Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr08g0246011 Lupinus albus HOM05D008022 ORTHO05D010147 7.0e-73 277.3 155 100.0
Lj1g0009874 Lotus japonicus HOM05D008022 ORTHO05D010147 7.9e-32 141.0 83 73.5
Medtr1g023270 Medicago truncatula HOM05D008022 ORTHO05D010147 1.3e-26 123.6 82 67.1
Medtr3g113080 Medicago truncatula HOM05D008022 ORTHO05D010147 1.7e-26 123.2 75 70.7
Phvul.001G009600 Phaseolus vulgaris HOM05D008022 ORTHO05D010147 3.8e-26 122.1 79 64.6
TPR.G40293 Trifolium pratense HOM05D008022 ORTHO05D010147 1.9e-25 119.8 81 67.9
CiPaw.08G062600 Carya illinoinensis HOM05D008022 ORTHO05D010147 2.1e-24 116.3 80 65.0
Lj5g0000972 Lotus japonicus HOM05D008022 ORTHO05D010147 1.0e-23 114.0 76 65.8
Psat6g005360 Pisum sativum HOM05D008022 ORTHO05D010147 1.3e-23 113.6 77 62.3
Glyma.14G216600 Glycine max HOM05D008022 ORTHO05D010147 1.8e-23 113.2 76 63.2
Glyma.17G255200 Glycine max HOM05D008022 ORTHO05D010147 8.7e-23 110.9 74 60.8
arahy.Tifrunner.gnm1.ann1.RV6KDM Arachis hypogaea HOM05D008022 ORTHO05D010147 1.1e-22 110.5 77 63.6
Atru.chr13.362 Acer truncatum HOM05D008022 ORTHO05D010147 1.5e-22 110.2 79 63.3
Eucgr.F01845 Eucalyptus grandis HOM05D008022 ORTHO05D010147 1.5e-22 110.2 77 61.0
CiPaw.07G154400 Carya illinoinensis HOM05D008022 ORTHO05D010147 2.5e-22 109.4 85 57.6
Lalb_Chr22g0354471 Lupinus albus HOM05D008022 ORTHO05D010147 3.3e-22 109.0 75 64.0
Sed0002960 Sechium edule HOM05D008022 ORTHO05D010147 3.3e-22 109.0 91 56.0
TWI12G0111 Tripterygium wilfordii HOM05D008022 ORTHO05D010147 4.3e-22 108.6 79 62.0
Potri.005G234601 Populus trichocarpa HOM05D008022 ORTHO05D010147 7.4e-22 107.8 56 76.8
CsaV3_7G006070 Cucumis sativus L. HOM05D008022 ORTHO05D010147 9.6e-22 107.5 82 62.2
VMungo1309G0619 Vigna mungo HOM05D002906 ORTHO05D003211 1.3e-21 107.1 55 76.4
Gohir.A05G188500 Gossypium hirsutum HOM05D008022 ORTHO05D010147 3.7e-21 105.5 68 66.2
Gohir.D05G191600 Gossypium hirsutum HOM05D008022 ORTHO05D010147 3.7e-21 105.5 68 66.2
Gorai.009G196900 Gossypium raimondii HOM05D008022 ORTHO05D010147 2.4e-20 102.8 68 64.7
MD15G1017600 Malus domestica HOM05D008022 ORTHO05D010147 4.0e-20 102.1 53 75.5
CSS0048901 Camellia sinensis var. sinensis HOM05D008022 ORTHO05D010147 9.0e-20 100.9 55 74.5
Cfa013902 Carpinus fangiana HOM05D002906 ORTHO05D003211 1.2e-19 100.5 63 68.3
Manes.05G152650 Manihot esculenta HOM05D008022 ORTHO05D010147 2.0e-19 99.8 62 67.7
arahy.Tifrunner.gnm1.ann1.QUSF5W Arachis hypogaea HOM05D008022 ORTHO05D010147 2.6e-19 99.4 52 75.0
Nn5g29204 Nelumbo nucifera HOM05D008022 ORTHO05D010147 1.0e-18 97.4 80 56.2
Cpa.g.sc140.17 Carica papaya HOM05D008022 ORTHO05D010147 1.7e-18 96.7 63 63.5
CANSAT25G1466 Cannabis sativa HOM05D008022 ORTHO05D010147 2.2e-18 96.3 75 60.0
Nitab4.5_0000493g0010 Nicotiana tabacum HOM05D008022 ORTHO05D010147 2.2e-18 96.3 46 80.4
Lsat_1_v5_gn_7_91921 Lactuca sativa HOM05D008022 ORTHO05D010147 3.8e-18 95.5 76 56.6
ECA236G3926 Erigeron canadensis HOM05D008022 ORTHO05D010147 8.4e-18 94.4 79 55.7
Duzib041G0305 Durio zibethinus HOM05D008022 ORTHO05D010147 1.9e-17 93.2 42 88.1
FvH4_2g39010 Fragaria vesca HOM05D008022 ORTHO05D010147 3.2e-17 92.4 50 72.0
MELO3C018685.2 Cucumis melo HOM05D008022 ORTHO05D010147 7.1e-17 91.3 79 53.2
EL10Ac1g00558 Beta vulgaris HOM05D008022 ORTHO05D010147 1.2e-16 90.5 49 71.4
PGR031G0261 Punica granatum HOM05D008022 ORTHO05D010147 1.2e-16 90.5 72 56.9
Cc10_g02120 Coffea canephora HOM05D008022 ORTHO05D010147 4.6e-16 88.6 53 66.0
arahy.Tifrunner.gnm1.ann1.0AGT2R Arachis hypogaea HOM05D008022 ORTHO05D010147 1.0e-15 87.4 47 68.1
BraA07t31648Z Brassica rapa HOM05D008022 ORTHO05D010147 5.7e-14 81.6 77 48.1
BcaC08g47037 Brassica carinata HOM05D008022 ORTHO05D010147 2.8e-13 79.3 77 46.8
A07p41120 Brassica napus HOM05D008022 ORTHO05D010147 4.8e-13 78.6 77 46.8
BcaC08g47337 Brassica carinata HOM05D008022 ORTHO05D010147 6.3e-13 78.2 77 45.5
BcaC08g47338 Brassica carinata HOM05D008022 ORTHO05D010147 6.3e-13 78.2 77 45.5
Aqoxy6G02393 Aquilegia oxysepala HOM05D008022 ORTHO05D010147 8.2e-13 77.8 56 62.5
PSO541G2481 Papaver somniferum HOM05D008022 ORTHO05D010147 8.2e-13 77.8 45 66.7
FAN27G1447 Fragaria x ananassa HOM05D008022 ORTHO05D010147 1.4e-12 77.0 53 64.2
BcaC08g45567 Brassica carinata HOM05D008022 ORTHO05D010147 6.9e-12 74.7 77 46.8
C06p32520 Brassica napus HOM05D008022 ORTHO05D010147 6.9e-12 74.7 77 46.8
BolC6t38374H Brassica oleracea HOM05D008022 ORTHO05D010147 6.9e-12 74.7 77 46.8
HPP92_017807 Vanilla planifolia HOM05D008022 ORTHO05D010147 9.0e-12 74.3 68 50.0
A02p20010 Brassica napus HOM05D008022 ORTHO05D010147 1.5e-11 73.6 48 60.4
C02p34060 Brassica napus HOM05D008022 ORTHO05D010147 1.5e-11 73.6 48 60.4
BolC2t09304H Brassica oleracea HOM05D008022 ORTHO05D010147 1.5e-11 73.6 48 60.4
BraA02t07039Z Brassica rapa HOM05D008022 ORTHO05D010147 2.0e-11 73.2 78 46.2
AL2G35530 Arabidopsis lyrata HOM05D008022 ORTHO05D010147 3.4e-11 72.4 48 58.3
C06p49540 Brassica napus HOM05D008022 ORTHO05D010147 7.7e-11 71.2 77 44.2
BolC6t39993H Brassica oleracea HOM05D008022 ORTHO05D010147 7.7e-11 71.2 77 44.2
BcaB05g24920 Brassica carinata HOM05D008022 ORTHO05D010147 1.0e-10 70.9 48 58.3
Prupe.1G370900 Prunus persica HOM05D008022 ORTHO05D010147 1.0e-10 70.9 40 67.5
unitig_8.g4921 Utricularia gibba HOM05D008022 ORTHO05D010147 1.0e-10 70.9 75 44.0
BraA07t30517Z Brassica rapa HOM05D008022 ORTHO05D010147 1.3e-10 70.5 77 41.6
CARHR068950 Cardamine hirsuta HOM05D008022 ORTHO05D010147 1.3e-10 70.5 48 58.3
Carub.0002s2241 Capsella rubella HOM05D008022 ORTHO05D010147 8.5e-10 67.8 48 54.2
Phvul.009G014200 Phaseolus vulgaris HOM05D008022 ORTHO05D010147 1.4e-09 67.0 66 51.5
CDE02G3345 Ceratophyllum demersum HOM05D008022 ORTHO05D010147 1.2e-08 63.9 42 54.8
DCAR_017590 Daucus carota HOM05D000043 ORTHO05D000223 2.1e-08 63.2 45 57.8
Aqoxy5G01499 Aquilegia oxysepala HOM05D008022 ORTHO05D010147 1.1e-06 57.4 68 47.1


User provided reference genes

Program Settings