Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr08g0245211 Lupinus albus HOM05D007433 ORTHO05D009199 5.7e-56 220.7 114 100.0
Lalb_Chr11g0062981 Lupinus albus HOM05D007433 ORTHO05D009199 6.4e-39 164.1 121 75.2
Medtr3g103330 Medicago truncatula HOM05D007433 ORTHO05D009199 7.1e-30 134.0 114 72.8
Lj1g0004253 Lotus japonicus HOM05D007433 ORTHO05D009199 1.2e-29 133.3 120 68.3
Phvul.009G073600 Phaseolus vulgaris HOM05D007433 ORTHO05D009199 1.5e-27 126.3 120 65.0
TPR.G33670 Trifolium pratense HOM05D007433 ORTHO05D009199 1.6e-26 122.9 118 66.1
VMungo1309G0469 Vigna mungo HOM05D007433 ORTHO05D009199 1.6e-26 122.9 119 64.7
Psat5g037160 Pisum sativum HOM05D007433 ORTHO05D009199 1.8e-25 119.4 119 61.3
Glyma.06G048300 Glycine max HOM05D007433 ORTHO05D009199 4.0e-25 118.2 123 63.4
Potri.014G013600 Populus trichocarpa HOM05D007433 ORTHO05D009199 1.5e-24 116.3 110 62.7
Cfa013749 Carpinus fangiana HOM05D007433 ORTHO05D009199 2.9e-23 112.1 107 61.7
Dinv44935 Davidia involucrata HOM05D007433 ORTHO05D009199 2.9e-23 112.1 108 63.0
Glyma.04G047400 Glycine max HOM05D007433 ORTHO05D009199 2.9e-23 112.1 110 62.7
Thecc.08G085300 Theobroma cacao HOM05D007433 ORTHO05D009199 3.8e-23 111.7 111 64.0
Haze_06413 Corylus avellana HOM05D007433 ORTHO05D009199 1.1e-22 110.2 107 61.7
Actinidia29630 Actinidia chinensis HOM05D001492 ORTHO05D001400 3.2e-22 108.6 107 63.6
QL12p038428 Quercus lobata HOM05D007433 ORTHO05D009199 4.2e-22 108.2 117 57.3
Manes.05G183000 Manihot esculenta HOM05D007433 ORTHO05D009199 5.4e-22 107.8 106 56.6
GSVIVG01009308001 Vitis vinifera HOM05D007433 ORTHO05D009199 5.4e-22 107.8 106 60.4
CiPaw.07G172700 Carya illinoinensis HOM05D007433 ORTHO05D009199 7.1e-22 107.5 112 59.8
Hma1.2p1_1170F.1_g263410 Hydrangea macrophylla HOM05D007433 ORTHO05D009199 9.3e-22 107.1 109 61.5
Prupe.1G419900 Prunus persica HOM05D007433 ORTHO05D009199 9.3e-22 107.1 109 59.6
Gohir.A02G080400 Gossypium hirsutum HOM05D007433 ORTHO05D009199 2.1e-21 105.9 106 60.4
Gohir.D02G088300 Gossypium hirsutum HOM05D007433 ORTHO05D009199 2.1e-21 105.9 106 60.4
Gorai.005G098900 Gossypium raimondii HOM05D007433 ORTHO05D009199 2.1e-21 105.9 106 60.4
Potri.002G116200 Populus trichocarpa HOM05D007433 ORTHO05D009199 4.6e-21 104.8 110 60.0
Sed0005155 Sechium edule HOM05D007433 ORTHO05D009199 7.8e-21 104.0 114 57.0
COL.COLO4_28471 Corchorus olitorius HOM05D007433 ORTHO05D009199 1.3e-20 103.2 110 59.1
ClCG05G026590 Citrullus lanatus HOM05D007433 ORTHO05D009199 1.7e-20 102.8 109 59.6
Manes.18G048800 Manihot esculenta HOM05D007433 ORTHO05D009199 1.7e-20 102.8 108 58.3
Aqoxy6G02471 Aquilegia oxysepala HOM05D007433 ORTHO05D009199 2.3e-20 102.4 109 62.4
vmacro04593 Vaccinium macrocarpon HOM05D007433 ORTHO05D009199 2.3e-20 102.4 103 57.3
Ca_15891_v3 Cicer arietinum L. HOM05D007433 ORTHO05D009199 3.0e-20 102.1 112 61.6
MELO3C016834.2 Cucumis melo HOM05D007433 ORTHO05D009199 3.9e-20 101.7 109 58.7
Gohir.A05G211600 Gossypium hirsutum HOM05D007433 ORTHO05D009199 5.1e-20 101.3 97 59.8
PGSC0003DMG400004914 Solanum tuberosum HOM05D007433 ORTHO05D009199 5.1e-20 101.3 113 55.8
Gorai.009G221600 Gossypium raimondii HOM05D007433 ORTHO05D009199 6.6e-20 100.9 97 59.8
Rhsim07G0217700 Rhododendron simsii HOM05D007433 ORTHO05D009199 6.6e-20 100.9 113 61.1
Sabra02G0091500 Salix brachista HOM05D007433 ORTHO05D009199 6.6e-20 100.9 95 63.2
Atru.chr13.862 Acer truncatum HOM05D007433 ORTHO05D009199 1.1e-19 100.1 118 57.6
CANSAT25G0221 Cannabis sativa HOM05D007433 ORTHO05D009199 1.1e-19 100.1 111 55.9
Gohir.D05G214900 Gossypium hirsutum HOM05D007433 ORTHO05D009199 1.5e-19 99.8 97 58.8
Peaxi162Scf00340g00061 Petunia axillaris HOM05D007433 ORTHO05D009199 1.9e-19 99.4 110 58.2
Solyc04g077570.1 Solanum lycopersicum HOM05D007433 ORTHO05D009199 2.5e-19 99.0 110 54.5
TAR376G0199 Trochodendron aralioides HOM05D007433 ORTHO05D009199 3.3e-19 98.6 108 57.4
Sopen04g031210 Solanum pennellii HOM05D007433 ORTHO05D009199 4.3e-19 98.2 115 53.9
CAN.G1239.9 Capsicum annuum HOM05D007433 ORTHO05D009199 5.6e-19 97.8 107 54.2
CiPaw.08G051700 Carya illinoinensis HOM05D007433 ORTHO05D009199 5.6e-19 97.8 118 53.4
Dinv39208 Davidia involucrata HOM05D007433 ORTHO05D009199 5.6e-19 97.8 90 62.2
MD15G1066100 Malus domestica HOM05D007433 ORTHO05D009199 9.6e-19 97.1 105 58.1
Sc02g0008080 Simmondsia chinensis HOM05D007433 ORTHO05D009199 1.3e-18 96.7 106 54.7
FvH4_2g32740 Fragaria vesca HOM05D007433 ORTHO05D009199 2.1e-18 95.9 114 59.6
FAN24G3110 Fragaria x ananassa HOM05D007433 ORTHO05D009199 2.1e-18 95.9 114 59.6
Gohir.A06G025100 Gossypium hirsutum HOM05D007433 ORTHO05D009199 2.1e-18 95.9 111 53.2
Nitab4.5_0013161g0010 Nicotiana tabacum HOM05D007433 ORTHO05D009199 2.1e-18 95.9 98 58.2
Nn5g30654 Nelumbo nucifera HOM05D007433 ORTHO05D009199 3.6e-18 95.1 109 57.8
Actinidia19585 Actinidia chinensis HOM05D002375 ORTHO05D002457 6.2e-18 94.4 104 56.7
FAN15G2820 Fragaria x ananassa HOM05D007433 ORTHO05D009199 6.2e-18 94.4 109 57.8
Gohir.D06G022200 Gossypium hirsutum HOM05D007433 ORTHO05D009199 6.2e-18 94.4 113 50.4
Lsat_1_v5_gn_1_480 Lactuca sativa HOM05D007433 ORTHO05D009199 6.2e-18 94.4 113 54.0
Gorai.010G026800 Gossypium raimondii HOM05D007433 ORTHO05D009199 8.1e-18 94.0 114 50.9
RcHm_v2.0_Chr6g0309931 Rosa chinensis HOM05D007433 ORTHO05D009199 1.1e-17 93.6 108 57.4
TAR628G1336 Trochodendron aralioides HOM05D007433 ORTHO05D009199 1.1e-17 93.6 106 51.9
FAN27G2289 Fragaria x ananassa HOM05D007433 ORTHO05D009199 1.4e-17 93.2 109 56.9
Oeu014281.1 Olea europaea HOM05D007433 ORTHO05D009199 1.4e-17 93.2 94 59.6
FAN20G2053 Fragaria x ananassa HOM05D007433 ORTHO05D009199 1.8e-17 92.8 110 56.4
Eucgr.F00094 Eucalyptus grandis HOM05D007433 ORTHO05D009199 9.0e-17 90.5 90 57.8
Glyma.17G233300 Glycine max HOM05D007433 ORTHO05D009199 2.6e-16 89.0 107 57.9
Phvul.001G029300 Phaseolus vulgaris HOM05D007433 ORTHO05D009199 4.5e-16 88.2 105 54.3
ECA247G0789 Erigeron canadensis HOM05D007433 ORTHO05D009199 1.3e-15 86.7 107 48.6
Migut.C00395 Erythranthe guttata HOM05D007433 ORTHO05D009199 2.2e-15 85.9 79 59.5
VMungo0647G2383 Vigna mungo HOM05D007433 ORTHO05D009199 2.9e-15 85.5 107 55.1
AUR62035005 Chenopodium quinoa HOM05D007433 ORTHO05D009199 3.8e-15 85.1 106 51.9
Cc10_g07560 Coffea canephora HOM05D007433 ORTHO05D009199 3.8e-15 85.1 112 50.9
CsaV3_4G035230 Cucumis sativus L. HOM05D007433 ORTHO05D009199 3.8e-15 85.1 76 60.5
Nn6g34518 Nelumbo nucifera HOM05D007433 ORTHO05D009199 6.4e-15 84.3 124 48.4
HanXRQChr10g0295351 Helianthus annuus HOM05D007433 ORTHO05D009199 1.9e-14 82.8 104 52.9
Cpa.g.sc142.56 Carica papaya HOM05D007433 ORTHO05D009199 4.2e-14 81.6 111 52.3
Ciclev10002882m.g Citrus clementina HOM05D007433 ORTHO05D009199 4.2e-14 81.6 116 51.7
MBI16_g32085_MAGBIO Magnolia biondii HOM05D007433 ORTHO05D009199 5.4e-14 81.3 104 50.0
SalBow7G1382 Salvia bowleyana HOM05D007433 ORTHO05D009199 7.1e-14 80.9 98 51.0
EL10Ac1g02355 Beta vulgaris HOM05D007433 ORTHO05D009199 1.6e-13 79.7 114 45.6
TAR381G0154 Trochodendron aralioides HOM05D007433 ORTHO05D009199 2.1e-13 79.3 108 51.9
Phvul.011G135200 Phaseolus vulgaris HOM05D007433 ORTHO05D009199 5.1e-12 74.7 87 55.2
DCAR_008860 Daucus carota HOM05D007433 ORTHO05D009199 2.1e-10 69.3 73 53.4
Atru.chr13.863 Acer truncatum HOM05D007433 ORTHO05D009199 6.9e-09 64.3 83 51.8
Potri.014G007000 Populus trichocarpa HOM05D007433 ORTHO05D009199 3.4e-08 62.0 49 61.2
TAR375G0287 Trochodendron aralioides HOM05D003086 ORTHO05D003347 2.2e-07 59.3 48 54.2
Zm00001eb217410 Zea mays HOM05D007433 ORTHO05D009199 2.2e-07 59.3 93 46.2
Manes.13G109500 Manihot esculenta HOM05D007433 ORTHO05D009199 3.8e-07 58.5 87 43.7
Oeu010701.1 Olea europaea HOM05D003086 ORTHO05D003347 3.8e-07 58.5 59 50.8
Migut.B01892 Erythranthe guttata HOM05D003086 ORTHO05D003347 6.4e-07 57.8 47 57.4
Thecc.01G339800 Theobroma cacao HOM05D003086 ORTHO05D003347 6.4e-07 57.8 56 50.0
SalBow3G4039 Salvia bowleyana HOM05D007433 ORTHO05D009199 8.4e-07 57.4 49 57.1
Lsat_1_v5_gn_4_30961 Lactuca sativa HOM05D003086 ORTHO05D003347 1.1e-06 57.0 59 52.5
Cpa.g.sc1802.1 Carica papaya HOM05D003086 ORTHO05D003347 1.9e-06 56.2 49 55.1
Nn3g18930 Nelumbo nucifera HOM05D003086 ORTHO05D003347 2.4e-06 55.8 58 50.0
ClCG01G000300 Citrullus lanatus HOM05D003086 ORTHO05D003347 3.2e-06 55.5 47 53.2
Haze_15678 Corylus avellana HOM05D003086 ORTHO05D003347 4.2e-06 55.1 49 51.0
Dinv26956 Davidia involucrata HOM05D000754 ORTHO05D000169 4.2e-06 55.1 55 49.1
Gohir.A02G150000 Gossypium hirsutum HOM05D007433 ORTHO05D009199 4.2e-06 55.1 39 64.1
Atru.chr5.701 Acer truncatum HOM05D003086 ORTHO05D003347 5.5e-06 54.7 47 53.2
ATR0797G001 Amborella trichopoda HOM05D007433 ORTHO05D003347 5.5e-06 54.7 92 38.0
MELO3C005905.2 Cucumis melo HOM05D003086 ORTHO05D003347 5.5e-06 54.7 47 53.2
CsaV3_5G000270 Cucumis sativus L. HOM05D003086 ORTHO05D003347 5.5e-06 54.7 47 53.2
Gorai.003G032000 Gossypium raimondii HOM05D007433 ORTHO05D009199 5.5e-06 54.7 46 52.2
Atru.chr3.1055 Acer truncatum HOM05D007433 ORTHO05D009199 7.1e-06 54.3 52 53.8
AL6G44860 Arabidopsis lyrata HOM05D003086 ORTHO05D003347 7.1e-06 54.3 67 43.3
TAR636G1396 Trochodendron aralioides HOM05D003086 ORTHO05D003347 7.1e-06 54.3 47 53.2
COL.COLO4_06232 Corchorus olitorius HOM05D003086 ORTHO05D003347 9.3e-06 53.9 47 53.2
COL.COLO4_11609 Corchorus olitorius HOM05D007433 ORTHO05D009199 9.3e-06 53.9 36 63.9
PGR142G1468 Punica granatum HOM05D003086 ORTHO05D003347 9.3e-06 53.9 48 50.0
Rhsim09G0207000 Rhododendron simsii HOM05D003086 ORTHO05D003347 9.3e-06 53.9 70 42.9
Sabra02G0139700 Salix brachista HOM05D003086 ORTHO05D003347 9.3e-06 53.9 53 49.1
HPP92_025720 Vanilla planifolia HOM05D003086 ORTHO05D003347 9.3e-06 53.9 48 54.2


User provided reference genes

Program Settings