Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr08g0246851 Lupinus albus HOM05D003937 ORTHO05D004583 2.7e-138 495.4 255 100.0
Phvul.006G042500 Phaseolus vulgaris HOM05D003937 ORTHO05D004583 2.0e-88 329.7 285 69.5
Glyma.06G000500 Glycine max HOM05D003937 ORTHO05D004583 1.1e-86 323.9 290 67.6
Glyma.04G000700 Glycine max HOM05D003937 ORTHO05D004583 7.0e-86 321.2 290 67.6
TPR.G38537 Trifolium pratense HOM05D003937 ORTHO05D004583 1.2e-82 310.5 283 66.1
VMungo0540G0354 Vigna mungo HOM05D003937 ORTHO05D004583 3.0e-81 305.8 285 63.5
Medtr3g118500 Medicago truncatula HOM05D003937 ORTHO05D004583 1.2e-80 303.9 282 64.9
Lj1g0000413 Lotus japonicus HOM05D003937 ORTHO05D004583 8.3e-79 297.7 283 64.3
arahy.Tifrunner.gnm1.ann1.G18Z51 Arachis hypogaea HOM05D003937 ORTHO05D004583 2.1e-74 283.1 272 61.8
arahy.Tifrunner.gnm1.ann1.388DF8 Arachis hypogaea HOM05D003937 ORTHO05D004583 2.8e-74 282.7 272 61.4
Ca_16692_v3 Cicer arietinum L. HOM05D003937 ORTHO05D004583 2.5e-67 259.6 252 61.9
CiPaw.05G091700 Carya illinoinensis HOM05D003937 ORTHO05D004583 1.4e-57 227.3 269 51.7
arahy.Tifrunner.gnm1.ann1.BKYH70 Arachis hypogaea HOM05D003937 ORTHO05D004583 8.9e-57 224.6 257 54.5
arahy.Tifrunner.gnm1.ann1.13SVP6 Arachis hypogaea HOM05D003937 ORTHO05D004583 7.5e-56 221.5 216 61.1
Duzib052G0838 Durio zibethinus HOM05D003937 ORTHO05D004583 9.8e-56 221.1 262 52.3
Potri.009G166100 Populus trichocarpa HOM05D003937 ORTHO05D004583 6.4e-55 218.4 259 50.6
Lalb_Chr11g0061231 Lupinus albus HOM05D003937 ORTHO05D004583 1.2e-53 214.2 256 55.5
Manes.04G067300 Manihot esculenta HOM05D003937 ORTHO05D004583 6.0e-53 211.8 260 51.9
arahy.Tifrunner.gnm1.ann1.5851ZQ Arachis hypogaea HOM05D003937 ORTHO05D004583 3.0e-52 209.5 215 57.2
Thecc.02G044800 Theobroma cacao HOM05D003937 ORTHO05D004583 1.9e-51 206.8 267 49.8
Cfa005351 Carpinus fangiana HOM05D003937 ORTHO05D004583 2.5e-51 206.5 246 52.8
Duzib132G1231 Durio zibethinus HOM05D003937 ORTHO05D004583 5.6e-51 205.3 263 50.2
COL.COLO4_17933 Corchorus olitorius HOM05D003937 ORTHO05D004583 2.8e-50 203.0 257 50.2
QL11p055606 Quercus lobata HOM05D003937 ORTHO05D004583 3.6e-50 202.6 274 47.1
ClCG02G009960 Citrullus lanatus HOM05D003937 ORTHO05D004583 4.7e-50 202.2 273 48.7
Gohir.A03G209600 Gossypium hirsutum HOM05D003937 ORTHO05D004583 1.1e-49 201.1 268 50.4
Gohir.D02G231300 Gossypium hirsutum HOM05D003937 ORTHO05D004583 1.1e-49 201.1 268 50.4
Haze_02016 Corylus avellana HOM05D003937 ORTHO05D004583 3.1e-49 199.5 238 52.5
QL11p055907 Quercus lobata HOM05D003937 ORTHO05D004583 3.1e-49 199.5 274 46.7
Potri.004G205200 Populus trichocarpa HOM05D003937 ORTHO05D004583 5.2e-49 198.7 268 46.6
TAR625G1504 Trochodendron aralioides HOM05D003937 ORTHO05D004583 2.0e-48 196.8 254 49.6
arahy.Tifrunner.gnm1.ann1.2P21EX Arachis hypogaea HOM05D003937 ORTHO05D004583 5.8e-48 195.3 244 51.6
Dinv41880 Davidia involucrata HOM05D001927 ORTHO05D001972 9.9e-48 194.5 268 50.4
Atru.chr5.3549 Acer truncatum HOM05D003937 ORTHO05D004583 2.9e-47 193.0 269 47.2
Gohir.A01G174900 Gossypium hirsutum HOM05D003937 ORTHO05D004583 4.9e-47 192.2 264 47.3
Ciclev10028873m.g Citrus clementina HOM05D003937 ORTHO05D004583 6.4e-47 191.8 254 47.6
Gorai.005G258900 Gossypium raimondii HOM05D003937 ORTHO05D004583 1.4e-46 190.7 268 48.5
Hma1.2p1_0271F.1_g108900 Hydrangea macrophylla HOM05D003937 ORTHO05D004583 1.4e-46 190.7 270 50.0
TWI75G1612 Tripterygium wilfordii HOM05D003937 ORTHO05D004583 1.4e-46 190.7 256 49.2
Gohir.D01G166000 Gossypium hirsutum HOM05D003937 ORTHO05D004583 2.4e-46 189.9 264 47.0
Gorai.002G206500 Gossypium raimondii HOM05D003937 ORTHO05D004583 2.4e-46 189.9 264 47.0
CSS0036568 Camellia sinensis var. sinensis HOM05D003937 ORTHO05D004583 2.7e-45 186.4 256 48.8
CsaV3_6G010160 Cucumis sativus L. HOM05D003937 ORTHO05D004583 7.8e-45 184.9 273 45.1
CANSAT25G1327 Cannabis sativa HOM05D003937 ORTHO05D004583 2.3e-44 183.3 255 49.0
Sabra04G0138500 Salix brachista HOM05D003937 ORTHO05D004583 3.9e-44 182.6 250 46.4
MD05G1134400 Malus domestica HOM05D003937 ORTHO05D004583 3.6e-42 176.0 258 46.9
Cpa.g.sc20.204 Carica papaya HOM05D003937 ORTHO05D004583 8.1e-42 174.9 261 47.5
Psat5g000520 Pisum sativum HOM05D003937 ORTHO05D004583 1.1e-41 174.5 220 51.8
Sed0010938 Sechium edule HOM05D003937 ORTHO05D004583 5.2e-41 172.2 256 45.3
MD10G1139500 Malus domestica HOM05D003937 ORTHO05D004583 5.8e-40 168.7 263 45.6
TAR381G0291 Trochodendron aralioides HOM05D003937 ORTHO05D004583 5.8e-40 168.7 255 45.1
Prupe.8G178200 Prunus persica HOM05D003937 ORTHO05D004583 1.4e-38 164.1 264 43.9
Dinv14164 Davidia involucrata HOM05D001927 ORTHO05D001972 2.4e-38 163.3 276 46.0
Nn5g30963 Nelumbo nucifera HOM05D003937 ORTHO05D004583 9.3e-38 161.4 261 44.4
EL10Ac9g21245 Beta vulgaris HOM05D003937 ORTHO05D004583 3.5e-37 159.5 262 42.0
PGR142G1962 Punica granatum HOM05D003937 ORTHO05D004583 7.8e-37 158.3 263 45.6
TWI79G1491 Tripterygium wilfordii HOM05D003937 ORTHO05D004583 1.3e-36 157.5 239 44.4
RcHm_v2.0_Chr6g0280681 Rosa chinensis HOM05D003937 ORTHO05D004583 3.6e-34 149.4 137 59.1
FAN27G2747 Fragaria x ananassa HOM05D003937 ORTHO05D004583 8.1e-34 148.3 140 58.6
FvH4_2g16620 Fragaria vesca HOM05D003937 ORTHO05D004583 1.4e-33 147.5 134 61.2
FAN15G3453 Fragaria x ananassa HOM05D003937 ORTHO05D004583 1.4e-33 147.5 134 61.2
FAN24G0691 Fragaria x ananassa HOM05D003937 ORTHO05D004583 1.4e-33 147.5 134 61.2
Eucgr.I01517 Eucalyptus grandis HOM05D003937 ORTHO05D004583 6.9e-33 145.2 245 44.1
FAN20G0177 Fragaria x ananassa HOM05D003937 ORTHO05D004583 9.0e-33 144.8 134 59.0
AUR62011702 Chenopodium quinoa HOM05D003937 ORTHO05D004583 3.4e-32 142.9 256 41.4
AUR62012919 Chenopodium quinoa HOM05D003937 ORTHO05D004583 4.4e-32 142.5 253 42.3
Rhsim05G0047600 Rhododendron simsii HOM05D003937 ORTHO05D004583 1.3e-31 141.0 256 41.4
arahy.Tifrunner.gnm1.ann1.X4XIB4 Arachis hypogaea HOM05D003937 ORTHO05D004583 2.9e-31 139.8 179 50.8
PSO541G3051 Papaver somniferum HOM05D003937 ORTHO05D004583 3.8e-31 139.4 254 44.5
CAN.G1725.8 Capsicum annuum HOM05D003937 ORTHO05D004583 1.2e-29 134.4 252 42.1
PSO675G5999 Papaver somniferum HOM05D003937 ORTHO05D004583 1.2e-29 134.4 252 42.9
Peaxi162Scf00362g00245 Petunia axillaris HOM05D003937 ORTHO05D004583 6.0e-29 132.1 245 40.8
Nitab4.5_0011212g0050 Nicotiana tabacum HOM05D003937 ORTHO05D004583 3.9e-28 129.4 233 41.6
PGSC0003DMG400014661 Solanum tuberosum HOM05D003937 ORTHO05D004583 6.6e-28 128.6 254 40.6
HanXRQChr12g0374421 Helianthus annuus HOM05D003937 ORTHO05D004583 1.9e-27 127.1 227 42.3
Actinidia32012 Actinidia chinensis HOM05D003937 ORTHO05D004583 3.3e-27 126.3 257 41.2
Aqoxy5G01031 Aquilegia oxysepala HOM05D003937 ORTHO05D004583 4.3e-27 125.9 247 41.7
vmacro17300 Vaccinium macrocarpon HOM05D003937 ORTHO05D004583 7.3e-27 125.2 245 39.6
Sopen01g054230 Solanum pennellii HOM05D003937 ORTHO05D004583 1.3e-26 124.4 248 39.1
SalBow1G5464 Salvia bowleyana HOM05D003937 ORTHO05D004583 2.1e-26 123.6 262 38.5
Solyc01g112180.4 Solanum lycopersicum HOM05D003937 ORTHO05D004583 4.8e-26 122.5 248 38.7
Oeu003435.2 Olea europaea HOM05D003937 ORTHO05D004583 6.2e-26 122.1 209 43.1
GSVIVG01023888001 Vitis vinifera HOM05D003937 ORTHO05D004583 1.1e-25 121.3 114 58.8
Nitab4.5_0000783g0190 Nicotiana tabacum HOM05D003937 ORTHO05D004583 2.4e-25 120.2 228 42.1
Hund06165 Selenicereus undatus HOM05D003937 ORTHO05D004583 2.4e-25 120.2 238 39.9
Sc18g0006030 Simmondsia chinensis HOM05D003937 ORTHO05D004583 1.2e-24 117.9 247 41.3
Migut.B00012 Erythranthe guttata HOM05D003937 ORTHO05D004583 9.9e-24 114.8 274 37.2
DCAR_015663 Daucus carota HOM05D003937 ORTHO05D004583 3.8e-23 112.8 230 40.4
SGA_v2.0_scaffold32G13344 Striga asiatica HOM05D003937 ORTHO05D004583 3.8e-23 112.8 207 40.6
Prupe.5G011500 Prunus persica HOM05D003937 ORTHO05D004583 4.9e-23 112.5 254 37.8
Lj4A806T76 Lonicera japonica HOM05D003937 ORTHO05D004583 2.4e-22 110.2 255 35.7
Aqoxy6G01687 Aquilegia oxysepala HOM05D003937 ORTHO05D004583 5.4e-22 109.0 243 38.3
GSVIVG01026659001 Vitis vinifera HOM05D003937 ORTHO05D004583 1.6e-21 107.5 133 48.1
QL02p014402 Quercus lobata HOM05D003937 ORTHO05D004583 2.7e-21 106.7 246 37.0
MSTRG.16955 Avicennia marina HOM05D003937 ORTHO05D004583 3.5e-21 106.3 256 35.2
RcHm_v2.0_Chr7g0215391 Rosa chinensis HOM05D003937 ORTHO05D004583 1.8e-20 104.0 265 32.8
MD06G1009100 Malus domestica HOM05D003937 ORTHO05D004583 2.3e-20 103.6 254 36.2
Rhsim07G0256300 Rhododendron simsii HOM05D003937 ORTHO05D004583 3.9e-20 102.8 250 34.4
AT4G38280 Arabidopsis thaliana HOM05D003937 ORTHO05D004583 1.5e-19 100.9 192 38.0
Cc10_g00590 Coffea canephora HOM05D003937 ORTHO05D004583 1.9e-19 100.5 246 34.6
FvH4_5g25250 Fragaria vesca HOM05D003937 ORTHO05D004583 1.9e-19 100.5 248 34.3
MBI08_g12714_MAGBIO Magnolia biondii HOM05D003937 ORTHO05D004583 3.3e-19 99.8 115 50.4
ECA233G2935 Erigeron canadensis HOM05D003937 ORTHO05D004583 5.6e-19 99.0 227 36.6
Cfa014094 Carpinus fangiana HOM05D003937 ORTHO05D004583 9.6e-19 98.2 250 34.8
CAN.G311.122 Capsicum annuum HOM05D003937 ORTHO05D004583 2.1e-18 97.1 254 33.9
Sp7g37440 Schrenkiella parvula HOM05D003937 ORTHO05D004583 2.8e-18 96.7 215 35.3
Nn6g31719 Nelumbo nucifera HOM05D003937 ORTHO05D004583 3.7e-18 96.3 124 49.2
Nitab4.5_0000588g0020 Nicotiana tabacum HOM05D003937 ORTHO05D004583 3.7e-18 96.3 262 32.8
HPP92_021046 Vanilla planifolia HOM05D003937 ORTHO05D004583 8.1e-18 95.1 217 39.6
Thhalv10026442m.g Eutrema salsugineum HOM05D003937 ORTHO05D004583 1.1e-17 94.7 210 36.7
Solyc04g082450.3 Solanum lycopersicum HOM05D003937 ORTHO05D004583 1.1e-17 94.7 256 32.4
ATR0661G493 Amborella trichopoda HOM05D003937 ORTHO05D004583 1.4e-17 94.4 139 44.6
AL7G10200 Arabidopsis lyrata HOM05D003937 ORTHO05D004583 4.0e-17 92.8 81 60.5
Sopen04g036060 Solanum pennellii HOM05D003937 ORTHO05D004583 4.0e-17 92.8 256 32.0
Aa31LG6G16740 Aethionema arabicum HOM05D003937 ORTHO05D004583 6.9e-17 92.0 194 37.6
vmacro04409 Vaccinium macrocarpon HOM05D003937 ORTHO05D004583 6.9e-17 92.0 242 33.1
AT2G45250 Arabidopsis thaliana HOM05D003937 ORTHO05D004583 9.0e-17 91.7 78 61.5
Oeu033835.1 Olea europaea HOM05D003937 ORTHO05D004583 9.0e-17 91.7 237 36.7
Cc09_g10730 Coffea canephora HOM05D003937 ORTHO05D004583 2.6e-16 90.1 108 51.9
Carub.0007s0022 Capsella rubella HOM05D003937 ORTHO05D004583 4.5e-16 89.4 114 50.0
MSTRG.22102 Avicennia marina HOM05D003937 ORTHO05D004583 5.8e-16 89.0 250 33.6
MSTRG.24495 Avicennia marina HOM05D003937 ORTHO05D004583 1.0e-15 88.2 264 30.7
Oeu046353.1 Olea europaea HOM05D003937 ORTHO05D004583 2.9e-15 86.7 255 32.5
Haze_22797 Corylus avellana HOM05D003937 ORTHO05D004583 6.5e-15 85.5 234 35.9
Lsat_1_v5_gn_3_48780 Lactuca sativa HOM05D003937 ORTHO05D004583 1.1e-14 84.7 177 37.9
GSVIVG01009897001 Vitis vinifera HOM05D003937 ORTHO05D004583 1.1e-14 84.7 112 45.5
BraA08t34322Z Brassica rapa HOM05D003937 ORTHO05D004583 1.4e-14 84.3 81 58.0
DCAR_013923 Daucus carota HOM05D003937 ORTHO05D004583 1.4e-14 84.3 255 32.5
FAN04G2017 Fragaria x ananassa HOM05D003937 ORTHO05D004583 1.9e-14 84.0 233 33.5
SalBow6G3106 Salvia bowleyana HOM05D003937 ORTHO05D004583 1.9e-14 84.0 256 33.2
BolC3t20032H Brassica oleracea HOM05D003937 ORTHO05D004583 2.5e-14 83.6 78 61.5
Sed0014450 Sechium edule HOM05D003937 ORTHO05D004583 2.5e-14 83.6 251 33.9
FAN18G0752 Fragaria x ananassa HOM05D003937 ORTHO05D004583 5.5e-14 82.4 233 32.6
C03p77740 Brassica napus HOM05D003937 ORTHO05D004583 7.1e-14 82.0 78 60.3
BcaB03g12256 Brassica carinata HOM05D003937 ORTHO05D004583 9.3e-14 81.6 69 68.1
ECA246G4591 Erigeron canadensis HOM05D003937 ORTHO05D004583 9.3e-14 81.6 199 34.7
Migut.N02961 Erythranthe guttata HOM05D003937 ORTHO05D004583 1.2e-13 81.3 240 32.1
Haze_22798 Corylus avellana HOM05D003937 ORTHO05D004583 1.6e-13 80.9 240 33.3
Lj5P172T81 Lonicera japonica HOM05D003937 ORTHO05D004583 2.1e-13 80.5 173 38.2
FAN08G1258 Fragaria x ananassa HOM05D003937 ORTHO05D004583 2.7e-13 80.1 233 32.6
CANSAT25G1278 Cannabis sativa HOM05D003937 ORTHO05D004583 7.9e-13 78.6 242 33.5
Zm00001eb420050 Zea mays HOM05D003937 ORTHO05D004583 1.0e-12 78.2 212 34.4
ECA233G5124 Erigeron canadensis HOM05D003937 ORTHO05D004583 1.3e-12 77.8 236 31.4
A08p23700 Brassica napus HOM05D003937 ORTHO05D004583 3.0e-12 76.6 78 56.4
Actinidia37917 Actinidia chinensis HOM05D003937 ORTHO05D004583 5.1e-12 75.9 256 30.1
CDE05G2511 Ceratophyllum demersum HOM05D003937 ORTHO05D004583 8.7e-12 75.1 238 28.6
Lsat_1_v5_gn_8_26360 Lactuca sativa HOM05D003937 ORTHO05D004583 1.1e-11 74.7 68 55.9
Os09g0549400 Oryza sativa ssp. japonica HOM05D003937 ORTHO05D004583 1.1e-11 74.7 77 53.2
SEGI_28645 Sequoiadendron giganteum HOM05D003937 ORTHO05D004583 1.1e-11 74.7 221 31.2
MELO3C026537.2 Cucumis melo HOM05D003937 ORTHO05D004583 1.5e-11 74.3 250 33.6
PGSC0003DMG400009905 Solanum tuberosum HOM05D003937 ORTHO05D004583 1.5e-11 74.3 275 28.0
Dinv31951 Davidia involucrata HOM05D003937 ORTHO05D004583 4.3e-11 72.8 116 41.4
HanXRQChr13g0409731 Helianthus annuus HOM05D003937 ORTHO05D004583 7.4e-11 72.0 121 38.8
Os04g0136900 Oryza sativa ssp. japonica HOM05D003937 ORTHO05D004583 9.6e-11 71.6 75 49.3
DCAR_016775 Daucus carota HOM05D003937 ORTHO05D004583 1.3e-10 71.2 259 32.0
Zm00001eb104250 Zea mays HOM05D003937 ORTHO05D004583 1.3e-10 71.2 104 44.2
CARHR294070 Cardamine hirsuta HOM05D003937 ORTHO05D004583 2.8e-10 70.1 72 55.6
SGA_v2.0_scaffold364G49977 Striga asiatica HOM05D003937 ORTHO05D004583 3.7e-10 69.7 231 30.7
Aqoxy6G01688 Aquilegia oxysepala HOM05D003937 ORTHO05D004583 4.8e-10 69.3 238 31.5
SGA_v2.0_scaffold58G20314 Striga asiatica HOM05D003937 ORTHO05D004583 1.8e-09 67.4 173 33.5
CDE06G0218 Ceratophyllum demersum HOM05D003937 ORTHO05D004583 2.4e-09 67.0 89 43.8
HanXRQChr12g0367561 Helianthus annuus HOM05D003937 ORTHO05D004583 3.1e-09 66.6 85 43.5
AagrBONN_evm.TU.Sc2ySwM_117.297 Anthoceros agrestis HOM05D003937 ORTHO05D004583 6.9e-09 65.5 138 31.9
CsaV3_6G031550 Cucumis sativus L. HOM05D003937 ORTHO05D004583 6.9e-09 65.5 239 32.6
HPP92_020992 Vanilla planifolia HOM05D003937 ORTHO05D004583 1.2e-08 64.7 191 34.6
HPP92_025977 Vanilla planifolia HOM05D003937 ORTHO05D004583 3.4e-08 63.2 69 50.7
vmacro08750 Vaccinium macrocarpon HOM05D003937 ORTHO05D004583 5.8e-08 62.4 65 52.3
CDE06G2177 Ceratophyllum demersum HOM05D003937 ORTHO05D004583 7.6e-08 62.0 123 39.8
unitig_8.g3603 Utricularia gibba HOM05D000001 ORTHO05D000003 1.0e-07 61.6 228 29.4
Pp3c19_6980 Physcomitrium patens HOM05D003937 ORTHO05D004583 1.3e-07 61.2 201 30.3
CDE05G1352 Ceratophyllum demersum HOM05D003937 ORTHO05D004583 1.7e-07 60.8 224 26.3
CiPaw.07G137900 Carya illinoinensis HOM05D003937 ORTHO05D004583 5.0e-07 59.3 80 45.0
SMO347G0358 Selaginella moellendorffii HOM05D003937 ORTHO05D004583 5.0e-07 59.3 169 31.4
ClCG08G009390 Citrullus lanatus HOM05D003937 ORTHO05D004583 1.4e-06 57.8 233 31.3


User provided reference genes

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