Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr08g0245901 Lupinus albus HOM05D004108 ORTHO05D004849 2.2e-73 278.9 140 100.0
Glyma.04G030900 Glycine max HOM05D004108 ORTHO05D004849 4.1e-56 221.5 137 81.0
Glyma.06G031000 Glycine max HOM05D004108 ORTHO05D004849 4.6e-55 218.0 137 79.6
Ca_13362_v3 Cicer arietinum L. HOM05D004108 ORTHO05D004849 4.9e-49 198.0 138 69.6
Glyma.17G251800 Glycine max HOM05D004108 ORTHO05D004849 5.4e-48 194.5 138 68.8
Lj5g0010725 Lotus japonicus HOM05D004108 ORTHO05D004849 9.2e-48 193.7 133 70.7
TPR.G20143 Trifolium pratense HOM05D004108 ORTHO05D004849 2.1e-47 192.6 138 69.6
Glyma.06G031100 Glycine max HOM05D004108 ORTHO05D004849 2.7e-47 192.2 136 72.8
Lj1g0012803 Lotus japonicus HOM05D004108 ORTHO05D004849 2.7e-47 192.2 136 66.9
Glyma.14G073200 Glycine max HOM05D004108 ORTHO05D004849 3.0e-46 188.7 134 67.2
Psat6g008240 Pisum sativum HOM05D004108 ORTHO05D004849 3.0e-46 188.7 139 68.3
Ca_15505_v3 Cicer arietinum L. HOM05D004108 ORTHO05D004849 7.3e-45 184.1 137 67.2
Medtr3g111970 Medicago truncatula HOM05D004108 ORTHO05D004849 6.2e-44 181.0 139 66.9
VMungo0647G0771 Vigna mungo HOM05D004108 ORTHO05D004849 4.0e-43 178.3 142 62.7
Psat5g012160 Pisum sativum HOM05D004108 ORTHO05D004849 1.2e-42 176.8 137 66.4
Medtr1g022395 Medicago truncatula HOM05D004108 ORTHO05D004849 3.4e-42 175.3 139 62.6
Phvul.001G013200 Phaseolus vulgaris HOM05D004108 ORTHO05D004849 2.9e-41 172.2 144 62.5
Phvul.009G058900 Phaseolus vulgaris HOM05D004108 ORTHO05D004849 4.9e-41 171.4 145 64.1
VMungo1309G0255 Vigna mungo HOM05D004108 ORTHO05D004849 4.2e-40 168.3 136 64.7
Thecc.08G029500 Theobroma cacao HOM05D004108 ORTHO05D004849 3.5e-39 165.2 142 55.6
TPR.G12369 Trifolium pratense HOM05D004108 ORTHO05D004849 3.0e-38 162.2 145 59.3
Lalb_Chr14g0369381 Lupinus albus HOM05D004108 ORTHO05D004849 3.3e-37 158.7 135 63.7
Manes.18G023000 Manihot esculenta HOM05D004108 ORTHO05D004849 1.3e-36 156.8 141 54.6
Duzib093G0346 Durio zibethinus HOM05D004108 ORTHO05D004849 2.1e-36 156.0 140 54.3
Potri.005G228600 Populus trichocarpa HOM05D004108 ORTHO05D004849 6.2e-36 154.5 143 56.6
CiPaw.15G080700 Carya illinoinensis HOM05D004108 ORTHO05D004849 1.8e-35 152.9 138 54.3
Duzib116G0345 Durio zibethinus HOM05D004108 ORTHO05D004849 3.1e-35 152.1 140 52.9
Gohir.A05G192800 Gossypium hirsutum HOM05D004108 ORTHO05D004849 4.0e-35 151.8 140 52.1
Gorai.002G127100 Gossypium raimondii HOM05D004108 ORTHO05D004849 5.3e-35 151.4 139 51.8
Ciclev10002766m.g Citrus clementina HOM05D004108 ORTHO05D004849 6.9e-35 151.0 138 55.1
Gohir.D01G103300 Gossypium hirsutum HOM05D004108 ORTHO05D004849 9.0e-35 150.6 139 51.8
Glyma.18G124300 Glycine max HOM05D004108 ORTHO05D004849 1.2e-34 150.2 110 73.6
COL.COLO4_26289 Corchorus olitorius HOM05D004108 ORTHO05D004849 1.5e-34 149.8 141 53.9
Gohir.D05G196000 Gossypium hirsutum HOM05D004108 ORTHO05D004849 2.0e-34 149.4 140 51.4
Gorai.009G200900 Gossypium raimondii HOM05D004108 ORTHO05D004849 2.0e-34 149.4 140 51.4
GSVIVG01009730001 Vitis vinifera HOM05D004108 ORTHO05D004849 5.8e-34 147.9 140 52.9
Sabra05G0176500 Salix brachista HOM05D004108 ORTHO05D004849 7.6e-34 147.5 131 55.0
Gohir.A01G114900 Gossypium hirsutum HOM05D004108 ORTHO05D004849 9.9e-34 147.1 139 53.2
Cfa018174 Carpinus fangiana HOM05D004108 ORTHO05D004849 6.4e-33 144.4 138 53.6
Gohir.A05G258800 Gossypium hirsutum HOM05D004108 ORTHO05D004849 9.3e-32 140.6 139 54.7
Gohir.D05G260600 Gossypium hirsutum HOM05D004108 ORTHO05D004849 1.2e-31 140.2 139 54.7
MSTRG.22304 Avicennia marina HOM05D004108 ORTHO05D004849 2.7e-31 139.0 137 55.5
Gorai.009G272400 Gossypium raimondii HOM05D004108 ORTHO05D004849 3.5e-31 138.7 138 53.6
Hma1.2p1_0203F.1_g086230 Hydrangea macrophylla HOM05D004108 ORTHO05D004849 7.9e-31 137.5 132 55.3
Rhsim06G0031200 Rhododendron simsii HOM05D004108 ORTHO05D004849 1.3e-30 136.7 138 50.7
Actinidia22531 Actinidia chinensis HOM05D004108 ORTHO05D004849 1.8e-30 136.3 145 51.0
TWI56G1092 Tripterygium wilfordii HOM05D004108 ORTHO05D004849 1.8e-30 136.3 144 48.6
Cc10_g02670 Coffea canephora HOM05D004108 ORTHO05D004849 3.9e-30 135.2 140 52.9
CsaV3_3G045320 Cucumis sativus L. HOM05D004108 ORTHO05D004849 3.9e-30 135.2 137 49.6
CSS0044578 Camellia sinensis var. sinensis HOM05D004108 ORTHO05D004849 8.7e-30 134.0 147 49.7
CSS0043508 Camellia sinensis var. sinensis HOM05D004108 ORTHO05D004849 1.1e-29 133.7 142 50.7
MELO3C003817.2 Cucumis melo HOM05D004108 ORTHO05D004849 1.1e-29 133.7 137 48.9
DCAR_019539 Daucus carota HOM05D001676 ORTHO05D001539 1.5e-29 133.3 143 51.0
QL02p009008 Quercus lobata HOM05D004108 ORTHO05D004849 2.5e-29 132.5 137 50.4
Haze_17929 Corylus avellana HOM05D004108 ORTHO05D004849 3.3e-29 132.1 125 52.8
MSTRG.24284 Avicennia marina HOM05D004108 ORTHO05D004849 5.6e-29 131.3 136 53.7
PGR083G0993 Punica granatum HOM05D004108 ORTHO05D004849 5.6e-29 131.3 136 48.5
Nitab4.5_0002224g0100 Nicotiana tabacum HOM05D004108 ORTHO05D004849 2.1e-28 129.4 134 50.7
PGSC0003DMG400003688 Solanum tuberosum HOM05D004108 ORTHO05D004849 3.6e-28 128.6 134 50.0
Sopen04g034130 Solanum pennellii HOM05D004108 ORTHO05D004849 4.8e-28 128.3 134 50.0
Solyc04g080540.2 Solanum lycopersicum HOM05D004108 ORTHO05D004849 8.1e-28 127.5 134 49.3
ClCG08G014950 Citrullus lanatus HOM05D004108 ORTHO05D004849 1.1e-27 127.1 144 47.2
Eucgr.F01582 Eucalyptus grandis HOM05D004108 ORTHO05D004849 1.1e-27 127.1 134 50.7
TAR381G0780 Trochodendron aralioides HOM05D004108 ORTHO05D004849 1.1e-27 127.1 118 54.2
Oeu007023.1 Olea europaea HOM05D004108 ORTHO05D004849 1.8e-27 126.3 137 50.4
ATR0568G230 Amborella trichopoda HOM05D004108 ORTHO05D004849 2.4e-27 125.9 141 47.5
Aqoxy5G01593 Aquilegia oxysepala HOM05D004108 ORTHO05D004849 5.3e-27 124.8 148 45.9
Phvul.009G058800 Phaseolus vulgaris HOM05D004108 ORTHO05D004849 1.2e-26 123.6 136 50.7
CANSAT25G1850 Cannabis sativa HOM05D004108 ORTHO05D004849 3.4e-26 122.1 144 50.7
CANSAT25G0460 Cannabis sativa HOM05D004108 ORTHO05D004849 5.8e-26 121.3 138 51.4
Potri.002G034500 Populus trichocarpa HOM05D004108 ORTHO05D004849 7.6e-26 120.9 129 47.3
SGA_v2.0_scaffold326G48731 Striga asiatica HOM05D004108 ORTHO05D004849 1.3e-25 120.2 137 46.0
Sabra02G0027700 Salix brachista HOM05D004108 ORTHO05D004849 2.9e-25 119.0 137 46.0
EL10Ac1g00610 Beta vulgaris HOM05D004108 ORTHO05D004849 3.8e-25 118.6 142 42.3
AUR62003937 Chenopodium quinoa HOM05D004108 ORTHO05D004849 4.9e-25 118.2 135 46.7
AUR62014478 Chenopodium quinoa HOM05D004108 ORTHO05D004849 4.9e-25 118.2 135 46.7
Rhsim07G0240700 Rhododendron simsii HOM05D004108 ORTHO05D004849 4.9e-25 118.2 145 46.2
MELO3C010952.2 Cucumis melo HOM05D004108 ORTHO05D004849 6.4e-25 117.9 149 45.6
RhsimUnG0051600 Rhododendron simsii HOM05D004108 ORTHO05D004849 6.4e-25 117.9 136 46.3
Sed0024175 Sechium edule HOM05D004108 ORTHO05D004849 6.4e-25 117.9 144 45.8
Migut.N00486 Erythranthe guttata HOM05D004108 ORTHO05D004849 1.1e-24 117.1 130 48.5
Sed0010517 Sechium edule HOM05D004108 ORTHO05D004849 1.1e-24 117.1 134 46.3
Dinv36099 Davidia involucrata HOM05D004108 ORTHO05D004849 1.9e-24 116.3 119 50.4
Sc15g0007040 Simmondsia chinensis HOM05D004108 ORTHO05D004849 1.9e-24 116.3 138 48.6
Atru.chr13.446 Acer truncatum HOM05D004108 ORTHO05D004849 9.3e-24 114.0 136 44.9
CsaV3_2G028830 Cucumis sativus L. HOM05D004108 ORTHO05D004849 1.2e-23 113.6 147 45.6
THA.LOC104811375 Tarenaya hassleriana HOM05D004108 ORTHO05D004849 2.1e-23 112.8 133 47.4
Hund26890 Selenicereus undatus HOM05D004108 ORTHO05D004849 3.5e-23 112.1 144 38.2
Hund29908 Selenicereus undatus HOM05D004108 ORTHO05D004849 3.5e-23 112.1 144 38.2
HPP92_003110 Vanilla planifolia HOM05D004108 ORTHO05D004849 3.5e-23 112.1 136 46.3
MBI10_g18267_MAGBIO Magnolia biondii HOM05D004108 ORTHO05D004849 6.0e-23 111.3 124 46.8
arahy.Tifrunner.gnm1.ann1.9Q97AW Arachis hypogaea HOM05D004108 ORTHO05D004849 1.0e-22 110.5 134 48.5
CDE06G1682 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 1.8e-22 109.8 137 40.1
HanXRQChr05g0156841 Helianthus annuus HOM05D004108 ORTHO05D004849 1.8e-22 109.8 138 44.9
arahy.Tifrunner.gnm1.ann1.FG8SZ8 Arachis hypogaea HOM05D004108 ORTHO05D004849 2.3e-22 109.4 134 47.8
CDE02G0765 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 3.9e-22 108.6 141 41.1
FAN15G0289 Fragaria x ananassa HOM05D004108 ORTHO05D004849 5.1e-22 108.2 167 42.5
arahy.Tifrunner.gnm1.ann1.KZM1SZ Arachis hypogaea HOM05D004108 ORTHO05D004849 8.7e-22 107.5 101 56.4
arahy.Tifrunner.gnm1.ann1.RL39CN Arachis hypogaea HOM05D004108 ORTHO05D004849 8.7e-22 107.5 101 56.4
PSO675G8146 Papaver somniferum HOM05D004108 ORTHO05D004849 1.5e-21 106.7 143 42.7
ECA246G2053 Erigeron canadensis HOM05D004108 ORTHO05D004849 2.5e-21 105.9 142 42.3
MBI18_g38882_MAGBIO Magnolia biondii HOM05D004108 ORTHO05D004849 2.5e-21 105.9 138 45.7
Eucgr.F01583 Eucalyptus grandis HOM05D004108 ORTHO05D004849 3.3e-21 105.5 165 38.8
FAN27G1128 Fragaria x ananassa HOM05D004108 ORTHO05D004849 3.3e-21 105.5 148 43.2
Sp1g17400 Schrenkiella parvula HOM05D004108 ORTHO05D004849 3.3e-21 105.5 130 46.2
Prupe.1G377400 Prunus persica HOM05D004108 ORTHO05D004849 4.3e-21 105.1 128 46.1
Cpa.g.sc31.39 Carica papaya HOM05D004108 ORTHO05D004849 9.6e-21 104.0 116 48.3
Lsat_1_v5_gn_5_27881 Lactuca sativa HOM05D004108 ORTHO05D004849 1.3e-20 103.6 136 43.4
PSO541G2330 Papaver somniferum HOM05D004108 ORTHO05D004849 2.1e-20 102.8 143 41.3
FAN20G2373 Fragaria x ananassa HOM05D004108 ORTHO05D004849 2.8e-20 102.4 163 39.9
BcaB07g31980 Brassica carinata HOM05D004108 ORTHO05D004849 3.7e-20 102.1 130 44.6
FvH4_2g39630 Fragaria vesca HOM05D004108 ORTHO05D004849 3.7e-20 102.1 149 43.6
Lsat_1_v5_gn_4_117601 Lactuca sativa HOM05D004108 ORTHO05D004849 3.7e-20 102.1 131 48.9
Thhalv10009139m.g Eutrema salsugineum HOM05D004108 ORTHO05D004849 8.1e-20 100.9 133 44.4
MD08G1029700 Malus domestica HOM05D004108 ORTHO05D004849 1.1e-19 100.5 141 41.1
unitig_899.g15617 Utricularia gibba HOM05D004108 ORTHO05D004849 1.8e-19 99.8 145 41.4
A06p15710 Brassica napus HOM05D004108 ORTHO05D004849 5.3e-19 98.2 130 43.1
BcaC05g25839 Brassica carinata HOM05D004108 ORTHO05D004849 9.0e-19 97.4 130 43.1
BolC5t30510H Brassica oleracea HOM05D004108 ORTHO05D004849 9.0e-19 97.4 130 43.1
Carub.0001s1910 Capsella rubella HOM05D004108 ORTHO05D004849 9.0e-19 97.4 130 45.4
CARHR020100 Cardamine hirsuta HOM05D004108 ORTHO05D004849 1.2e-18 97.1 131 41.2
RcHm_v2.0_Chr6g0301271 Rosa chinensis HOM05D004108 ORTHO05D004849 1.2e-18 97.1 141 44.0
BraA06t24680Z Brassica rapa HOM05D004108 ORTHO05D004849 1.5e-18 96.7 130 42.3
C05p18030 Brassica napus HOM05D004108 ORTHO05D004849 2.0e-18 96.3 136 41.2
SEGI_02312 Sequoiadendron giganteum HOM05D004108 ORTHO05D004849 2.6e-18 95.9 149 39.6
DCAR_020978 Daucus carota HOM05D004108 ORTHO05D004849 4.5e-18 95.1 114 43.9
Rhsim06G0031500 Rhododendron simsii HOM05D004108 ORTHO05D004849 4.5e-18 95.1 116 45.7
AT1G19530 Arabidopsis thaliana HOM05D004108 ORTHO05D004849 1.0e-17 94.0 131 44.3
SEGI_15325 Sequoiadendron giganteum HOM05D004108 ORTHO05D004849 2.2e-17 92.8 149 38.3
AL1G32280 Arabidopsis lyrata HOM05D004108 ORTHO05D004849 2.9e-17 92.4 131 42.0
ClCG05G018840 Citrullus lanatus HOM05D004108 ORTHO05D004849 4.9e-17 91.7 101 47.5
Nitab4.5_0001759g0080 Nicotiana tabacum HOM05D004108 ORTHO05D004849 4.9e-17 91.7 99 49.5
HPP92_010562 Vanilla planifolia HOM05D004108 ORTHO05D004849 1.4e-16 90.1 135 41.5
Aqoxy3G01077 Aquilegia oxysepala HOM05D004108 ORTHO05D004849 1.9e-16 89.7 133 40.6
ECA232G2533 Erigeron canadensis HOM05D004108 ORTHO05D004849 2.5e-16 89.4 141 43.3
Aa31LG7G4180 Aethionema arabicum HOM05D004108 ORTHO05D004849 1.2e-15 87.0 130 38.5
Peaxi162Scf00303g00058 Petunia axillaris HOM05D004108 ORTHO05D004849 1.6e-15 86.7 105 48.6
Nn2g14293 Nelumbo nucifera HOM05D004108 ORTHO05D004849 3.5e-15 85.5 122 40.2
SEGI_30411 Sequoiadendron giganteum HOM05D004108 ORTHO05D004849 3.5e-15 85.5 146 38.4
Mapoly0085s0007 Marchantia polymorpha HOM05D004108 ORTHO05D004849 4.6e-15 85.1 133 34.6
Mapoly0203s0009 Marchantia polymorpha HOM05D004108 ORTHO05D004849 4.6e-15 85.1 129 37.2
Aqoxy3G01079 Aquilegia oxysepala HOM05D004108 ORTHO05D004849 6.0e-15 84.7 136 41.2
Mapoly0085s0006 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.0e-14 84.0 127 34.6
AagrBONN_evm.TU.Sc2ySwM_344.1816 Anthoceros agrestis HOM05D004108 ORTHO05D004849 5.1e-14 81.6 139 40.3
Actinidia38001 Actinidia chinensis HOM05D004108 ORTHO05D004849 6.7e-14 81.3 102 48.0
Os03g0826800 Oryza sativa ssp. japonica HOM05D004108 ORTHO05D004849 1.1e-13 80.5 140 36.4
HanXRQChr16g0501561 Helianthus annuus HOM05D004108 ORTHO05D004849 1.5e-13 80.1 129 39.5
Peaxi162Scf00020g01711 Petunia axillaris HOM05D004108 ORTHO05D004849 1.5e-13 80.1 92 47.8
Actinidia30825 Actinidia chinensis HOM05D004108 ORTHO05D004849 3.3e-13 79.0 74 52.7
CDE11G1036 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 4.3e-13 78.6 135 37.8
Mapoly0212s0008 Marchantia polymorpha HOM05D004108 ORTHO05D004849 4.3e-13 78.6 133 34.6
Hma1.2p1_0203F.1_g086240 Hydrangea macrophylla HOM05D004108 ORTHO05D004849 9.6e-13 77.4 100 50.0
CDE05G3574 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 1.3e-12 77.0 140 35.7
Mapoly0212s0007 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.3e-12 77.0 141 37.6
CSS0033768 Camellia sinensis var. sinensis HOM05D004108 ORTHO05D004849 2.8e-12 75.9 52 65.4
Mapoly0037s0069 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.1e-11 73.9 147 30.6
Mapoly0152s0035 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.1e-11 73.9 136 33.8
Mapoly0212s0009 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.4e-11 73.6 138 35.5
Sc02g0005700 Simmondsia chinensis HOM05D004108 ORTHO05D004849 2.4e-11 72.8 53 64.2
Pp3c16_7660 Physcomitrium patens HOM05D004108 ORTHO05D004849 9.0e-11 70.9 131 33.6
Mapoly0087s0044 Marchantia polymorpha HOM05D004108 ORTHO05D004849 2.6e-10 69.3 138 29.7
Pp3c20_22930 Physcomitrium patens HOM05D004108 ORTHO05D004849 1.3e-09 67.0 134 33.6
unitig_747.g21673 Utricularia gibba HOM05D004108 ORTHO05D004849 1.7e-09 66.6 133 35.3
SMO348G0043 Selaginella moellendorffii HOM05D004108 ORTHO05D004849 2.2e-09 66.2 153 34.6
PGSC0003DMG400005376 Solanum tuberosum HOM05D004108 ORTHO05D004849 3.8e-09 65.5 114 36.0
Mapoly0087s0045 Marchantia polymorpha HOM05D004108 ORTHO05D004849 8.5e-09 64.3 135 29.6
AUR62014477 Chenopodium quinoa HOM05D004108 ORTHO05D004849 2.5e-08 62.8 50 60.0
Nitab4.5_0004768g0030 Nicotiana tabacum HOM05D004108 ORTHO05D004849 1.2e-07 60.5 100 41.0
CARHR108000 Cardamine hirsuta HOM05D003374 ORTHO05D009470 3.6e-07 58.9 97 40.2
Actinidia29817 Actinidia chinensis HOM05D004108 ORTHO05D004849 6.1e-07 58.2 39 64.1
Thhalv10022897m.g Eutrema salsugineum HOM05D003374 ORTHO05D009470 7.9e-07 57.8 97 39.2
Sp3g31120 Schrenkiella parvula HOM05D003374 ORTHO05D009470 1.0e-06 57.4 97 39.2
AT2G17710 Arabidopsis thaliana HOM05D003374 ORTHO05D009470 2.3e-06 56.2 97 37.1
BcaB03g16544 Brassica carinata HOM05D003374 ORTHO05D009470 2.3e-06 56.2 97 38.1
C07p05580 Brassica napus HOM05D003374 ORTHO05D009470 2.3e-06 56.2 97 38.1
BraA07t28128Z Brassica rapa HOM05D003374 ORTHO05D009470 2.3e-06 56.2 97 38.1
Dinv08548 Davidia involucrata HOM05D003374 ORTHO05D009470 3.0e-06 55.8 110 27.3
MBI09_g46000_MAGBIO Magnolia biondii HOM05D003374 ORTHO05D009470 3.0e-06 55.8 108 32.4
AL3G50710 Arabidopsis lyrata HOM05D003374 ORTHO05D009470 3.9e-06 55.5 97 37.1
BcaC06g36303 Brassica carinata HOM05D003374 ORTHO05D009470 3.9e-06 55.5 97 37.1
Ciclev10026638m.g Citrus clementina HOM05D003374 ORTHO05D009470 5.1e-06 55.1 112 32.1
Medtr5g022970 Medicago truncatula HOM05D003374 ORTHO05D009470 5.1e-06 55.1 137 29.2
VMungo1215G1047 Vigna mungo HOM05D003374 ORTHO05D009470 5.1e-06 55.1 129 30.2
BolC7t40958H Brassica oleracea HOM05D003374 ORTHO05D009415 6.7e-06 54.7 97 37.1


User provided reference genes

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