Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr08g0245891 Lupinus albus HOM05D006278 ORTHO05D007526 1.2e-77 293.1 154 100.0
Glyma.17G251400 Glycine max HOM05D006278 ORTHO05D007526 5.3e-20 101.7 96 58.3
Glyma.14G073601 Glycine max HOM05D006278 ORTHO05D007526 1.5e-19 100.1 98 56.1
Phvul.001G013600 Phaseolus vulgaris HOM05D006278 ORTHO05D007526 3.4e-19 99.0 114 50.9
CSS0025999 Camellia sinensis var. sinensis HOM05D006278 ORTHO05D007526 1.3e-18 97.1 136 44.1
Medtr1g022365 Medicago truncatula HOM05D006278 ORTHO05D007526 2.2e-18 96.3 101 56.4
Psat6g008120 Pisum sativum HOM05D006278 ORTHO05D007526 2.2e-18 96.3 100 55.0
TPR.G20186 Trifolium pratense HOM05D006278 ORTHO05D007526 2.2e-18 96.3 103 53.4
Lj5g0016594 Lotus japonicus HOM05D006278 ORTHO05D007526 4.9e-18 95.1 106 52.8
Phvul.009G058700 Phaseolus vulgaris HOM05D006278 ORTHO05D007526 6.4e-18 94.7 183 39.9
TPR.G12310 Trifolium pratense HOM05D006278 ORTHO05D007526 6.4e-18 94.7 129 48.8
Ca_13364_v3 Cicer arietinum L. HOM05D006278 ORTHO05D007526 8.4e-18 94.4 128 46.1
Manes.05G158000 Manihot esculenta HOM05D006278 ORTHO05D007526 1.1e-17 94.0 140 43.6
Haze_13828 Corylus avellana HOM05D006278 ORTHO05D007526 1.4e-17 93.6 154 42.2
Lalb_Chr24g0398921 Lupinus albus HOM05D006278 ORTHO05D007526 1.4e-17 93.6 169 40.2
Medtr3g111950 Medicago truncatula HOM05D006278 ORTHO05D007526 1.9e-17 93.2 165 44.8
VMungo0647G1119 Vigna mungo HOM05D006278 ORTHO05D007526 1.9e-17 93.2 121 46.3
Psat5g012120 Pisum sativum HOM05D006278 ORTHO05D007526 3.2e-17 92.4 153 43.8
Potri.002G034700 Populus trichocarpa HOM05D006278 ORTHO05D007526 9.3e-17 90.9 142 47.2
Ca_15506_v3 Cicer arietinum L. HOM05D006278 ORTHO05D007526 1.2e-16 90.5 166 42.2
Sc02g0005980 Simmondsia chinensis HOM05D006278 ORTHO05D007526 1.2e-16 90.5 139 41.0
Nn2g14857 Nelumbo nucifera HOM05D006278 ORTHO05D007526 2.1e-16 89.7 135 43.7
Lj4P787T11 Lonicera japonica HOM05D006278 ORTHO05D007526 4.6e-16 88.6 149 41.6
Glyma.06G031201 Glycine max HOM05D006278 ORTHO05D007526 1.3e-15 87.0 165 43.0
Lj1g0002957 Lotus japonicus HOM05D006278 ORTHO05D007526 1.3e-15 87.0 178 39.3
arahy.Tifrunner.gnm1.ann1.K7D9EI Arachis hypogaea HOM05D006278 ORTHO05D007526 3.9e-15 85.5 143 44.1
COL.COLO4_26292 Corchorus olitorius HOM05D006278 ORTHO05D007526 3.9e-15 85.5 165 40.6
Sabra02G0027900 Salix brachista HOM05D006278 ORTHO05D007526 3.9e-15 85.5 144 43.8
Glyma.04G031100 Glycine max HOM05D006278 ORTHO05D007526 8.7e-15 84.3 179 40.2
Rhsim06G0031900 Rhododendron simsii HOM05D006278 ORTHO05D007526 8.7e-15 84.3 164 38.4
arahy.Tifrunner.gnm1.ann1.7TI70S Arachis hypogaea HOM05D006278 ORTHO05D007526 1.5e-14 83.6 170 40.0
TWI12G1431 Tripterygium wilfordii HOM05D006278 ORTHO05D007526 1.5e-14 83.6 170 38.2
Cfa008229 Carpinus fangiana HOM05D006278 ORTHO05D007526 1.9e-14 83.2 154 41.6
MSTRG.1269 Avicennia marina HOM05D006278 ORTHO05D007526 5.6e-14 81.6 116 45.7
Ciclev10000483m.g Citrus clementina HOM05D006278 ORTHO05D007526 5.6e-14 81.6 144 41.7
Dinv36098 Davidia involucrata HOM05D006278 ORTHO05D007526 9.6e-14 80.9 143 42.7
Dinv39433 Davidia involucrata HOM05D006278 ORTHO05D007526 9.6e-14 80.9 111 44.1
PSO541G0933 Papaver somniferum HOM05D006278 ORTHO05D007526 9.6e-14 80.9 161 37.9
Oeu049934.1 Olea europaea HOM05D006278 ORTHO05D007526 1.3e-13 80.5 173 39.9
DCAR_017552 Daucus carota HOM05D006278 ORTHO05D007526 1.6e-13 80.1 130 42.3
Duzib041G0028 Durio zibethinus HOM05D006278 ORTHO05D007526 1.6e-13 80.1 161 40.4
VMungo1309G1357 Vigna mungo HOM05D006278 ORTHO05D007526 1.6e-13 80.1 181 36.5
TAR376G1184 Trochodendron aralioides HOM05D006278 ORTHO05D007526 2.1e-13 79.7 99 50.5
CANSAT25G3418 Cannabis sativa HOM05D006278 ORTHO05D007526 2.8e-13 79.3 135 43.0
Gohir.D06G004900 Gossypium hirsutum HOM05D006278 ORTHO05D007526 2.8e-13 79.3 108 50.0
Gorai.010G009500 Gossypium raimondii HOM05D006278 ORTHO05D007526 2.8e-13 79.3 108 50.0
Aqoxy6G01136 Aquilegia oxysepala HOM05D006278 ORTHO05D007526 3.6e-13 79.0 141 39.0
TAR101G0003 Trochodendron aralioides HOM05D006278 ORTHO05D007526 3.6e-13 79.0 138 41.3
Gohir.A06G009400 Gossypium hirsutum HOM05D006278 ORTHO05D007526 4.8e-13 78.6 108 50.0
PSO675G3973 Papaver somniferum HOM05D006278 ORTHO05D007526 6.2e-13 78.2 161 37.3
Eucgr.F01578 Eucalyptus grandis HOM05D006278 ORTHO05D007526 8.1e-13 77.8 122 42.6
Atru.chr13.448 Acer truncatum HOM05D006278 ORTHO05D007526 1.1e-12 77.4 142 39.4
AL2G35180 Arabidopsis lyrata HOM05D006278 ORTHO05D007526 1.1e-12 77.4 113 44.2
MD15G1025500 Malus domestica HOM05D006278 ORTHO05D007526 1.4e-12 77.0 143 42.0
Nitab4.5_0000017g0170 Nicotiana tabacum HOM05D006278 ORTHO05D007526 1.4e-12 77.0 153 36.6
Cpa.g.sc3.303 Carica papaya HOM05D006278 ORTHO05D007526 1.8e-12 76.6 138 39.9
CiPaw.04G062900 Carya illinoinensis HOM05D006278 ORTHO05D007526 1.8e-12 76.6 153 37.3
MD08G1030100 Malus domestica HOM05D006278 ORTHO05D007526 1.8e-12 76.6 121 39.7
Peaxi162Scf00303g00043 Petunia axillaris HOM05D006278 ORTHO05D007526 1.8e-12 76.6 135 37.8
Actinidia15341 Actinidia chinensis HOM05D006278 ORTHO05D007526 2.4e-12 76.3 167 35.3
CANSAT35G1968 Cannabis sativa HOM05D006278 ORTHO05D007526 2.4e-12 76.3 177 33.3
Potri.005G228400 Populus trichocarpa HOM05D006278 ORTHO05D007526 4.0e-12 75.5 132 42.4
AUR62033855 Chenopodium quinoa HOM05D006278 ORTHO05D007526 6.9e-12 74.7 127 40.2
Duzib093G1165 Durio zibethinus HOM05D006278 ORTHO05D007526 6.9e-12 74.7 165 37.6
Nitab4.5_0004768g0010 Nicotiana tabacum HOM05D006278 ORTHO05D007526 9.0e-12 74.3 97 46.4
Prupe.1G377800 Prunus persica HOM05D006278 ORTHO05D007526 9.0e-12 74.3 114 40.4
Thecc.08G029100 Theobroma cacao HOM05D006278 ORTHO05D007526 1.2e-11 73.9 166 38.0
CiPaw.03G096900 Carya illinoinensis HOM05D006278 ORTHO05D007526 1.5e-11 73.6 127 40.9
Solyc04g080520.1 Solanum lycopersicum HOM05D006278 ORTHO05D007526 1.5e-11 73.6 140 38.6
Sopen04g034110 Solanum pennellii HOM05D006278 ORTHO05D007526 1.5e-11 73.6 140 37.9
AUR62041670 Chenopodium quinoa HOM05D006278 ORTHO05D007526 2.6e-11 72.8 127 39.4
Nitab4.5_0002224g0110 Nicotiana tabacum HOM05D006278 ORTHO05D007526 2.6e-11 72.8 137 38.0
TAR376G0700 Trochodendron aralioides HOM05D006278 ORTHO05D007526 3.4e-11 72.4 99 47.5
C06p49230 Brassica napus HOM05D006278 ORTHO05D007526 4.5e-11 72.0 110 42.7
CAN.G1226.35 Capsicum annuum HOM05D006278 ORTHO05D007526 4.5e-11 72.0 103 40.8
MBI10_g18263_MAGBIO Magnolia biondii HOM05D006278 ORTHO05D007526 4.5e-11 72.0 138 39.9
Sabra05G0176300 Salix brachista HOM05D006278 ORTHO05D007526 4.5e-11 72.0 134 39.6
Migut.O00967 Erythranthe guttata HOM05D006278 ORTHO05D007526 7.6e-11 71.2 94 40.4
Peaxi162Scf00020g00184 Petunia axillaris HOM05D006278 ORTHO05D007526 9.9e-11 70.9 136 36.8
Ah.05g169430 Amaranthus hybridus HOM05D006278 ORTHO05D007526 1.7e-10 70.1 129 34.9
FAN27G0814 Fragaria x ananassa HOM05D006278 ORTHO05D007526 1.7e-10 70.1 139 37.4
QL12p039628 Quercus lobata HOM05D006278 ORTHO05D007526 1.7e-10 70.1 118 39.0
PGR004G0534 Punica granatum HOM05D006278 ORTHO05D007526 2.2e-10 69.7 174 33.3
A07p40840 Brassica napus HOM05D006278 ORTHO05D007526 2.9e-10 69.3 109 42.2
TAR245G0008 Trochodendron aralioides HOM05D006278 ORTHO05D007526 2.9e-10 69.3 104 43.3
FAN20G2275 Fragaria x ananassa HOM05D006278 ORTHO05D007526 3.8e-10 68.9 108 40.7
TAR381G0716 Trochodendron aralioides HOM05D006278 ORTHO05D007526 3.8e-10 68.9 104 43.3
AT1G75260 Arabidopsis thaliana HOM05D006278 ORTHO05D007526 4.9e-10 68.6 96 42.7
CAN.G424.60 Capsicum annuum HOM05D006278 ORTHO05D007526 4.9e-10 68.6 153 35.9
BraA07t31626Z Brassica rapa HOM05D006278 ORTHO05D007526 6.4e-10 68.2 109 41.3
PGSC0003DMG400003686 Solanum tuberosum HOM05D006278 ORTHO05D007526 6.4e-10 68.2 105 38.1
FvH4_2g39641 Fragaria vesca HOM05D006278 ORTHO05D007526 8.4e-10 67.8 116 38.8
THA.LOC104809215 Tarenaya hassleriana HOM05D006278 ORTHO05D007526 1.1e-09 67.4 104 40.4
BcaC08g47365 Brassica carinata HOM05D006278 ORTHO05D007526 1.4e-09 67.0 142 38.0
BcaNung04385 Brassica carinata HOM05D006278 ORTHO05D007526 1.4e-09 67.0 161 34.2
BolC6t39956H Brassica oleracea HOM05D006278 ORTHO05D007526 1.4e-09 67.0 142 38.0
Oeu029831.2 Olea europaea HOM05D006278 ORTHO05D007526 1.4e-09 67.0 142 35.9
Sp5g30420 Schrenkiella parvula HOM05D006278 ORTHO05D007526 1.4e-09 67.0 112 39.3
CARHR068590 Cardamine hirsuta HOM05D006278 ORTHO05D007526 5.5e-09 65.1 140 34.3
ECA247G1288 Erigeron canadensis HOM05D006278 ORTHO05D007526 7.1e-09 64.7 106 41.5
PGSC0003DMG400005375 Solanum tuberosum HOM05D006278 ORTHO05D007526 7.1e-09 64.7 121 38.0
SGA_v2.0_scaffold201G41409 Striga asiatica HOM05D006278 ORTHO05D007526 7.1e-09 64.7 145 33.8
CDE04G1483 Ceratophyllum demersum HOM05D003484 ORTHO05D004152 1.2e-08 63.9 118 39.0
Aa31LG4G5490 Aethionema arabicum HOM05D006278 ORTHO05D007526 1.6e-08 63.5 160 33.8
Carub.0002s2208 Capsella rubella HOM05D006278 ORTHO05D007526 2.7e-08 62.8 139 33.1
SEGI_39042 Sequoiadendron giganteum HOM05D006278 ORTHO05D007526 2.7e-08 62.8 85 42.4
unitig_0.g2047 Utricularia gibba HOM05D006278 ORTHO05D007526 2.7e-08 62.8 85 37.6
Thhalv10018443m.g Eutrema salsugineum HOM05D006278 ORTHO05D007526 3.5e-08 62.4 106 37.7
ClCG08G014920 Citrullus lanatus HOM05D006278 ORTHO05D007526 4.6e-08 62.0 133 33.1
Medtr7g117980 Medicago truncatula HOM05D004242 ORTHO05D004349 6.0e-08 61.6 104 35.6
Sed0000803 Sechium edule HOM05D006278 ORTHO05D007526 6.0e-08 61.6 138 33.3
RcHm_v2.0_Chr6g0301251 Rosa chinensis HOM05D006278 ORTHO05D007526 1.0e-07 60.8 120 34.2
CDE02G1230 Ceratophyllum demersum HOM05D004242 ORTHO05D004349 1.8e-07 60.1 103 37.9
CDE06G2487 Ceratophyllum demersum HOM05D006278 ORTHO05D007526 2.3e-07 59.7 98 42.9
SEGI_20460 Sequoiadendron giganteum HOM05D004242 ORTHO05D004349 2.3e-07 59.7 102 36.3
Ca_09531_v3 Cicer arietinum L. HOM05D004242 ORTHO05D004349 3.0e-07 59.3 107 34.6
MBI13_g41464_MAGBIO Magnolia biondii HOM05D004242 ORTHO05D004349 3.0e-07 59.3 120 40.0
Nn5g29644 Nelumbo nucifera HOM05D006278 ORTHO05D007526 3.0e-07 59.3 124 32.3
PSO210G2709 Papaver somniferum HOM05D004242 ORTHO05D004349 3.9e-07 58.9 102 38.2
TPR.G4684 Trifolium pratense HOM05D004242 ORTHO05D004349 3.9e-07 58.9 106 34.0
Psat3g001320 Pisum sativum HOM05D004242 ORTHO05D004349 5.1e-07 58.5 108 35.2
Glyma.03G259500 Glycine max HOM05D004242 ORTHO05D004349 6.7e-07 58.2 113 32.7
CsaV3_2G028850 Cucumis sativus L. HOM05D006278 ORTHO05D007526 8.7e-07 57.8 114 33.3
CsaV3_6G008950 Cucumis sativus L. HOM05D004242 ORTHO05D004349 8.7e-07 57.8 118 32.2
Glyma.19G258400 Glycine max HOM05D004242 ORTHO05D004349 8.7e-07 57.8 98 34.7
Sed0025990 Sechium edule HOM05D004242 ORTHO05D004349 1.1e-06 57.4 90 37.8
Lalb_Chr04g0261391 Lupinus albus HOM05D004242 ORTHO05D004349 1.5e-06 57.0 127 30.7
ECA232G2514 Erigeron canadensis HOM05D006278 ORTHO05D007526 1.9e-06 56.6 143 35.0
Sc01g0002380 Simmondsia chinensis HOM05D004242 ORTHO05D004349 3.3e-06 55.8 127 33.9
ClCG06G002780 Citrullus lanatus HOM05D004242 ORTHO05D004349 4.3e-06 55.5 142 31.7
CiPaw.02G043100 Carya illinoinensis HOM05D004242 ORTHO05D004349 7.4e-06 54.7 100 40.0
Nitab4.5_0005697g0010 Nicotiana tabacum HOM05D004242 ORTHO05D004349 7.4e-06 54.7 99 38.4
Phvul.010G116800 Phaseolus vulgaris HOM05D004242 ORTHO05D004349 7.4e-06 54.7 111 34.2
CiPaw.02G043000 Carya illinoinensis HOM05D004242 ORTHO05D004349 9.6e-06 54.3 101 37.6
Nitab4.5_0000508g0190 Nicotiana tabacum HOM05D004242 ORTHO05D004349 9.6e-06 54.3 98 38.8


User provided reference genes

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