Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr08g0246871 Lupinus albus HOM05D005203 ORTHO05D006383 5.8e-250 867.1 431 100.0
Glyma.06G000300 Glycine max HOM05D005203 ORTHO05D006383 1.9e-216 755.7 444 85.6
Glyma.04G000400 Glycine max HOM05D005203 ORTHO05D006383 6.7e-214 747.3 444 84.2
Lj1g0021981 Lotus japonicus HOM05D005203 ORTHO05D006383 1.2e-210 736.5 444 83.1
Phvul.009G115600 Phaseolus vulgaris HOM05D005203 ORTHO05D006383 2.2e-209 732.3 444 82.7
arahy.Tifrunner.gnm1.ann1.H6WGQ1 Arachis hypogaea HOM05D005203 ORTHO05D006383 3.2e-208 728.4 427 84.8
Ca_15273_v3 Cicer arietinum L. HOM05D005203 ORTHO05D006383 3.5e-207 724.9 446 82.1
TPR.G38553 Trifolium pratense HOM05D005203 ORTHO05D006383 1.9e-205 719.2 439 82.5
CiPaw.06G115500 Carya illinoinensis HOM05D005203 ORTHO05D006383 6.1e-199 697.6 438 77.4
Prupe.8G179800 Prunus persica HOM05D005203 ORTHO05D006383 2.0e-194 682.6 443 77.4
CSS0012413 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 5.9e-194 681.0 437 75.1
Dinv41871 Davidia involucrata HOM05D005203 ORTHO05D006383 7.7e-194 680.6 436 75.9
GSVIVG01002028001 Vitis vinifera HOM05D005203 ORTHO05D006383 2.9e-193 678.7 433 76.7
Cc09_g10810 Coffea canephora HOM05D005203 ORTHO05D006383 1.4e-192 676.4 445 73.9
MD10G1141600 Malus domestica HOM05D005203 ORTHO05D006383 1.4e-192 676.4 441 76.6
CANSAT25G3783 Cannabis sativa HOM05D005203 ORTHO05D006383 1.9e-192 676.0 439 75.6
CsaV3_7G001910 Cucumis sativus L. HOM05D005203 ORTHO05D006383 2.5e-192 675.6 437 75.3
TWI75G1664 Tripterygium wilfordii HOM05D005203 ORTHO05D006383 1.6e-191 672.9 438 74.7
Peaxi162Scf00362g00132 Petunia axillaris HOM05D005203 ORTHO05D006383 3.6e-191 671.8 452 72.8
Ciclev10028418m.g Citrus clementina HOM05D005203 ORTHO05D006383 6.1e-191 671.0 441 74.8
MELO3C013249.2 Cucumis melo HOM05D005203 ORTHO05D006383 1.4e-190 669.8 437 74.8
Potri.009G168000 Populus trichocarpa HOM05D005203 ORTHO05D006383 2.3e-190 669.1 438 74.7
Cfa005369 Carpinus fangiana HOM05D005203 ORTHO05D006383 8.8e-190 667.2 440 74.5
Potri.004G206900 Populus trichocarpa HOM05D005203 ORTHO05D006383 1.1e-189 666.8 439 74.3
Solyc01g112240.4 Solanum lycopersicum HOM05D005203 ORTHO05D006383 2.6e-189 665.6 440 72.3
ClCG02G003410 Citrullus lanatus HOM05D005203 ORTHO05D006383 3.3e-189 665.2 439 74.7
Dinv14173 Davidia involucrata HOM05D005203 ORTHO05D006383 4.4e-189 664.8 469 70.6
arahy.Tifrunner.gnm1.ann1.Z16TJ0 Arachis hypogaea HOM05D005203 ORTHO05D006383 7.4e-189 664.1 427 79.2
FvH4_2g16770 Fragaria vesca HOM05D005203 ORTHO05D006383 2.8e-188 662.1 443 74.5
Manes.11G110000 Manihot esculenta HOM05D005203 ORTHO05D006383 2.8e-188 662.1 438 74.9
RcHm_v2.0_Chr6g0280891 Rosa chinensis HOM05D005203 ORTHO05D006383 2.8e-188 662.1 439 74.7
MD05G1138700 Malus domestica HOM05D005203 ORTHO05D006383 3.7e-188 661.8 432 76.6
PSO210G4213 Papaver somniferum HOM05D005203 ORTHO05D006383 3.7e-188 661.8 438 74.4
Migut.B00006 Erythranthe guttata HOM05D005203 ORTHO05D006383 1.4e-187 659.8 437 73.0
Nn6g31681 Nelumbo nucifera HOM05D005203 ORTHO05D006383 1.4e-187 659.8 436 73.2
PSO170G2598 Papaver somniferum HOM05D005203 ORTHO05D006383 1.4e-187 659.8 438 74.2
Thecc.02G146000 Theobroma cacao HOM05D005203 ORTHO05D006383 1.8e-187 659.4 438 73.7
FAN15G3115 Fragaria x ananassa HOM05D005203 ORTHO05D006383 1.2e-186 656.8 443 73.6
MSTRG.19946 Avicennia marina HOM05D005203 ORTHO05D006383 4.5e-186 654.8 437 72.8
Atru.chr5.3533 Acer truncatum HOM05D005203 ORTHO05D006383 5.9e-186 654.4 441 73.7
FAN24G3349 Fragaria x ananassa HOM05D005203 ORTHO05D006383 5.9e-186 654.4 432 75.7
PGR042G0992 Punica granatum HOM05D005203 ORTHO05D006383 5.9e-186 654.4 435 73.8
FAN27G1508 Fragaria x ananassa HOM05D005203 ORTHO05D006383 1.0e-185 653.7 439 74.3
THA.LOC104824732 Tarenaya hassleriana HOM05D005203 ORTHO05D006383 1.7e-185 652.9 439 72.2
Aqoxy5G00999 Aquilegia oxysepala HOM05D005203 ORTHO05D006383 1.1e-184 650.2 437 72.8
Eucgr.H04989 Eucalyptus grandis HOM05D005203 ORTHO05D006383 2.5e-184 649.0 443 72.5
Thhalv10025208m.g Eutrema salsugineum HOM05D005203 ORTHO05D006383 7.2e-184 647.5 432 72.0
HanXRQChr15g0476431 Helianthus annuus HOM05D005203 ORTHO05D006383 9.4e-184 647.1 440 70.5
Gohir.D12G014000 Gossypium hirsutum HOM05D005203 ORTHO05D006383 6.1e-183 644.4 438 71.5
Gorai.008G014000 Gossypium raimondii HOM05D005203 ORTHO05D006383 1.8e-182 642.9 439 71.1
Lsat_1_v5_gn_3_48560 Lactuca sativa HOM05D005203 ORTHO05D006383 6.7e-182 641.0 424 72.2
Sp7g37480 Schrenkiella parvula HOM05D005203 ORTHO05D006383 6.7e-182 641.0 437 70.3
Carub.0007s0018 Capsella rubella HOM05D005203 ORTHO05D006383 1.1e-181 640.2 440 70.2
Gohir.A12G013200 Gossypium hirsutum HOM05D005203 ORTHO05D006383 2.0e-181 639.4 438 71.0
Nitab4.5_0000783g0090 Nicotiana tabacum HOM05D005203 ORTHO05D006383 1.7e-180 636.3 464 68.3
Lsat_1_v5_gn_4_71380 Lactuca sativa HOM05D005203 ORTHO05D006383 2.8e-180 635.6 433 69.1
Sed0018804 Sechium edule HOM05D005203 ORTHO05D006383 4.8e-180 634.8 437 71.6
AT4G38240 Arabidopsis thaliana HOM05D005203 ORTHO05D006383 1.8e-179 632.9 438 69.6
AL7G10160 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 4.5e-178 628.2 438 69.6
ECA246G3822 Erigeron canadensis HOM05D005203 ORTHO05D006383 1.7e-177 626.3 438 68.5
ECA234G1180 Erigeron canadensis HOM05D005203 ORTHO05D006383 1.5e-176 623.2 433 69.5
BolC7t46794H Brassica oleracea HOM05D005203 ORTHO05D006383 1.9e-176 622.9 458 66.2
BNapus_Darmor_BZH_scaffold_146p00070 Brassica napus HOM05D005203 ORTHO05D006383 1.6e-175 619.8 435 68.7
HanXRQChr10g0298431 Helianthus annuus HOM05D005203 ORTHO05D006383 2.1e-175 619.4 440 68.2
CARHR294030 Cardamine hirsuta HOM05D005203 ORTHO05D006383 2.3e-174 615.9 438 68.7
CiPaw.05G093000 Carya illinoinensis HOM05D005203 ORTHO05D006383 3.3e-173 612.1 451 69.6
BraA06t27778Z Brassica rapa HOM05D005203 ORTHO05D006383 3.7e-172 608.6 446 66.8
MBI05_g33297_MAGBIO Magnolia biondii HOM05D005203 ORTHO05D006383 7.0e-171 604.4 415 71.6
Os02g0832800 Oryza sativa ssp. japonica HOM05D005203 ORTHO05D006383 3.5e-170 602.1 437 66.8
Sc18g0005820 Simmondsia chinensis HOM05D005203 ORTHO05D006383 1.0e-169 600.5 403 71.0
Psat5g000480 Pisum sativum HOM05D005203 ORTHO05D006383 2.9e-169 599.0 361 80.3
SalBow1G5214 Salvia bowleyana HOM05D005203 ORTHO05D006383 9.8e-165 583.9 403 71.5
Actinidia20576 Actinidia chinensis HOM05D005203 ORTHO05D006383 1.7e-164 583.2 418 68.9
Cpa.g.c28580 Carica papaya HOM05D005203 ORTHO05D006383 4.8e-164 581.6 423 68.6
Aa31LG6G16700 Aethionema arabicum HOM05D005203 ORTHO05D006383 7.0e-163 577.8 406 68.5
BcaNung01996 Brassica carinata HOM05D005203 ORTHO05D006383 4.7e-159 565.1 429 65.7
SMO201G0157 Selaginella moellendorffii HOM05D005203 ORTHO05D006383 2.7e-154 549.3 435 63.0
Eucgr.L00584 Eucalyptus grandis HOM05D005203 ORTHO05D006383 1.9e-152 543.1 345 74.8
CSS0022527 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 3.3e-152 542.3 387 69.5
CSS0021914 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 5.6e-152 541.6 387 69.0
Haze_02001 Corylus avellana HOM05D005203 ORTHO05D006383 3.6e-151 538.9 350 74.9
vmacro02339 Vaccinium macrocarpon HOM05D005203 ORTHO05D006383 2.3e-145 519.6 655 46.3
Zm00001eb421090 Zea mays HOM05D005203 ORTHO05D006383 1.9e-144 516.5 383 65.5
Sabra09G0130500 Salix brachista HOM05D005203 ORTHO05D006383 4.3e-144 515.4 424 64.6
Oeu006117.1 Olea europaea HOM05D005203 ORTHO05D006383 2.1e-143 513.1 338 72.2
SGA_v2.0_scaffold399G50809 Striga asiatica HOM05D005203 ORTHO05D006383 1.4e-139 500.4 486 56.8
Sabra04G0139200 Salix brachista HOM05D005203 ORTHO05D006383 1.0e-137 494.2 434 60.8
Pp3c22_17330 Physcomitrium patens HOM05D005203 ORTHO05D006383 2.8e-135 486.1 438 56.6
Mapoly0041s0049 Marchantia polymorpha HOM05D005203 ORTHO05D006383 2.3e-134 483.0 429 56.2
Cfa005368 Carpinus fangiana HOM05D005203 ORTHO05D006383 5.2e-134 481.9 326 73.0
Aa31LG1G14200 Aethionema arabicum HOM05D005203 ORTHO05D006383 6.8e-134 481.5 416 60.6
HPP92_004948 Vanilla planifolia HOM05D005203 ORTHO05D006383 6.4e-132 474.9 422 58.5
DCAR_026076 Daucus carota HOM05D005203 ORTHO05D006383 1.1e-131 474.2 387 60.7
VMungo1309G0298 Vigna mungo HOM05D005203 ORTHO05D006383 4.1e-131 472.2 278 86.0
HPP92_022155 Vanilla planifolia HOM05D005203 ORTHO05D006383 2.7e-130 469.5 425 56.9
Medtr3g118520 Medicago truncatula HOM05D005203 ORTHO05D006383 2.5e-128 463.0 273 84.2
Lj5A171G136 Lonicera japonica HOM05D005203 ORTHO05D006383 3.4e-125 452.6 272 79.0
AagrBONN_evm.TU.Sc2ySwM_362.2915 Anthoceros agrestis HOM05D005203 ORTHO05D006383 3.8e-124 449.1 446 55.2
TAR376G0977 Trochodendron aralioides HOM05D005203 ORTHO05D006383 1.9e-123 446.8 425 56.2
QL11p056319 Quercus lobata HOM05D005203 ORTHO05D006383 2.7e-122 443.0 278 77.0
Rhsim11G0198000 Rhododendron simsii HOM05D005203 ORTHO05D006383 1.6e-119 433.7 376 60.1
AUR62013174 Chenopodium quinoa HOM05D005203 ORTHO05D006383 2.2e-116 423.3 428 54.7
Sopen01g054300 Solanum pennellii HOM05D005203 ORTHO05D006383 7.8e-114 414.8 274 72.3
Pp3c12_4490 Physcomitrium patens HOM05D005203 ORTHO05D006383 5.1e-113 412.1 363 55.4
EL10Ac9g21529 Beta vulgaris HOM05D005203 ORTHO05D006383 3.8e-108 396.0 422 52.6
ATR0807G194 Amborella trichopoda HOM05D005203 ORTHO05D006383 3.9e-105 386.0 273 68.5
COL.COLO4_19776 Corchorus olitorius HOM05D005203 ORTHO05D006383 2.5e-104 383.3 424 52.1
CBR_g40811 Chara braunii HOM05D005203 ORTHO05D006383 3.4e-101 372.9 453 43.9
AUR62010173 Chenopodium quinoa HOM05D005203 ORTHO05D006383 1.9e-99 367.1 423 48.2
TAR628G1330 Trochodendron aralioides HOM05D005203 ORTHO05D006383 3.0e-97 359.8 405 50.6
Hund06364 Selenicereus undatus HOM05D005203 ORTHO05D006383 2.5e-96 356.7 388 50.8
CDE07G0143 Ceratophyllum demersum HOM05D005203 ORTHO05D006383 5.3e-94 349.0 274 61.3
CAN.G1725.2 Capsicum annuum HOM05D005203 ORTHO05D006383 1.6e-87 327.4 204 75.0
PGSC0003DMG402014680 Solanum tuberosum HOM05D005203 ORTHO05D006383 7.7e-85 318.5 204 71.6
MCO10G329 Micromonas commoda HOM05D005203 ORTHO05D006383 8.8e-73 278.5 330 45.5
CSS0033501 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 3.8e-68 263.1 165 74.5
CSS0046634 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 3.8e-68 263.1 165 74.5
Eucgr.L00583 Eucalyptus grandis HOM05D005203 ORTHO05D006383 1.1e-67 261.5 152 79.6
CSS0007702 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 7.2e-67 258.8 165 73.3
ATR0807G110 Amborella trichopoda HOM05D005203 ORTHO05D006383 2.6e-61 240.4 150 75.3
Ah.01g009970 Amaranthus hybridus HOM05D005203 ORTHO05D006383 6.1e-58 229.2 173 65.3
Medtr3g118525 Medicago truncatula HOM05D005203 ORTHO05D006383 3.4e-56 223.4 127 86.6
VMungo1309G1049 Vigna mungo HOM05D005203 ORTHO05D006383 3.4e-56 223.4 128 82.0
QL11p056323 Quercus lobata HOM05D005203 ORTHO05D006383 4.2e-51 206.5 124 77.4
Eucgr.H04987 Eucalyptus grandis HOM05D005203 ORTHO05D006383 3.7e-47 193.4 127 71.7
Lj5A171G135 Lonicera japonica HOM05D005203 ORTHO05D006383 7.0e-46 189.1 129 75.2
CDE07G2075 Ceratophyllum demersum HOM05D005203 ORTHO05D006383 2.1e-42 177.6 123 65.0
GSVIVG01002907001 Vitis vinifera HOM05D005203 ORTHO05D006383 3.0e-41 173.7 94 86.2
MCO01G683 Micromonas commoda HOM05D005203 ORTHO05D006383 7.3e-35 152.5 269 33.5
Nitab4.5_0010601g0030 Nicotiana tabacum HOM05D005203 ORTHO05D006383 1.7e-31 141.4 175 47.4
CANSAT78G0806 Cannabis sativa HOM05D005203 ORTHO05D006383 2.2e-31 141.0 105 65.7
AL7G13060 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 5.4e-30 136.3 99 65.7
Sc18g0005790 Simmondsia chinensis HOM05D005203 ORTHO05D006383 1.6e-29 134.8 95 65.3
PGSC0003DMG403014680 Solanum tuberosum HOM05D005203 ORTHO05D006383 2.7e-29 134.0 101 64.4
Sed0000358 Sechium edule HOM05D005203 ORTHO05D006383 4.0e-25 120.2 108 56.5
GSVIVG01002825001 Vitis vinifera HOM05D005203 ORTHO05D006383 2.8e-18 97.4 64 76.6
PGSC0003DMG401014680 Solanum tuberosum HOM05D005203 ORTHO05D006383 8.1e-18 95.9 66 77.3
CAN.G1725.1 Capsicum annuum HOM05D005203 ORTHO05D006383 3.1e-17 94.0 63 77.8
SEGI_16108 Sequoiadendron giganteum HOM05D005203 ORTHO05D006383 4.4e-16 90.1 70 55.7
AL6G14740 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 7.8e-13 79.3 45 80.0
CAN.G533.11 Capsicum annuum HOM05D005203 ORTHO05D006383 2.8e-10 70.9 45 64.4


User provided reference genes

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