Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr08g0244391 Lupinus albus HOM05D003659 ORTHO05D004298 1.9e-111 406.0 221 100.0
Lalb_Chr23g0268261 Lupinus albus HOM05D003659 ORTHO05D004298 6.4e-104 380.9 221 83.3
Glyma.06G062900 Glycine max HOM05D003659 ORTHO05D004298 3.7e-99 365.2 221 81.0
Psat5g032160 Pisum sativum HOM05D003659 ORTHO05D004298 1.1e-98 363.6 220 88.2
arahy.Tifrunner.gnm1.ann1.48QDBJ Arachis hypogaea HOM05D003659 ORTHO05D004298 9.0e-98 360.5 223 88.8
arahy.Tifrunner.gnm1.ann1.85LDPV Arachis hypogaea HOM05D003659 ORTHO05D004298 2.0e-97 359.4 223 88.3
Glyma.04G061900 Glycine max HOM05D003659 ORTHO05D004298 4.5e-97 358.2 223 87.9
Medtr3g106130 Medicago truncatula HOM05D003659 ORTHO05D004298 2.9e-96 355.5 240 82.1
Lj1g0004529 Lotus japonicus HOM05D003659 ORTHO05D004298 1.9e-95 352.8 188 87.8
QL02p019557 Quercus lobata HOM05D003659 ORTHO05D004298 2.5e-95 352.4 220 79.5
Gorai.001G037100 Gossypium raimondii HOM05D003659 ORTHO05D004298 3.2e-95 352.1 221 86.0
ClCG05G016430 Citrullus lanatus HOM05D003659 ORTHO05D004298 4.2e-95 351.7 221 82.4
CsaV3_4G036690 Cucumis sativus L. HOM05D003659 ORTHO05D004298 7.1e-95 350.9 221 81.9
CSS0004565 Camellia sinensis var. sinensis HOM05D003659 ORTHO05D004298 1.2e-94 350.1 189 88.9
CSS0014874 Camellia sinensis var. sinensis HOM05D003659 ORTHO05D004298 1.2e-94 350.1 189 88.9
Cfa013072 Carpinus fangiana HOM05D003659 ORTHO05D004298 1.6e-94 349.7 221 77.8
Gohir.D07G035300 Gossypium hirsutum HOM05D003659 ORTHO05D004298 1.6e-94 349.7 221 85.5
Gohir.A07G031500 Gossypium hirsutum HOM05D003659 ORTHO05D004298 2.1e-94 349.4 221 85.5
TWI32G0040 Tripterygium wilfordii HOM05D003659 ORTHO05D004298 2.7e-94 349.0 221 77.4
MELO3C016972.2 Cucumis melo HOM05D003659 ORTHO05D004298 3.5e-94 348.6 221 86.4
PGR044G1948 Punica granatum HOM05D003659 ORTHO05D004298 4.6e-94 348.2 221 77.4
Gorai.009G061600 Gossypium raimondii HOM05D003659 ORTHO05D004298 7.9e-94 347.4 221 85.5
MD15G1038400 Malus domestica HOM05D003659 ORTHO05D004298 7.9e-94 347.4 221 77.8
Gohir.A05G058400 Gossypium hirsutum HOM05D003659 ORTHO05D004298 1.0e-93 347.1 221 85.5
Nn2g12325 Nelumbo nucifera HOM05D003659 ORTHO05D004298 1.0e-93 347.1 189 88.4
Gohir.D05G060500 Gossypium hirsutum HOM05D003659 ORTHO05D004298 1.3e-93 346.7 224 84.8
Thecc.09G017100 Theobroma cacao HOM05D003659 ORTHO05D004298 1.3e-93 346.7 221 83.7
GSVIVG01035892001 Vitis vinifera HOM05D003659 ORTHO05D004298 2.3e-93 345.9 221 76.9
CiPaw.08G006800 Carya illinoinensis HOM05D003659 ORTHO05D004298 3.0e-93 345.5 221 77.4
TWI34G1103 Tripterygium wilfordii HOM05D003659 ORTHO05D004298 3.9e-93 345.1 221 77.8
Ciclev10009450m.g Citrus clementina HOM05D003659 ORTHO05D004298 5.1e-93 344.7 221 79.2
PSO017G1057 Papaver somniferum HOM05D003659 ORTHO05D004298 1.1e-92 343.6 220 76.4
Duzib168G1659 Durio zibethinus HOM05D003659 ORTHO05D004298 1.5e-92 343.2 221 84.6
Nn8g39829 Nelumbo nucifera HOM05D003659 ORTHO05D004298 1.9e-92 342.8 222 78.4
PSO170G6877 Papaver somniferum HOM05D003659 ORTHO05D004298 1.9e-92 342.8 220 76.4
Phvul.009G088100 Phaseolus vulgaris HOM05D003659 ORTHO05D004298 1.9e-92 342.8 182 85.7
Actinidia25461 Actinidia chinensis HOM05D003659 ORTHO05D004298 2.5e-92 342.4 221 76.5
MSTRG.9405 Avicennia marina HOM05D003659 ORTHO05D004298 2.5e-92 342.4 220 76.4
Prupe.1G392400 Prunus persica HOM05D003659 ORTHO05D004298 2.5e-92 342.4 221 76.0
Duzib150G0849 Durio zibethinus HOM05D003659 ORTHO05D004298 3.3e-92 342.0 221 83.7
Actinidia18243 Actinidia chinensis HOM05D003659 ORTHO05D004298 5.7e-92 341.3 221 76.0
MD08G1057800 Malus domestica HOM05D003659 ORTHO05D004298 5.7e-92 341.3 183 85.8
Sed0006058 Sechium edule HOM05D003659 ORTHO05D004298 5.7e-92 341.3 189 84.7
RcHm_v2.0_Chr6g0299581 Rosa chinensis HOM05D003659 ORTHO05D004298 7.4e-92 340.9 221 75.1
TAR625G1087 Trochodendron aralioides HOM05D003659 ORTHO05D004298 7.4e-92 340.9 189 85.2
TAR625G1310 Trochodendron aralioides HOM05D003659 ORTHO05D004298 7.4e-92 340.9 221 83.7
Manes.16G128300 Manihot esculenta HOM05D003659 ORTHO05D004298 9.6e-92 340.5 219 74.4
Actinidia08946 Actinidia chinensis HOM05D003659 ORTHO05D004298 1.6e-91 339.7 189 84.7
Dinv23291 Davidia involucrata HOM05D003659 ORTHO05D004298 1.6e-91 339.7 221 75.6
Hund00440 Selenicereus undatus HOM05D003659 ORTHO05D004298 1.6e-91 339.7 220 75.5
BcaB06g28036 Brassica carinata HOM05D003659 ORTHO05D004298 2.1e-91 339.3 219 74.4
vmacro16858 Vaccinium macrocarpon HOM05D003659 ORTHO05D004298 2.1e-91 339.3 189 85.2
A09p55870 Brassica napus HOM05D003659 ORTHO05D004298 2.8e-91 339.0 219 83.1
BraA09t40990Z Brassica rapa HOM05D003659 ORTHO05D004298 2.8e-91 339.0 219 83.1
FAN20G3050 Fragaria x ananassa HOM05D003659 ORTHO05D004298 3.7e-91 338.6 184 85.3
Atru.chr7.2534 Acer truncatum HOM05D003659 ORTHO05D004298 4.8e-91 338.2 221 73.8
FvH4_2g40990 Fragaria vesca HOM05D003659 ORTHO05D004298 6.3e-91 337.8 221 75.1
Manes.03G010100 Manihot esculenta HOM05D003659 ORTHO05D004298 6.3e-91 337.8 221 73.3
Aqoxy7G01595 Aquilegia oxysepala HOM05D003659 ORTHO05D004298 8.2e-91 337.4 221 73.3
BcaC07g40890 Brassica carinata HOM05D003659 ORTHO05D004298 8.2e-91 337.4 219 82.6
C08p38860 Brassica napus HOM05D003659 ORTHO05D004298 8.2e-91 337.4 219 82.6
BolC8t51458H Brassica oleracea HOM05D003659 ORTHO05D004298 8.2e-91 337.4 219 74.4
Rhsim12G0187700 Rhododendron simsii HOM05D003659 ORTHO05D004298 8.2e-91 337.4 189 83.6
Potri.018G020700 Populus trichocarpa HOM05D003659 ORTHO05D004298 1.1e-90 337.0 184 84.2
Sed0005308 Sechium edule HOM05D003659 ORTHO05D004298 1.1e-90 337.0 184 84.8
Migut.D01114 Erythranthe guttata HOM05D003659 ORTHO05D004298 1.4e-90 336.7 221 75.1
FAN27G2887 Fragaria x ananassa HOM05D003659 ORTHO05D004298 1.4e-90 336.7 184 84.8
Cpa.g.sc127.19 Carica papaya HOM05D003659 ORTHO05D004298 2.4e-90 335.9 183 85.8
Lj5A80T55 Lonicera japonica HOM05D003659 ORTHO05D004298 3.1e-90 335.5 184 83.7
CSS0027457 Camellia sinensis var. sinensis HOM05D003659 ORTHO05D004298 4.1e-90 335.1 189 82.5
CSS0033149 Camellia sinensis var. sinensis HOM05D003659 ORTHO05D004298 4.1e-90 335.1 189 82.5
Eucgr.C02663 Eucalyptus grandis HOM05D003659 ORTHO05D004298 4.1e-90 335.1 221 73.3
Thhalv10000317m.g Eutrema salsugineum HOM05D003659 ORTHO05D004298 4.1e-90 335.1 219 73.5
Oeu027829.1 Olea europaea HOM05D003659 ORTHO05D004298 4.1e-90 335.1 221 74.7
Sabra06G0205400 Salix brachista HOM05D003659 ORTHO05D004298 5.3e-90 334.7 183 84.7
Aa31LG7G12130 Aethionema arabicum HOM05D003659 ORTHO05D004298 6.9e-90 334.3 219 74.4
Cc04_g05030 Coffea canephora HOM05D003659 ORTHO05D004298 6.9e-90 334.3 220 74.1
Lj9A494G39 Lonicera japonica HOM05D003659 ORTHO05D004298 6.9e-90 334.3 187 82.9
Oeu060128.1 Olea europaea HOM05D003659 ORTHO05D004298 9.0e-90 334.0 221 73.8
Potri.006G263200 Populus trichocarpa HOM05D003659 ORTHO05D004298 9.0e-90 334.0 183 83.6
THA.LOC104803632 Tarenaya hassleriana HOM05D003659 ORTHO05D004298 1.2e-89 333.6 188 83.0
MSTRG.22794 Avicennia marina HOM05D003659 ORTHO05D004298 2.6e-89 332.4 189 82.5
A04p19520 Brassica napus HOM05D003659 ORTHO05D004298 2.6e-89 332.4 219 74.4
BraA04t17546Z Brassica rapa HOM05D003659 ORTHO05D004298 2.6e-89 332.4 219 74.4
C04p55110 Brassica napus HOM05D003659 ORTHO05D004298 3.4e-89 332.0 219 74.4
BolC4t27050H Brassica oleracea HOM05D003659 ORTHO05D004298 3.4e-89 332.0 219 74.4
Migut.I00701 Erythranthe guttata HOM05D003659 ORTHO05D004298 3.4e-89 332.0 220 73.6
AT2G25110 Arabidopsis thaliana HOM05D003659 ORTHO05D004298 5.9e-89 331.3 219 73.1
ECA247G2368 Erigeron canadensis HOM05D003659 ORTHO05D004298 5.9e-89 331.3 221 72.4
AL4G16270 Arabidopsis lyrata HOM05D003659 ORTHO05D004298 7.6e-89 330.9 219 73.1
BcaC02g08370 Brassica carinata HOM05D003659 ORTHO05D004298 7.6e-89 330.9 219 74.0
CAN.G407.57 Capsicum annuum HOM05D003659 ORTHO05D004298 1.0e-88 330.5 221 73.8
vmacro19047 Vaccinium macrocarpon HOM05D003659 ORTHO05D004298 1.0e-88 330.5 221 74.2
MSTRG.11175 Avicennia marina HOM05D003659 ORTHO05D004298 1.3e-88 330.1 221 73.8
Carub.0004s0471 Capsella rubella HOM05D003659 ORTHO05D004298 2.2e-88 329.3 219 72.6
Peaxi162Scf00332g00435 Petunia axillaris HOM05D003659 ORTHO05D004298 2.2e-88 329.3 221 73.3
COL.COLO4_03628 Corchorus olitorius HOM05D003659 ORTHO05D004298 2.9e-88 328.9 174 87.9
ECA246G1998 Erigeron canadensis HOM05D003659 ORTHO05D004298 2.9e-88 328.9 188 80.3
HanXRQChr04g0098481 Helianthus annuus HOM05D003659 ORTHO05D004298 3.8e-88 328.6 221 72.9
Sp4g04120 Schrenkiella parvula HOM05D003659 ORTHO05D004298 3.8e-88 328.6 219 73.1
CARHR116580 Cardamine hirsuta HOM05D003659 ORTHO05D004298 5.0e-88 328.2 219 71.7
PGSC0003DMG400014120 Solanum tuberosum HOM05D003659 ORTHO05D004298 6.5e-88 327.8 221 73.3
ATR0739G101 Amborella trichopoda HOM05D003659 ORTHO05D004298 8.4e-88 327.4 217 73.3
Lsat_1_v5_gn_1_32141 Lactuca sativa HOM05D003659 ORTHO05D004298 8.4e-88 327.4 221 72.4
GSVIVG01034217001 Vitis vinifera HOM05D003659 ORTHO05D004298 8.4e-88 327.4 219 73.1
Haze_21430 Corylus avellana HOM05D003659 ORTHO05D004298 1.4e-87 326.6 271 67.5
SHI18485 Sapria himalayana HOM05D003659 ORTHO05D004298 1.9e-87 326.2 190 80.5
Hund06525 Selenicereus undatus HOM05D003659 ORTHO05D004298 1.9e-87 326.2 220 72.7
Rhsim08G0207200 Rhododendron simsii HOM05D003659 ORTHO05D004298 3.2e-87 325.5 221 73.3
EL10Ac9g22216 Beta vulgaris HOM05D003659 ORTHO05D004298 4.2e-87 325.1 220 70.9
Lsat_1_v5_gn_5_8201 Lactuca sativa HOM05D003659 ORTHO05D004298 5.5e-87 324.7 220 71.4
Os08g0440500 Oryza sativa ssp. japonica HOM05D003659 ORTHO05D004298 5.5e-87 324.7 189 79.9
SGA_v2.0_scaffold5G02776 Striga asiatica HOM05D003659 ORTHO05D004298 5.5e-87 324.7 221 73.3
AUR62030831 Chenopodium quinoa HOM05D003659 ORTHO05D004298 7.2e-87 324.3 220 70.9
HPP92_004679 Vanilla planifolia HOM05D003659 ORTHO05D004298 9.3e-87 323.9 221 72.9
Os08g0278900 Oryza sativa ssp. japonica HOM05D003659 ORTHO05D004298 1.2e-86 323.6 184 79.3
DCAR_021366 Daucus carota HOM05D003659 ORTHO05D004298 2.7e-86 322.4 189 80.4
AUR62026991 Chenopodium quinoa HOM05D003659 ORTHO05D004298 3.6e-86 322.0 220 70.9
Solyc03g117020.4 Solanum lycopersicum HOM05D003659 ORTHO05D004298 4.6e-86 321.6 218 72.5
Sopen03g035920 Solanum pennellii HOM05D003659 ORTHO05D004298 4.6e-86 321.6 218 72.5
Nitab4.5_0001454g0190 Nicotiana tabacum HOM05D003659 ORTHO05D004298 2.3e-85 319.3 230 70.4
CDE05G0949 Ceratophyllum demersum HOM05D003659 ORTHO05D004298 3.9e-85 318.5 185 80.5
Zm00001eb179820 Zea mays HOM05D003659 ORTHO05D004298 3.3e-84 315.5 188 78.2
HanXRQChr08g0235851 Helianthus annuus HOM05D003659 ORTHO05D004298 4.3e-84 315.1 188 76.1
Zm00001eb041170 Zea mays HOM05D003659 ORTHO05D004298 4.3e-84 315.1 183 78.1
Oeu004335.5 Olea europaea HOM05D003659 ORTHO05D004298 2.2e-83 312.8 208 73.6
unitig_61.g26227 Utricularia gibba HOM05D003659 ORTHO05D004298 2.2e-83 312.8 189 76.7
DCAR_025575 Daucus carota HOM05D003659 ORTHO05D004298 3.7e-83 312.0 189 78.3
HanXRQChr05g0153781 Helianthus annuus HOM05D003659 ORTHO05D004298 4.8e-83 311.6 188 77.1
SalBow7G4756 Salvia bowleyana HOM05D003659 ORTHO05D004298 1.4e-82 310.1 173 80.3
Ah.01g006880 Amaranthus hybridus HOM05D003659 ORTHO05D004298 4.1e-82 308.5 256 62.1
SEGI_01700 Sequoiadendron giganteum HOM05D003659 ORTHO05D004298 5.3e-82 308.1 174 79.9
unitig_0.g1106 Utricularia gibba HOM05D003659 ORTHO05D004298 9.0e-82 307.4 223 68.6
arahy.Tifrunner.gnm1.ann1.7GH63I Arachis hypogaea HOM05D003659 ORTHO05D004298 1.2e-81 307.0 185 77.3
CDE02G2060 Ceratophyllum demersum HOM05D003659 ORTHO05D004298 1.5e-81 306.6 171 82.5
arahy.Tifrunner.gnm1.ann1.Q7FMUW Arachis hypogaea HOM05D003659 ORTHO05D004298 5.9e-81 304.7 185 76.8
Sc12g0008380 Simmondsia chinensis HOM05D003659 ORTHO05D004298 1.1e-76 290.4 194 74.7
Mapoly0146s0027 Marchantia polymorpha HOM05D003659 ORTHO05D004298 2.4e-74 282.7 177 70.1
Pp3c12_21450 Physcomitrium patens HOM05D003659 ORTHO05D004298 4.1e-74 282.0 176 71.6
Ah.16g104980 Amaranthus hybridus HOM05D003659 ORTHO05D004298 9.1e-74 280.8 183 69.9
Pp3c4_7140 Physcomitrium patens HOM05D003659 ORTHO05D004298 1.5e-73 280.0 175 70.9
Lsat_1_v5_gn_4_87041 Lactuca sativa HOM05D003659 ORTHO05D004298 3.8e-72 275.4 189 69.3
SMO340G0294 Selaginella moellendorffii HOM05D003659 ORTHO05D004298 3.2e-71 272.3 181 69.1
SMO304G0007 Selaginella moellendorffii HOM05D003659 ORTHO05D004298 9.4e-71 270.8 177 70.6
TPR.G3109 Trifolium pratense HOM05D003659 ORTHO05D004298 1.6e-70 270.0 220 73.6
CBR_g38858 Chara braunii HOM05D003659 ORTHO05D004298 7.0e-66 254.6 177 63.8
HPP92_010392 Vanilla planifolia HOM05D003659 ORTHO05D004298 5.2e-61 238.4 147 72.1
Pp3c9_3320 Physcomitrium patens HOM05D003659 ORTHO05D004298 9.7e-60 234.2 176 60.8
TAR636G3496 Trochodendron aralioides HOM05D003659 ORTHO05D004298 5.3e-58 228.4 225 58.7
Dinv21405 Davidia involucrata HOM05D003659 ORTHO05D004298 1.3e-56 223.8 124 80.6
AUR62012468 Chenopodium quinoa HOM05D003659 ORTHO05D004298 1.3e-51 207.2 196 53.6
MCO11G512 Micromonas commoda HOM05D003659 ORTHO05D004298 1.2e-49 200.7 184 52.7
Cre13.g571750 Chlamydomonas reinhardtii HOM05D003659 ORTHO05D004298 7.7e-49 198.0 182 51.1
THA.LOC104804845 Tarenaya hassleriana HOM05D003659 ORTHO05D004298 2.2e-48 196.4 105 81.9
AUR62031594 Chenopodium quinoa HOM05D003659 ORTHO05D004298 4.0e-45 185.7 181 51.4
arahy.Tifrunner.gnm1.ann1.K0Y0BK Arachis hypogaea HOM05D003659 ORTHO05D004298 7.7e-41 171.4 108 75.0
Nitab4.5_0026787g0010 Nicotiana tabacum HOM05D003659 ORTHO05D004298 2.3e-40 169.9 134 66.4
TPR.G40670 Trifolium pratense HOM05D003659 ORTHO05D004298 2.9e-40 169.5 87 85.1
PRCOL_00006403 Prasinoderma coloniale HOM05D003659 ORTHO05D004298 6.8e-37 158.3 176 43.2
Cc07_g20440 Coffea canephora HOM05D003659 ORTHO05D004298 7.5e-36 154.8 123 65.0
Dinv40986 Davidia involucrata HOM05D003659 ORTHO05D004298 1.3e-35 154.1 105 77.1
Cc00_g05940 Coffea canephora HOM05D003659 ORTHO05D004298 4.9e-35 152.1 123 60.2
Cc10_g09910 Coffea canephora HOM05D003659 ORTHO05D004298 1.1e-34 151.0 123 63.4
Cc05_g03490 Coffea canephora HOM05D003659 ORTHO05D004298 2.4e-34 149.8 91 78.0
Cc08_g06110 Coffea canephora HOM05D003659 ORTHO05D004298 4.1e-34 149.1 123 63.4
Cc10_g10650 Coffea canephora HOM05D003659 ORTHO05D004298 7.0e-34 148.3 123 60.2
Cc05_g01640 Coffea canephora HOM05D003659 ORTHO05D004298 5.6e-31 138.7 124 60.5
Actinidia36884 Actinidia chinensis HOM05D003659 ORTHO05D004298 1.2e-30 137.5 80 82.5
Cc08_g07620 Coffea canephora HOM05D003659 ORTHO05D004298 3.6e-30 136.0 75 81.3
EL10Ac2g04128 Beta vulgaris HOM05D003659 ORTHO05D004298 1.4e-29 134.0 148 48.0
Ca_15770_v3 Cicer arietinum L. HOM05D003659 ORTHO05D004298 2.3e-29 133.3 67 89.6
Cc00_g06440 Coffea canephora HOM05D003659 ORTHO05D004298 1.1e-26 124.4 73 75.3
BraA10t44716Z Brassica rapa HOM05D001880 ORTHO05D004730 7.0e-26 121.7 62 83.9
Cc00_g21920 Coffea canephora HOM05D003659 ORTHO05D004298 1.2e-25 120.9 75 76.0
HPP92_010427 Vanilla planifolia HOM05D003659 ORTHO05D004298 3.0e-24 116.3 92 63.0
Haze_27667 Corylus avellana HOM05D003659 ORTHO05D004298 2.4e-18 96.7 120 40.0
Hma1.2p1_0302F.1_g118750 Hydrangea macrophylla HOM05D003659 ORTHO05D004298 7.1e-18 95.1 61 73.8
AagrBONN_evm.TU.Sc2ySwM_117.1898 Anthoceros agrestis HOM05D003659 ORTHO05D004298 3.0e-16 89.7 49 73.5
FvH4_3g15950 Fragaria vesca HOM05D003659 ORTHO05D004298 7.3e-15 85.1 86 54.7
Cfa026278 Carpinus fangiana HOM05D003659 ORTHO05D121859 1.2e-12 77.8 153 32.7
Cfa024316 Carpinus fangiana HOM05D003659 ORTHO05D124421 1.4e-10 70.9 198 29.8
FAN11G3099 Fragaria x ananassa HOM05D003659 ORTHO05D004298 1.9e-10 70.5 77 53.2
A10p26590 Brassica napus HOM05D001880 ORTHO05D004730 1.7e-08 63.9 44 63.6
SHI48633 Sapria himalayana HOM05D003659 ORTHO05D004298 6.6e-08 62.0 48 62.5
Cfa024390 Carpinus fangiana HOM05D003659 ORTHO05D125208 2.5e-07 60.1 195 30.3
SHI37098 Sapria himalayana HOM05D003659 ORTHO05D004298 7.3e-07 58.5 44 65.9
SHI20750 Sapria himalayana HOM05D003659 ORTHO05D004298 2.8e-06 56.6 61 49.2


User provided reference genes

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