Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr08g0244191 Lupinus albus HOM05D003337 ORTHO05D003808 0.0e+00 1291.9 669 100.0
Lalb_Chr23g0268451 Lupinus albus HOM05D003337 ORTHO05D003808 0.0e+00 1082.4 692 83.4
Lalb_Chr11g0063671 Lupinus albus HOM05D003337 ORTHO05D003808 0.0e+00 1076.6 686 82.9
Lj1g0009523 Lotus japonicus HOM05D003337 ORTHO05D003808 4.1e-307 1057.7 691 81.0
Glyma.04G065500 Glycine max HOM05D003337 ORTHO05D003808 2.1e-303 1045.4 691 80.0
Glyma.06G066900 Glycine max HOM05D003337 ORTHO05D003808 5.1e-302 1040.8 691 80.0
arahy.Tifrunner.gnm1.ann1.C340QI Arachis hypogaea HOM05D003337 ORTHO05D003808 6.3e-300 1033.9 691 80.0
arahy.Tifrunner.gnm1.ann1.EV8XFE Arachis hypogaea HOM05D003337 ORTHO05D003808 8.5e-297 1023.5 691 79.5
Phvul.009G091900 Phaseolus vulgaris HOM05D003337 ORTHO05D003808 2.6e-293 1011.9 691 78.4
Medtr3g106700 Medicago truncatula HOM05D003337 ORTHO05D003808 9.7e-293 1010.0 691 78.7
VMungo1309G0140 Vigna mungo HOM05D003337 ORTHO05D003808 1.5e-290 1002.7 691 77.9
QL02p021300 Quercus lobata HOM05D003337 ORTHO05D003808 5.5e-288 994.2 691 76.4
GSVIVG01035878001 Vitis vinifera HOM05D003337 ORTHO05D003808 2.1e-287 992.3 692 76.3
Psat5g029560 Pisum sativum HOM05D003337 ORTHO05D003808 2.7e-287 991.9 691 77.1
TPR.G3117 Trifolium pratense HOM05D003337 ORTHO05D003808 8.8e-286 986.9 688 78.2
COL.COLO4_18879 Corchorus olitorius HOM05D003337 ORTHO05D003808 1.6e-282 976.1 690 75.7
Manes.16G123500 Manihot esculenta HOM05D003337 ORTHO05D003808 2.6e-282 975.3 692 75.4
CiPaw.08G010200 Carya illinoinensis HOM05D003337 ORTHO05D003808 3.5e-282 974.9 691 75.5
Haze_21497 Corylus avellana HOM05D003337 ORTHO05D003808 1.3e-281 973.0 719 73.2
Dinv18205 Davidia involucrata HOM05D003337 ORTHO05D003808 1.9e-280 969.1 692 75.0
Thecc.09G022400 Theobroma cacao HOM05D003337 ORTHO05D003808 2.5e-280 968.8 692 75.0
Duzib168G1956 Durio zibethinus HOM05D003337 ORTHO05D003808 6.1e-279 964.1 693 75.0
Sabra18G0028200 Salix brachista HOM05D003337 ORTHO05D003808 2.3e-278 962.2 692 74.3
CiPaw.07G224800 Carya illinoinensis HOM05D003337 ORTHO05D003808 1.4e-275 953.0 693 73.6
Atru.chr7.2458 Acer truncatum HOM05D003337 ORTHO05D003808 2.4e-275 952.2 692 74.1
Prupe.1G482800 Prunus persica HOM05D003337 ORTHO05D003808 5.3e-275 951.0 692 74.6
Ciclev10007238m.g Citrus clementina HOM05D003337 ORTHO05D003808 1.6e-274 949.5 692 74.7
FAN24G1139 Fragaria x ananassa HOM05D003337 ORTHO05D003808 2.7e-274 948.7 693 72.7
FvH4_2g28850 Fragaria vesca HOM05D003337 ORTHO05D003808 3.5e-274 948.3 691 72.8
RcHm_v2.0_Chr6g0297611 Rosa chinensis HOM05D003337 ORTHO05D003808 1.3e-273 946.4 691 73.2
FAN27G2849 Fragaria x ananassa HOM05D003337 ORTHO05D003808 1.9e-272 942.6 693 72.7
CSS0014408 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 1.2e-271 939.9 691 71.5
CSS0019364 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 3.6e-271 938.3 691 71.5
FAN20G0291 Fragaria x ananassa HOM05D003337 ORTHO05D003808 1.0e-270 936.8 693 72.0
Potri.006G256400 Populus trichocarpa HOM05D003337 ORTHO05D003808 1.8e-270 936.0 692 73.1
Potri.018G025600 Populus trichocarpa HOM05D003337 ORTHO05D003808 1.8e-270 936.0 696 72.8
Manes.03G013300 Manihot esculenta HOM05D003337 ORTHO05D003808 4.0e-270 934.9 690 72.3
FAN15G2120 Fragaria x ananassa HOM05D003337 ORTHO05D003808 2.0e-269 932.6 693 72.0
MD15G1127100 Malus domestica HOM05D003337 ORTHO05D003808 2.6e-269 932.2 692 72.8
Gohir.A05G055800 Gossypium hirsutum HOM05D003337 ORTHO05D003808 4.4e-269 931.4 687 73.2
MD08G1156500 Malus domestica HOM05D003337 ORTHO05D003808 8.3e-268 927.2 692 72.5
Sabra06G0200600 Salix brachista HOM05D003337 ORTHO05D003808 1.1e-267 926.8 692 72.8
Duzib187G1394 Durio zibethinus HOM05D003337 ORTHO05D003808 1.4e-267 926.4 687 72.2
Gorai.009G059100 Gossypium raimondii HOM05D003337 ORTHO05D003808 7.0e-267 924.1 688 72.7
Gorai.009G059000 Gossypium raimondii HOM05D003337 ORTHO05D003808 2.0e-266 922.5 687 72.6
Gohir.D05G057900 Gossypium hirsutum HOM05D003337 ORTHO05D003808 3.5e-266 921.8 687 72.6
Gohir.D05G058000 Gossypium hirsutum HOM05D003337 ORTHO05D003808 5.9e-266 921.0 687 72.6
Cc08_g00460 Coffea canephora HOM05D003337 ORTHO05D003808 1.5e-264 916.4 691 70.5
CSS0040129 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 2.5e-264 915.6 692 71.0
Dinv05003 Davidia involucrata HOM05D003337 ORTHO05D003808 4.7e-263 911.4 692 70.7
Oeu053108.1 Olea europaea HOM05D003337 ORTHO05D003808 1.4e-262 909.8 686 71.1
Actinidia14594 Actinidia chinensis HOM05D003337 ORTHO05D003808 1.8e-262 909.4 692 71.8
ClCG05G016760 Citrullus lanatus HOM05D003337 ORTHO05D003808 5.2e-262 907.9 692 70.8
Gohir.A05G055900 Gossypium hirsutum HOM05D003337 ORTHO05D003808 4.4e-261 904.8 688 71.8
Peaxi162Scf00136g02012 Petunia axillaris HOM05D003337 ORTHO05D003808 1.7e-260 902.9 692 70.4
TWI34G0528 Tripterygium wilfordii HOM05D003337 ORTHO05D003808 5.9e-258 894.4 689 70.5
MELO3C003713.2 Cucumis melo HOM05D003337 ORTHO05D003808 1.1e-256 890.2 690 70.3
CsaV3_3G046270 Cucumis sativus L. HOM05D003337 ORTHO05D003808 1.1e-256 890.2 690 70.0
vmacro11183 Vaccinium macrocarpon HOM05D003337 ORTHO05D003808 3.3e-256 888.6 696 69.0
Sc09g0010250 Simmondsia chinensis HOM05D003337 ORTHO05D003808 4.3e-256 888.3 692 68.4
Nitab4.5_0002042g0010 Nicotiana tabacum HOM05D003337 ORTHO05D003808 4.7e-255 884.8 691 69.2
EL10Ac2g04195 Beta vulgaris HOM05D003337 ORTHO05D003808 1.0e-254 883.6 698 68.8
Sed0015158 Sechium edule HOM05D003337 ORTHO05D003808 1.4e-254 883.2 692 69.7
Rhsim02G0202500 Rhododendron simsii HOM05D003337 ORTHO05D003808 1.8e-254 882.9 698 69.1
Nitab4.5_0004664g0060 Nicotiana tabacum HOM05D003337 ORTHO05D003808 3.0e-254 882.1 691 69.5
Migut.A00028 Erythranthe guttata HOM05D003337 ORTHO05D003808 3.4e-253 878.6 686 68.7
AUR62031541 Chenopodium quinoa HOM05D003337 ORTHO05D003808 7.5e-253 877.5 698 68.2
TWI32G1054 Tripterygium wilfordii HOM05D003337 ORTHO05D003808 7.5e-253 877.5 691 69.8
DCAR_001543 Daucus carota HOM05D003337 ORTHO05D003808 9.8e-253 877.1 689 68.7
Nn8g39563 Nelumbo nucifera HOM05D003337 ORTHO05D003808 1.3e-252 876.7 700 68.4
TAR625G0257 Trochodendron aralioides HOM05D003337 ORTHO05D003808 2.2e-252 875.9 695 69.9
AUR62012417 Chenopodium quinoa HOM05D003337 ORTHO05D003808 3.7e-252 875.2 698 68.1
Nitab4.5_0001294g0060 Nicotiana tabacum HOM05D003337 ORTHO05D003808 4.9e-252 874.8 692 69.4
TAR383G0794 Trochodendron aralioides HOM05D003337 ORTHO05D003808 4.6e-250 868.2 690 69.0
Hma1.2p1_0243F.1_g101010 Hydrangea macrophylla HOM05D003337 ORTHO05D003808 1.0e-249 867.1 693 69.1
Nitab4.5_0000165g0080 Nicotiana tabacum HOM05D003337 ORTHO05D003808 1.1e-248 863.6 692 68.6
Nn2g12124 Nelumbo nucifera HOM05D003337 ORTHO05D003808 2.5e-248 862.4 695 68.2
Lj7C724G9 Lonicera japonica HOM05D003337 ORTHO05D003808 5.6e-248 861.3 681 70.8
TAR636G2033 Trochodendron aralioides HOM05D003337 ORTHO05D003808 3.1e-246 855.5 691 68.9
ECA246G2127 Erigeron canadensis HOM05D003337 ORTHO05D003808 9.8e-245 850.5 694 67.3
CAN.G130.8 Capsicum annuum HOM05D003337 ORTHO05D003808 1.7e-244 849.7 692 66.9
Sopen06g008090 Solanum pennellii HOM05D003337 ORTHO05D003808 6.4e-244 847.8 694 67.1
MSTRG.26016 Avicennia marina HOM05D003337 ORTHO05D003808 6.0e-242 841.3 692 66.8
Sed0024031 Sechium edule HOM05D003337 ORTHO05D003808 1.7e-241 839.7 697 67.0
Hund25887 Selenicereus undatus HOM05D003337 ORTHO05D003808 1.7e-241 839.7 695 66.3
MBI14_g37827_MAGBIO Magnolia biondii HOM05D003337 ORTHO05D003808 2.3e-241 839.3 694 66.1
SalBow4G0163 Salvia bowleyana HOM05D003337 ORTHO05D003808 6.6e-241 837.8 692 65.0
Ah.16g104580 Amaranthus hybridus HOM05D003337 ORTHO05D003808 1.2e-239 833.6 699 66.0
Eucgr.C01723 Eucalyptus grandis HOM05D003337 ORTHO05D003808 1.2e-234 817.0 692 64.9
unitig_748.g8275 Utricularia gibba HOM05D003337 ORTHO05D003808 7.3e-232 807.7 686 64.7
HanXRQChr05g0134851 Helianthus annuus HOM05D003337 ORTHO05D003808 1.6e-231 806.6 694 64.8
Aqoxy7G02409 Aquilegia oxysepala HOM05D003337 ORTHO05D003808 1.3e-225 786.9 688 64.2
Lsat_1_v5_gn_5_30121 Lactuca sativa HOM05D003337 ORTHO05D003808 1.5e-224 783.5 680 65.0
SGA_v2.0_scaffold64G21955 Striga asiatica HOM05D003337 ORTHO05D003808 3.4e-221 772.3 681 62.8
Hma1.2p1_2800F.1_g328770 Hydrangea macrophylla HOM05D003337 ORTHO05D003808 3.8e-220 768.8 689 63.7
AL4G16700 Arabidopsis lyrata HOM05D003337 ORTHO05D003808 6.9e-214 748.0 691 60.3
Carub.0004s0499 Capsella rubella HOM05D003337 ORTHO05D003808 9.0e-214 747.7 691 59.8
AT2G25320 Arabidopsis thaliana HOM05D003337 ORTHO05D003808 1.2e-213 747.3 691 60.1
Thhalv10000009m.g Eutrema salsugineum HOM05D003337 ORTHO05D003808 2.2e-212 743.0 688 60.8
Sp4g04460 Schrenkiella parvula HOM05D003337 ORTHO05D003808 8.4e-212 741.1 692 60.1
PSO170G2416 Papaver somniferum HOM05D003337 ORTHO05D003808 5.4e-211 738.4 696 60.3
BraA09t40970Z Brassica rapa HOM05D003337 ORTHO05D003808 7.1e-211 738.0 692 60.0
A09p55690 Brassica napus HOM05D003337 ORTHO05D003808 9.3e-211 737.6 688 60.2
BcaB08g35177 Brassica carinata HOM05D003337 ORTHO05D003808 1.6e-210 736.9 692 59.8
CARHR116200 Cardamine hirsuta HOM05D003337 ORTHO05D003808 3.5e-210 735.7 691 60.1
PSO017G4016 Papaver somniferum HOM05D003337 ORTHO05D003808 7.9e-210 734.6 696 60.3
BcaC07g40870 Brassica carinata HOM05D003337 ORTHO05D003808 8.7e-209 731.1 688 59.6
BolC8t51439H Brassica oleracea HOM05D003337 ORTHO05D003808 1.1e-208 730.7 688 59.6
C08p38690 Brassica napus HOM05D003337 ORTHO05D003808 4.3e-208 728.8 688 59.6
Aa31sc102G10 Aethionema arabicum HOM05D003337 ORTHO05D003808 1.4e-206 723.8 693 59.0
C04p55320 Brassica napus HOM05D003337 ORTHO05D003808 1.5e-205 720.3 692 58.2
BolC4t27068H Brassica oleracea HOM05D003337 ORTHO05D003808 2.6e-205 719.5 692 58.4
BcaC02g08354 Brassica carinata HOM05D003337 ORTHO05D003808 3.4e-205 719.2 692 58.5
PGR031G1540 Punica granatum HOM05D003337 ORTHO05D003808 3.4e-205 719.2 649 62.9
A04p19680 Brassica napus HOM05D003337 ORTHO05D003808 2.1e-202 709.9 692 57.4
BraA04t17558Z Brassica rapa HOM05D003337 ORTHO05D003808 1.0e-201 707.6 692 57.2
Cpa.g.sc217.15 Carica papaya HOM05D003337 ORTHO05D003808 1.4e-198 697.2 690 59.1
HPP92_015261 Vanilla planifolia HOM05D003337 ORTHO05D003808 5.8e-197 691.8 697 56.8
SEGI_13524 Sequoiadendron giganteum HOM05D003337 ORTHO05D003808 8.7e-193 677.9 696 56.8
SHI18538 Sapria himalayana HOM05D003337 ORTHO05D003808 1.8e-190 670.2 750 55.9
BcaB06g28056 Brassica carinata HOM05D003337 ORTHO05D003808 4.3e-184 649.0 671 56.0
ATR0739G172 Amborella trichopoda HOM05D003337 ORTHO05D003808 9.7e-176 621.3 755 49.8
Mapoly0008s0250 Marchantia polymorpha HOM05D003337 ORTHO05D003808 3.6e-170 602.8 722 50.8
CDE02G1979 Ceratophyllum demersum HOM05D003337 ORTHO05D003808 1.1e-168 597.8 690 52.3
AagrBONN_evm.TU.Sc2ySwM_344.2463 Anthoceros agrestis HOM05D003337 ORTHO05D003808 3.3e-168 596.3 702 50.1
Zm00001eb184600 Zea mays HOM05D003337 ORTHO05D003808 5.7e-168 595.5 697 50.8
Pp3c2_25380 Physcomitrium patens HOM05D003337 ORTHO05D003808 5.3e-158 562.4 738 48.1
SEGI_27956 Sequoiadendron giganteum HOM05D003337 ORTHO05D003808 1.1e-142 511.5 706 46.0
Dinv41471 Davidia involucrata HOM05D003337 ORTHO05D003808 6.8e-137 492.3 689 46.7
Pp3c1_12560 Physcomitrium patens HOM05D003337 ORTHO05D003808 9.8e-136 488.4 764 42.1
SEGI_23839 Sequoiadendron giganteum HOM05D003337 ORTHO05D003808 4.3e-131 473.0 677 45.1
CBR_g20432 Chara braunii HOM05D003337 ORTHO05D003808 9.5e-131 471.9 822 39.7
SMO144G0040 Selaginella moellendorffii HOM05D003337 ORTHO05D003808 1.4e-126 458.0 691 43.7
GSVIVG01015601001 Vitis vinifera HOM05D003337 ORTHO05D003808 1.2e-122 444.9 669 44.8
Pp3c2_25330 Physcomitrium patens HOM05D003337 ORTHO05D003808 7.5e-120 435.6 738 41.1
Pp3c2_25350 Physcomitrium patens HOM05D003337 ORTHO05D003808 1.3e-119 434.9 738 41.1
HPP92_010004 Vanilla planifolia HOM05D003337 ORTHO05D003808 2.1e-106 391.0 503 49.3
CDE05G2189 Ceratophyllum demersum HOM05D003337 ORTHO05D003808 2.6e-104 384.0 656 41.0
Thecc.09G133400 Theobroma cacao HOM05D003337 ORTHO05D003808 2.0e-88 331.3 682 35.6
CSS0009940 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 2.3e-84 317.8 719 35.5
Oeu060140.1 Olea europaea HOM05D003337 ORTHO05D003808 3.9e-76 290.4 297 55.9
Solyc06g017970.4 Solanum lycopersicum HOM05D003337 ORTHO05D003808 1.1e-75 288.9 212 72.6
CANSAT25G2205 Cannabis sativa HOM05D003337 ORTHO05D003808 5.7e-67 260.0 151 88.1
Oeu012290.1 Olea europaea HOM05D003337 ORTHO05D003808 1.0e-63 249.2 192 66.7
Gohir.D06G052600 Gossypium hirsutum HOM05D003337 ORTHO05D003808 1.3e-58 232.3 675 29.8
Gorai.010G061000 Gossypium raimondii HOM05D003337 ORTHO05D003808 3.7e-58 230.7 675 29.5
Hma1.2p1_0497F.1_g166430 Hydrangea macrophylla HOM05D003337 ORTHO05D003808 4.1e-57 227.3 660 32.9
CSS0046302 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 2.6e-51 208.0 335 42.4
CSS0034669 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 4.4e-51 207.2 335 42.4
Gohir.A06G053550 Gossypium hirsutum HOM05D003337 ORTHO05D003808 5.9e-48 196.8 679 28.4
CSS0001606 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 4.2e-46 190.7 240 47.1
CSS0025992 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 5.5e-46 190.3 240 47.1
CSS0031612 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 1.0e-44 186.0 239 46.4
Potri.006G065300 Populus trichocarpa HOM05D003337 ORTHO05D003808 4.4e-43 180.6 369 35.8
vmacro15258 Vaccinium macrocarpon HOM05D003337 ORTHO05D003808 6.3e-42 176.8 512 32.6
vmacro22595 Vaccinium macrocarpon HOM05D003337 ORTHO05D003808 9.4e-38 162.9 451 32.6
CSS0042062 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 6.8e-36 156.8 335 37.3
SalBow2G3239 Salvia bowleyana HOM05D003337 ORTHO05D003808 2.8e-29 134.8 97 72.2
Psat7g005400 Pisum sativum HOM05D003492 ORTHO05D024801 1.0e-28 132.9 87 75.9
COL.COLO4_35177 Corchorus olitorius HOM05D003337 ORTHO05D003808 1.2e-27 129.4 148 47.3
SalBow2G2812 Salvia bowleyana HOM05D003337 ORTHO05D003808 1.3e-23 115.9 208 40.9
vmacro11353 Vaccinium macrocarpon HOM05D003337 ORTHO05D003808 5.6e-22 110.5 215 39.1
vmacro11261 Vaccinium macrocarpon HOM05D003337 ORTHO05D003808 7.0e-17 93.6 220 35.5
VMungo1215G1977 Vigna mungo HOM05D003337 ORTHO05D003808 3.5e-16 91.3 80 65.0
TAR629G2564 Trochodendron aralioides HOM05D003337 ORTHO05D003808 1.6e-13 82.4 48 81.2
vmacro11357 Vaccinium macrocarpon HOM05D003337 ORTHO05D003808 1.4e-12 79.3 202 36.1
VMungo0464G1554 Vigna mungo HOM05D005981 ORTHO05D007551 1.8e-12 79.0 59 72.9
GSVIVG01020797001 Vitis vinifera HOM05D007170 ORTHO05D009243 2.1e-08 65.5 356 21.6
CSS0001831 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 3.5e-08 64.7 57 54.4
CSS0038017 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 3.5e-08 64.7 57 54.4
vmacro11352 Vaccinium macrocarpon HOM05D003337 ORTHO05D003808 4.6e-08 64.3 54 61.1
HPP92_010003 Vanilla planifolia HOM05D003337 ORTHO05D003808 6.0e-08 63.9 50 58.0
CSS0019032 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 1.0e-07 63.2 57 52.6
A08p11580 Brassica napus HOM05D007170 ORTHO05D009243 1.7e-07 62.4 366 23.8
BcaC07g37864 Brassica carinata HOM05D007170 ORTHO05D009243 2.3e-07 62.0 366 24.0
BolC8t48255H Brassica oleracea HOM05D007170 ORTHO05D009243 2.3e-07 62.0 366 24.0
Psat1g132240 Pisum sativum HOM05D003337 ORTHO05D024801 5.1e-07 60.8 57 57.9
Thecc.01G177100 Theobroma cacao HOM05D007170 ORTHO05D009243 6.6e-07 60.5 365 21.1
BraA08t33150Z Brassica rapa HOM05D007170 ORTHO05D009243 8.6e-07 60.1 366 23.5


User provided reference genes

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