Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr08g0244231 Lupinus albus HOM05D005054 ORTHO05D005948 2.5e-136 488.8 256 100.0
Lalb_Chr23g0268431 Lupinus albus HOM05D005054 ORTHO05D005948 1.0e-97 360.5 209 89.0
Phvul.009G091300 Phaseolus vulgaris HOM05D005054 ORTHO05D005948 2.3e-92 342.8 210 84.8
Glyma.04G065200 Glycine max HOM05D005054 ORTHO05D005948 2.9e-92 342.4 210 84.8
Ca_15755_v3 Cicer arietinum L. HOM05D005054 ORTHO05D005948 6.6e-92 341.3 206 86.4
Medtr3g106570 Medicago truncatula HOM05D005054 ORTHO05D005948 1.1e-91 340.5 207 87.4
Glyma.06G066400 Glycine max HOM05D005054 ORTHO05D005948 1.9e-91 339.7 210 84.3
TPR.G3145 Trifolium pratense HOM05D005054 ORTHO05D005948 4.2e-91 338.6 204 86.8
VMungo1309G0253 Vigna mungo HOM05D005054 ORTHO05D005948 1.2e-90 337.0 210 82.9
Lj1g0015588 Lotus japonicus HOM05D005054 ORTHO05D005948 8.0e-90 334.3 210 82.4
arahy.Tifrunner.gnm1.ann1.NJ6IKW Arachis hypogaea HOM05D005054 ORTHO05D005948 2.0e-88 329.7 203 84.2
Psat5g031480 Pisum sativum HOM05D005054 ORTHO05D005948 3.5e-85 318.9 201 82.1
Thecc.09G021500 Theobroma cacao HOM05D005054 ORTHO05D005948 4.3e-83 312.0 205 77.6
ClCG05G016710 Citrullus lanatus HOM05D005054 ORTHO05D005948 2.1e-82 309.7 196 82.1
CANSAT78G0154 Cannabis sativa HOM05D005054 ORTHO05D005948 2.8e-82 309.3 203 76.4
TWI32G1290 Tripterygium wilfordii HOM05D005054 ORTHO05D005948 4.7e-82 308.5 204 76.5
CsaV3_3G046210 Cucumis sativus L. HOM05D005054 ORTHO05D005948 6.1e-82 308.1 196 81.6
Dinv18198 Davidia involucrata HOM05D005054 ORTHO05D005948 1.0e-81 307.4 206 78.6
GSVIVG01035953001 Vitis vinifera HOM05D005054 ORTHO05D005948 1.0e-81 307.4 200 79.0
MELO3C003718.2 Cucumis melo HOM05D005054 ORTHO05D005948 1.4e-81 307.0 196 81.1
Sed0004415 Sechium edule HOM05D005054 ORTHO05D005948 4.0e-81 305.4 246 67.9
Gohir.A07G029500 Gossypium hirsutum HOM05D005054 ORTHO05D005948 1.2e-80 303.9 196 79.6
Sed0027504 Sechium edule HOM05D005054 ORTHO05D005948 1.2e-80 303.9 196 78.6
Actinidia14591 Actinidia chinensis HOM05D005054 ORTHO05D005948 2.6e-80 302.8 203 76.8
Gorai.001G035100 Gossypium raimondii HOM05D005054 ORTHO05D005948 4.4e-80 302.0 196 79.1
CiPaw.08G009700 Carya illinoinensis HOM05D005054 ORTHO05D005948 9.8e-80 300.8 199 78.4
Gohir.D07G033500 Gossypium hirsutum HOM05D005054 ORTHO05D005948 1.7e-79 300.1 196 78.6
Prupe.1G483600 Prunus persica HOM05D005054 ORTHO05D005948 1.7e-79 300.1 202 76.2
Duzib187G0432 Durio zibethinus HOM05D005054 ORTHO05D005948 2.9e-79 299.3 198 77.3
MD15G1128300 Malus domestica HOM05D005054 ORTHO05D005948 2.9e-79 299.3 201 76.1
MD08G1157200 Malus domestica HOM05D005054 ORTHO05D005948 8.3e-79 297.7 201 75.6
Nn2g12158 Nelumbo nucifera HOM05D005054 ORTHO05D005948 8.3e-79 297.7 202 74.8
Sc06g0000550 Simmondsia chinensis HOM05D005054 ORTHO05D005948 8.3e-79 297.7 200 75.5
Cc08_g00410 Coffea canephora HOM05D005054 ORTHO05D005948 1.4e-78 297.0 202 77.2
COL.COLO4_18886 Corchorus olitorius HOM05D002641 ORTHO05D001537 1.4e-78 297.0 176 82.4
Aqoxy7G03608 Aquilegia oxysepala HOM05D005054 ORTHO05D005948 2.4e-78 296.2 213 71.4
Potri.006G257100 Populus trichocarpa HOM05D005054 ORTHO05D005948 2.4e-78 296.2 205 76.1
CiPaw.07G225400 Carya illinoinensis HOM05D005054 ORTHO05D005948 5.4e-78 295.0 199 75.9
Haze_21489 Corylus avellana HOM05D005054 ORTHO05D005948 9.2e-78 294.3 200 76.5
Potri.018G024600 Populus trichocarpa HOM05D005054 ORTHO05D005948 2.0e-77 293.1 204 77.0
PGR083G2649 Punica granatum HOM05D005054 ORTHO05D005948 2.0e-77 293.1 205 77.1
Manes.16G124300 Manihot esculenta HOM05D005054 ORTHO05D005948 2.7e-77 292.7 201 74.6
TAR625G0984 Trochodendron aralioides HOM05D005054 ORTHO05D005948 2.7e-77 292.7 223 70.0
CSS0023128 Camellia sinensis var. sinensis HOM05D005054 ORTHO05D005948 4.6e-77 292.0 198 76.8
CSS0037696 Camellia sinensis var. sinensis HOM05D005054 ORTHO05D005948 4.6e-77 292.0 198 76.8
Gohir.D06G101400 Gossypium hirsutum HOM05D005054 ORTHO05D005948 1.7e-76 290.0 191 75.4
Eucgr.C02743 Eucalyptus grandis HOM05D005054 ORTHO05D005948 2.3e-76 289.7 182 79.7
Gorai.010G116300 Gossypium raimondii HOM05D005054 ORTHO05D005948 5.0e-76 288.5 187 75.9
TAR626G0177 Trochodendron aralioides HOM05D005054 ORTHO05D005948 5.0e-76 288.5 200 74.5
Sopen08g012360 Solanum pennellii HOM05D005054 ORTHO05D005948 8.6e-76 287.7 204 72.5
Solyc08g041980.3 Solanum lycopersicum HOM05D005054 ORTHO05D005948 1.1e-75 287.3 203 72.9
Gohir.A06G099200 Gossypium hirsutum HOM05D005054 ORTHO05D005948 1.5e-75 287.0 191 74.9
HanXRQChr02g0050341 Helianthus annuus HOM05D005054 ORTHO05D005948 1.5e-75 287.0 200 73.0
HanXRQChr13g0403241 Helianthus annuus HOM05D005054 ORTHO05D005948 1.9e-75 286.6 186 77.4
Ciclev10009464m.g Citrus clementina HOM05D005054 ORTHO05D005948 4.3e-75 285.4 211 71.6
CAN.G9.14 Capsicum annuum HOM05D005054 ORTHO05D005948 9.5e-75 284.3 209 70.8
Cpa.g.sc187.3 Carica papaya HOM05D005054 ORTHO05D005948 9.5e-75 284.3 201 75.1
Manes.03G012900 Manihot esculenta HOM05D005054 ORTHO05D005948 2.8e-74 282.7 201 74.6
QL02p021123 Quercus lobata HOM05D005054 ORTHO05D005948 6.2e-74 281.6 205 73.7
CSS0023723 Camellia sinensis var. sinensis HOM05D005054 ORTHO05D005948 1.4e-73 280.4 203 74.9
CSS0024153 Camellia sinensis var. sinensis HOM05D005054 ORTHO05D005948 1.4e-73 280.4 203 74.9
THA.LOC104803846 Tarenaya hassleriana HOM05D005054 ORTHO05D005948 1.4e-73 280.4 199 75.9
Actinidia22328 Actinidia chinensis HOM05D005054 ORTHO05D005948 1.8e-73 280.0 192 74.5
ECA233G2586 Erigeron canadensis HOM05D005054 ORTHO05D005948 1.8e-73 280.0 199 72.9
ATR0767G140 Amborella trichopoda HOM05D005054 ORTHO05D005948 3.1e-73 279.3 198 72.7
FAN20G0036 Fragaria x ananassa HOM05D005054 ORTHO05D005948 3.1e-73 279.3 199 74.4
RcHm_v2.0_Chr6g0297531 Rosa chinensis HOM05D005054 ORTHO05D005948 3.1e-73 279.3 209 71.3
FAN27G2872 Fragaria x ananassa HOM05D005054 ORTHO05D005948 5.2e-73 278.5 206 72.8
FAN24G3113 Fragaria x ananassa HOM05D005054 ORTHO05D005948 6.8e-73 278.1 199 73.4
FvH4_2g28770 Fragaria vesca HOM05D005054 ORTHO05D005948 8.9e-73 277.7 203 72.9
Lj8A723T59 Lonicera japonica HOM05D005054 ORTHO05D005948 8.9e-73 277.7 157 87.3
Nitab4.5_0003389g0010 Nicotiana tabacum HOM05D005054 ORTHO05D005948 1.5e-72 276.9 238 65.5
Lsat_1_v5_gn_6_20280 Lactuca sativa HOM05D005054 ORTHO05D005948 2.0e-72 276.6 198 70.7
FAN15G2263 Fragaria x ananassa HOM05D002641 ORTHO05D005948 2.6e-72 276.2 199 73.4
AL4G16690 Arabidopsis lyrata HOM05D005054 ORTHO05D005948 3.4e-72 275.8 214 68.7
AT2G25310 Arabidopsis thaliana HOM05D005054 ORTHO05D005948 9.8e-72 274.2 200 72.0
EL10Ac2g04185 Beta vulgaris HOM05D005054 ORTHO05D005948 1.3e-71 273.9 207 68.6
Actinidia33783 Actinidia chinensis HOM05D005054 ORTHO05D005948 2.9e-71 272.7 161 82.0
A09p55700 Brassica napus HOM05D005054 ORTHO05D005948 2.9e-71 272.7 200 72.0
BraA09t40971Z Brassica rapa HOM05D005054 ORTHO05D005948 2.9e-71 272.7 200 72.0
THA.LOC104803647 Tarenaya hassleriana HOM05D005054 ORTHO05D005948 3.7e-71 272.3 208 70.2
HPP92_000468 Vanilla planifolia HOM05D005054 ORTHO05D005948 3.7e-71 272.3 194 70.1
Carub.0004s0494 Capsella rubella HOM05D005054 ORTHO05D005948 6.4e-71 271.6 200 70.5
AT4G32130 Arabidopsis thaliana HOM05D005054 ORTHO05D005948 8.3e-71 271.2 201 69.7
BcaC07g40871 Brassica carinata HOM05D005054 ORTHO05D005948 1.4e-70 270.4 200 71.5
Sabra18G0027000 Salix brachista HOM05D002641 ORTHO05D001537 1.4e-70 270.4 218 69.7
Sp4g04450 Schrenkiella parvula HOM05D005054 ORTHO05D005948 1.4e-70 270.4 198 71.2
Hund25870 Selenicereus undatus HOM05D005054 ORTHO05D005948 1.9e-70 270.0 218 66.5
BcaB08g35175 Brassica carinata HOM05D005054 ORTHO05D005948 2.4e-70 269.6 204 71.1
vmacro11190 Vaccinium macrocarpon HOM05D005054 ORTHO05D005948 1.2e-69 267.3 286 53.8
CARHR116210 Cardamine hirsuta HOM05D005054 ORTHO05D005948 3.5e-69 265.8 202 69.3
Thhalv10026275m.g Eutrema salsugineum HOM05D005054 ORTHO05D005948 3.5e-69 265.8 203 68.0
PSO017G3131 Papaver somniferum HOM05D005054 ORTHO05D005948 3.5e-69 265.8 191 70.7
BolC1t00678H Brassica oleracea HOM05D005054 ORTHO05D005948 4.6e-69 265.4 202 67.3
PSO170G1976 Papaver somniferum HOM05D005054 ORTHO05D005948 4.6e-69 265.4 202 68.8
Carub.0007s0843 Capsella rubella HOM05D005054 ORTHO05D005948 6.0e-69 265.0 205 67.8
Sp7g29920 Schrenkiella parvula HOM05D005054 ORTHO05D005948 1.0e-68 264.2 195 68.2
BolC8t51440H Brassica oleracea HOM05D005054 ORTHO05D005948 1.3e-68 263.8 206 69.4
MSTRG.26017 Avicennia marina HOM05D005054 ORTHO05D005948 2.3e-68 263.1 200 70.0
C08p38700 Brassica napus HOM05D005054 ORTHO05D005948 3.0e-68 262.7 206 68.9
Thhalv10000323m.g Eutrema salsugineum HOM05D005054 ORTHO05D005948 3.0e-68 262.7 206 67.5
BcaC09g52000 Brassica carinata HOM05D005054 ORTHO05D005948 3.9e-68 262.3 195 67.2
Migut.A00022 Erythranthe guttata HOM05D005054 ORTHO05D005948 1.1e-67 260.8 204 67.6
unitig_0.g694 Utricularia gibba HOM05D005054 ORTHO05D005948 2.5e-67 259.6 200 68.0
CARHR240040 Cardamine hirsuta HOM05D005054 ORTHO05D005948 4.3e-67 258.8 172 74.4
AL7G19730 Arabidopsis lyrata HOM05D005054 ORTHO05D005948 5.6e-67 258.5 207 67.6
BcaNung03140 Brassica carinata HOM05D005054 ORTHO05D005948 5.6e-67 258.5 195 66.2
AUR62031549 Chenopodium quinoa HOM05D005054 ORTHO05D005948 1.6e-66 256.9 159 81.8
Sopen06g024410 Solanum pennellii HOM05D005054 ORTHO05D005948 2.8e-66 256.1 193 71.0
Rhsim02G0203400 Rhododendron simsii HOM05D005054 ORTHO05D005948 3.6e-66 255.8 230 58.3
BraA01t00585Z Brassica rapa HOM05D005054 ORTHO05D005948 8.1e-66 254.6 172 72.1
Zm00001eb275230 Zea mays HOM05D005054 ORTHO05D005948 1.8e-65 253.4 196 67.3
CDE12G0076 Ceratophyllum demersum HOM05D005054 ORTHO05D005948 2.3e-65 253.1 197 68.0
Solyc06g065930.4 Solanum lycopersicum HOM05D005054 ORTHO05D005948 6.8e-65 251.5 220 63.6
CAN.G1475.8 Capsicum annuum HOM05D005054 ORTHO05D005948 8.9e-65 251.1 193 68.9
Os06g0644100 Oryza sativa ssp. japonica HOM05D005054 ORTHO05D005948 2.0e-64 250.0 202 64.4
AUR62012426 Chenopodium quinoa HOM05D005054 ORTHO05D005948 1.1e-62 244.2 207 64.7
arahy.Tifrunner.gnm1.ann1.49IL45 Arachis hypogaea HOM05D005054 ORTHO05D005948 1.4e-62 243.8 205 67.3
Nitab4.5_0000109g0420 Nicotiana tabacum HOM05D005054 ORTHO05D005948 2.4e-62 243.0 165 74.5
SalBow4G2693 Salvia bowleyana HOM05D005054 ORTHO05D005948 2.4e-62 243.0 197 66.0
Zm00001eb387020 Zea mays HOM05D005054 ORTHO05D005948 3.3e-59 232.6 169 69.2
CDE01G0036 Ceratophyllum demersum HOM05D005054 ORTHO05D005948 5.6e-59 231.9 197 65.0
Atru.chr7.2466 Acer truncatum HOM05D002641 ORTHO05D001537 4.4e-56 222.2 161 72.0
PGSC0003DMG400029900 Solanum tuberosum HOM05D005054 ORTHO05D005948 2.1e-53 213.4 128 80.5
Mapoly0003s0100 Marchantia polymorpha HOM05D005054 ORTHO05D005948 2.3e-52 209.9 192 55.7
MBI14_g36925_MAGBIO Magnolia biondii HOM05D005054 ORTHO05D005948 3.9e-52 209.1 121 83.5
Nitab4.5_0005785g0040 Nicotiana tabacum HOM05D005054 ORTHO05D005948 2.8e-50 203.0 127 78.0
Nitab4.5_0000857g0140 Nicotiana tabacum HOM05D005054 ORTHO05D005948 5.8e-48 195.3 157 67.5
AagrBONN_evm.TU.Sc2ySwM_362.161 Anthoceros agrestis HOM05D005054 ORTHO05D005948 2.9e-47 193.0 170 57.6
Pp3c25_10780 Physcomitrium patens HOM05D005054 ORTHO05D005948 3.8e-47 192.6 193 54.9
SGA_v2.0_scaffold64G21960 Striga asiatica HOM05D005054 ORTHO05D005948 1.9e-46 190.3 123 79.7
SMO354G0008 Selaginella moellendorffii HOM05D005054 ORTHO05D005948 3.5e-45 186.0 150 60.7
arahy.Tifrunner.gnm1.ann1.M1LVA5 Arachis hypogaea HOM05D005054 ORTHO05D005948 4.6e-45 185.7 96 90.6
Zm00001eb149990 Zea mays HOM05D005054 ORTHO05D005948 8.7e-44 181.4 122 73.8
Oeu024982.1 Olea europaea HOM05D005054 ORTHO05D005948 7.3e-43 178.3 110 82.7
DCAR_001545 Daucus carota HOM05D005054 ORTHO05D005948 3.6e-42 176.0 103 82.5
Actinidia14094 Actinidia chinensis HOM05D005054 ORTHO05D005948 1.4e-41 174.1 203 53.2
Peaxi162Scf00136g00153 Petunia axillaris HOM05D005054 ORTHO05D005948 5.8e-40 168.7 107 77.6
HPP92_000478 Vanilla planifolia HOM05D005054 ORTHO05D005948 9.3e-38 161.4 168 53.6
SMO364G0469 Selaginella moellendorffii HOM05D005054 ORTHO05D005948 2.3e-36 156.8 149 52.3
CBR_g24053 Chara braunii HOM05D005054 ORTHO05D005948 7.4e-35 151.8 172 46.5
CDE01G0528 Ceratophyllum demersum HOM05D005054 ORTHO05D005948 9.0e-33 144.8 175 50.3
Zm00001eb279560 Zea mays HOM05D005054 ORTHO05D005948 2.5e-30 136.7 100 71.0
FvH4_6g38550 Fragaria vesca HOM05D005054 ORTHO05D005948 3.3e-19 99.8 108 53.7
A01p06180 Brassica napus HOM05D000316 ORTHO05D001978 1.6e-18 97.4 70 65.7
C01p06810 Brassica napus HOM05D000316 ORTHO05D001978 6.3e-18 95.5 70 64.3
Zm00001eb412760 Zea mays HOM05D002563 ORTHO05D005948 2.4e-17 93.6 59 71.2
MCO11G876 Micromonas commoda HOM05D005054 ORTHO05D005948 1.5e-16 90.9 159 35.8
Nitab4.5_0006784g0020 Nicotiana tabacum HOM05D005054 ORTHO05D005948 1.5e-16 90.9 215 36.3
Zm00001eb260640 Zea mays HOM05D002563 ORTHO05D005948 2.0e-16 90.5 53 77.4
TPR.G18056 Trifolium pratense HOM05D005054 ORTHO05D005948 7.9e-13 78.6 47 87.2
Cre07.g340650 Chlamydomonas reinhardtii HOM05D005054 ORTHO05D005948 1.4e-12 77.8 189 32.8
Aa31LG2G17830 Aethionema arabicum HOM05D005054 ORTHO05D005948 1.1e-11 74.7 86 51.2
EL10Ac1g01779 Beta vulgaris HOM05D005054 ORTHO05D005948 3.7e-10 69.7 40 80.0
Zm00001eb260650 Zea mays HOM05D005054 ORTHO05D005948 4.8e-10 69.3 56 66.1
CSS0035454 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D015543 1.9e-06 57.4 57 56.1


User provided reference genes

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