MELO3C007885.2 Cucumis melo HOM05D005603 ORTHO05D006944 6.1e-84 314.3 162 87.0
Glyma.11G074800 Glycine max HOM05D005603 ORTHO05D006944 6.1e-84 314.3 161 88.8
Lsat_1_v5_gn_3_73720 Lactuca sativa HOM05D005603 ORTHO05D006944 1.0e-83 313.5 159 89.3
Nitab4.5_0008176g0030 Nicotiana tabacum HOM05D005603 ORTHO05D006944 1.0e-83 313.5 160 89.4
ClCG01G020120 Citrullus lanatus HOM05D005603 ORTHO05D006944 1.4e-83 313.2 160 88.1
Gohir.A02G169100 Gossypium hirsutum HOM05D005603 ORTHO05D006944 1.4e-83 313.2 160 88.8
Gohir.D03G010900 Gossypium hirsutum HOM05D005603 ORTHO05D006944 1.4e-83 313.2 160 88.8
Gorai.003G011300 Gossypium raimondii HOM05D005603 ORTHO05D006944 1.4e-83 313.2 160 88.8
Sc03g0003440 Simmondsia chinensis HOM05D005603 ORTHO05D006944 1.4e-83 313.2 163 87.7
THA.LOC104819186 Tarenaya hassleriana HOM05D005603 ORTHO05D006944 1.8e-83 312.8 160 88.8
Migut.L00039 Erythranthe guttata HOM05D005603 ORTHO05D006944 2.3e-83 312.4 158 90.5
Nn5g29214 Nelumbo nucifera HOM05D005603 ORTHO05D006944 2.3e-83 312.4 160 88.8
SGA_v2.0_scaffold47G17673 Striga asiatica HOM05D005603 ORTHO05D006944 2.3e-83 312.4 159 88.1
Thhalv10010418m.g Eutrema salsugineum HOM05D005603 ORTHO05D006944 3.0e-83 312.0 163 84.0
Nitab4.5_0000912g0020 Nicotiana tabacum HOM05D005603 ORTHO05D006944 3.0e-83 312.0 160 88.8
Carub.0005s1753 Capsella rubella HOM05D005603 ORTHO05D006944 3.9e-83 311.6 163 84.0
Lj2g0023828 Lotus japonicus HOM05D005603 ORTHO05D006944 3.9e-83 311.6 166 87.3
Aa31LG4G19220 Aethionema arabicum HOM05D005603 ORTHO05D006944 5.1e-83 311.2 163 85.3
FvH4_1g12160 Fragaria vesca HOM05D005603 ORTHO05D006944 5.1e-83 311.2 161 87.6
MD02G1111100 Malus domestica HOM05D005603 ORTHO05D006944 5.1e-83 311.2 159 87.4
Thecc.01G023100 Theobroma cacao HOM05D005603 ORTHO05D006944 5.1e-83 311.2 160 88.8
Aqoxy5G01490 Aquilegia oxysepala HOM05D005603 ORTHO05D006944 6.7e-83 310.8 161 88.2
CSS0040106 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 6.7e-83 310.8 160 89.4
RcHm_v2.0_Chr2g0099911 Rosa chinensis HOM05D005603 ORTHO05D006944 6.7e-83 310.8 161 87.6
A03p48150 Brassica napus HOM05D005603 ORTHO05D006944 8.8e-83 310.5 160 86.2
BraA03t13922Z Brassica rapa HOM05D005603 ORTHO05D006944 8.8e-83 310.5 160 86.2
CANSAT01G2298 Cannabis sativa HOM05D005603 ORTHO05D006944 8.8e-83 310.5 161 87.6
CiPaw.07G056000 Carya illinoinensis HOM05D005603 ORTHO05D006944 8.8e-83 310.5 159 89.3
DCAR_021493 Daucus carota HOM05D005603 ORTHO05D006944 8.8e-83 310.5 163 87.1
FAN26G2705 Fragaria x ananassa HOM05D005603 ORTHO05D006944 1.1e-82 310.1 161 87.6
TWI09G0997 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 1.5e-82 309.7 160 88.8
Duzib264G0505 Durio zibethinus HOM05D005603 ORTHO05D006944 2.0e-82 309.3 160 90.0
FAN28G0526 Fragaria x ananassa HOM05D005603 ORTHO05D006944 2.0e-82 309.3 161 87.0
Rhsim08G0035200 Rhododendron simsii HOM05D005603 ORTHO05D006944 2.0e-82 309.3 170 84.1
Hund16476 Selenicereus undatus HOM05D005603 ORTHO05D006944 2.0e-82 309.3 174 81.0
Sopen02g029190 Solanum pennellii HOM05D005603 ORTHO05D006944 2.0e-82 309.3 160 88.1
PGSC0003DMG400003547 Solanum tuberosum HOM05D005603 ORTHO05D006944 2.0e-82 309.3 160 88.1
FAN19G0288 Fragaria x ananassa HOM05D005603 ORTHO05D006944 2.5e-82 308.9 161 87.0
FAN23G1635 Fragaria x ananassa HOM05D005603 ORTHO05D006944 4.3e-82 308.1 161 87.0
Sabra05G0096200 Salix brachista HOM05D005603 ORTHO05D006944 5.7e-82 307.8 162 87.0
Sed0002868 Sechium edule HOM05D005603 ORTHO05D006944 1.3e-81 306.6 163 85.3
AT3G51130 Arabidopsis thaliana HOM05D005603 ORTHO05D006944 1.7e-81 306.2 163 82.8
Oeu035330.1 Olea europaea HOM05D005603 ORTHO05D006944 1.7e-81 306.2 157 87.9
unitig_32.g11821 Utricularia gibba HOM05D005603 ORTHO05D006944 2.2e-81 305.8 159 85.5
SalBow8G5567 Salvia bowleyana HOM05D005603 ORTHO05D006944 4.8e-81 304.7 159 88.1
Potri.005G117200 Populus trichocarpa HOM05D005603 ORTHO05D006944 6.3e-81 304.3 158 89.2
TWI53G1238 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 6.3e-81 304.3 159 87.4
CDE05G2538 Ceratophyllum demersum HOM05D005603 ORTHO05D006944 8.2e-81 303.9 160 85.6
TAR628G0819 Trochodendron aralioides HOM05D005603 ORTHO05D006944 1.1e-80 303.5 159 86.2
AUR62007651 Chenopodium quinoa HOM05D005603 ORTHO05D006944 1.4e-80 303.1 161 85.7
Sp5g11080 Schrenkiella parvula HOM05D005603 ORTHO05D006944 1.4e-80 303.1 162 83.3
PSO541G2355 Papaver somniferum HOM05D005603 ORTHO05D006944 1.8e-80 302.8 160 85.6
PSO675G2068 Papaver somniferum HOM05D005603 ORTHO05D006944 1.8e-80 302.8 160 85.6
AL5G31550 Arabidopsis lyrata HOM05D005603 ORTHO05D006944 2.4e-80 302.4 163 82.2
Potri.007G015800 Populus trichocarpa HOM05D005603 ORTHO05D006944 4.1e-80 301.6 159 86.8
C07p46180 Brassica napus HOM05D005603 ORTHO05D006944 6.9e-80 300.8 160 85.0
BolC7t45134H Brassica oleracea HOM05D005603 ORTHO05D006944 6.9e-80 300.8 160 85.0
Ciclev10025760m.g Citrus clementina HOM05D005603 ORTHO05D006944 9.1e-80 300.4 163 85.9
ATR0620G128 Amborella trichopoda HOM05D005603 ORTHO05D006944 1.2e-79 300.1 160 84.4
Hma1.2p1_0743F.1_g211450 Hydrangea macrophylla HOM05D005603 ORTHO05D006944 2.0e-79 299.3 171 84.8
Hund14030 Selenicereus undatus HOM05D005603 ORTHO05D006944 3.4e-79 298.5 161 83.2
BcaC06g33053 Brassica carinata HOM05D005603 ORTHO05D006944 5.9e-79 297.7 160 84.4
TAR376G0194 Trochodendron aralioides HOM05D005603 ORTHO05D006944 5.9e-79 297.7 159 85.5
Sed0017160 Sechium edule HOM05D005603 ORTHO05D006944 7.7e-79 297.4 160 85.0
EL10As8g23850 Beta vulgaris HOM05D005603 ORTHO05D006944 1.0e-78 297.0 156 87.2
CSS0001882 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 1.3e-78 296.6 161 84.5
CARHR160730 Cardamine hirsuta HOM05D005603 ORTHO05D006944 2.2e-78 295.8 163 79.1
Cc07_g10420 Coffea canephora HOM05D005603 ORTHO05D006944 2.9e-78 295.4 147 91.8
GSVIVG01018824001 Vitis vinifera HOM05D005603 ORTHO05D006944 3.8e-78 295.0 149 89.9
CSS0042462 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 5.0e-78 294.7 161 84.5
Haze_03808 Corylus avellana HOM05D005603 ORTHO05D006944 5.0e-78 294.7 168 81.5
Ah.02g124640 Amaranthus hybridus HOM05D005603 ORTHO05D006944 8.5e-78 293.9 161 83.2
Duzib147G0771 Durio zibethinus HOM05D005603 ORTHO05D006944 1.1e-77 293.5 149 89.3
Peaxi162Scf00083g01233 Petunia axillaris HOM05D005603 ORTHO05D006944 1.1e-77 293.5 160 85.0
ECA246G4842 Erigeron canadensis HOM05D005603 ORTHO05D006944 2.5e-77 292.4 149 87.9
Os06g0714000 Oryza sativa ssp. japonica HOM05D005603 ORTHO05D006944 9.4e-77 290.4 157 84.7
HPP92_025419 Vanilla planifolia HOM05D005603 ORTHO05D006944 1.6e-76 289.7 157 84.1
A09p44190 Brassica napus HOM05D005603 ORTHO05D006944 1.4e-75 286.6 160 80.0
BraA09t39879Z Brassica rapa HOM05D005603 ORTHO05D006944 1.4e-75 286.6 160 80.0
BolC8t50258H Brassica oleracea HOM05D005603 ORTHO05D006944 1.8e-75 286.2 160 79.4
MSTRG.3829 Avicennia marina HOM05D005603 ORTHO05D006944 1.4e-72 276.6 159 79.9
BcaB01g00547 Brassica carinata HOM05D005603 ORTHO05D006944 1.4e-72 276.6 149 79.9
CAN.G358.2 Capsicum annuum HOM05D005603 ORTHO05D006944 2.6e-71 272.3 149 82.6
vmacro18394 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 3.5e-63 245.4 130 83.1
C08p26410 Brassica napus HOM05D005603 ORTHO05D006944 1.7e-62 243.0 130 82.3
vmacro22086 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 1.7e-62 243.0 129 82.9
Sabra07G0013000 Salix brachista HOM05D005603 ORTHO05D006944 2.7e-60 235.7 159 72.3
Pp3c2_6370 Physcomitrium patens HOM05D005603 ORTHO05D006944 1.4e-59 233.4 148 70.3
SMO037G0002 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 2.3e-59 232.6 149 69.1
SMO117G0153 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 2.3e-59 232.6 149 69.1
AagrBONN_evm.TU.Sc2ySwM_228.543 Anthoceros agrestis HOM05D005603 ORTHO05D006944 6.7e-59 231.1 150 69.3
Zm00001eb227930 Zea mays HOM05D005603 ORTHO05D006944 1.2e-58 230.3 157 71.3
Mapoly0152s0028 Marchantia polymorpha HOM05D005603 ORTHO05D006944 1.3e-57 226.9 148 68.2
Pp3c10_8990 Physcomitrium patens HOM05D005603 ORTHO05D006944 4.8e-57 224.9 148 68.9
Migut.H02480 Erythranthe guttata HOM05D005603 ORTHO05D006944 1.1e-53 213.8 118 83.1
Actinidia26078 Actinidia chinensis HOM05D005603 ORTHO05D006944 1.0e-51 207.2 150 69.3
CBR_g36682 Chara braunii HOM05D005603 ORTHO05D000002 4.0e-51 205.3 143 63.6
Mapoly0094s0075 Marchantia polymorpha HOM05D005603 ORTHO05D006944 1.3e-49 200.3 142 64.8
SEGI_22640 Sequoiadendron giganteum HOM05D005603 ORTHO05D006944 6.6e-38 161.4 97 74.2
Nn015s41468 Nelumbo nucifera HOM05D005603 ORTHO05D006944 2.2e-33 146.4 76 82.9
Actinidia31013 Actinidia chinensis HOM05D005603 ORTHO05D006944 4.6e-31 138.7 72 88.9
PRCOL_00000516 Prasinoderma coloniale HOM05D005603 ORTHO05D006944 6.0e-31 138.3 162 44.4
Actinidia31012 Actinidia chinensis HOM05D005603 ORTHO05D006944 3.6e-28 129.0 64 85.9
Dinv40059 Davidia involucrata HOM05D005603 ORTHO05D006944 1.4e-27 127.1 63 87.3
Dinv33602 Davidia involucrata HOM05D005603 ORTHO05D006944 4.0e-27 125.6 63 84.1
Nn015s41469 Nelumbo nucifera HOM05D005603 ORTHO05D006944 8.9e-27 124.4 63 84.1
Atru.chr2.40 Acer truncatum HOM05D005603 ORTHO05D006944 6.2e-20 101.7 61 75.4
Cfa027245 Carpinus fangiana HOM05D005603 ORTHO05D006944 2.4e-11 73.2 146 32.9
COL.COLO4_32114 Corchorus olitorius HOM05D000931 ORTHO05D002226 4.6e-07 58.9 51 58.8


User provided reference genes

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