Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr08g0243221 Lupinus albus HOM05D005681 ORTHO05D007274 3.2e-167 591.7 297 100.0
Lj1g0012145 Lotus japonicus HOM05D005681 ORTHO05D007274 3.8e-136 488.4 297 81.5
Glyma.04G080900 Glycine max HOM05D005681 ORTHO05D007274 4.4e-132 474.9 297 80.5
Ca_15613_v3 Cicer arietinum L. HOM05D005681 ORTHO05D007274 1.7e-131 473.0 297 80.1
Glyma.06G082600 Glycine max HOM05D005681 ORTHO05D007274 1.6e-129 466.5 297 79.5
Psat0s2259g0040 Pisum sativum HOM05D005681 ORTHO05D007274 4.6e-129 464.9 297 78.1
Medtr3g110075 Medicago truncatula HOM05D005681 ORTHO05D007274 7.8e-129 464.2 294 79.3
arahy.Tifrunner.gnm1.ann1.M4G12U Arachis hypogaea HOM05D005681 ORTHO05D007274 3.3e-127 458.8 296 77.0
TPR.G1346 Trifolium pratense HOM05D005681 ORTHO05D007274 9.5e-127 457.2 299 77.6
arahy.Tifrunner.gnm1.ann1.Z4VD8H Arachis hypogaea HOM05D005681 ORTHO05D007274 2.1e-126 456.1 296 77.0
VMungo1309G2636 Vigna mungo HOM05D005681 ORTHO05D007274 3.7e-123 445.3 299 75.9
Gorai.010G110300 Gossypium raimondii HOM05D005681 ORTHO05D007274 8.3e-123 444.1 297 74.4
Duzib150G0332 Durio zibethinus HOM05D005681 ORTHO05D007274 7.0e-122 441.0 297 74.4
CiPaw.08G024200 Carya illinoinensis HOM05D005681 ORTHO05D007274 1.0e-120 437.2 299 73.2
Gohir.A06G095700 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.7e-120 436.4 297 73.7
Phvul.009G107000 Phaseolus vulgaris HOM05D005681 ORTHO05D007274 5.1e-120 434.9 297 74.7
Thecc.09G041100 Theobroma cacao HOM05D005681 ORTHO05D007274 6.6e-120 434.5 297 74.1
Manes.03G061300 Manihot esculenta HOM05D005681 ORTHO05D007274 1.6e-118 429.9 298 72.8
Gorai.009G051200 Gossypium raimondii HOM05D005681 ORTHO05D007274 2.1e-118 429.5 297 72.1
Cc08_g09110 Coffea canephora HOM05D005681 ORTHO05D007274 6.2e-118 427.9 303 71.9
Gohir.A05G047800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.8e-117 426.4 297 71.4
Gohir.D05G049900 Gossypium hirsutum HOM05D005681 ORTHO05D007274 2.3e-117 426.0 297 71.7
THA.LOC104803765 Tarenaya hassleriana HOM05D005681 ORTHO05D007274 3.1e-117 425.6 297 74.7
Ciclev10009066m.g Citrus clementina HOM05D005681 ORTHO05D007274 5.2e-117 424.9 298 71.5
Hma1.2p1_0140F.1_g063453 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 5.2e-117 424.9 297 71.0
Hma1.2p1_0140F.1_g063456 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 5.2e-117 424.9 297 71.0
QL12p029589 Quercus lobata HOM05D005681 ORTHO05D007274 1.2e-116 423.7 295 70.5
TWI32G1178 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 1.5e-116 423.3 296 73.0
CSS0039623 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 2.0e-116 422.9 299 70.2
Dinv30262 Davidia involucrata HOM05D005681 ORTHO05D007274 3.4e-116 422.2 297 71.4
Cfa013349 Carpinus fangiana HOM05D004668 ORTHO05D006460 1.7e-115 419.9 289 72.7
Solyc08g068350.3 Solanum lycopersicum HOM05D005681 ORTHO05D007274 2.2e-115 419.5 305 70.2
ClCG08G012350 Citrullus lanatus HOM05D005681 ORTHO05D007274 2.9e-115 419.1 297 71.4
COL.COLO4_18685 Corchorus olitorius HOM05D005681 ORTHO05D007274 3.7e-115 418.7 318 67.9
Actinidia31229 Actinidia chinensis HOM05D005681 ORTHO05D007274 8.3e-115 417.5 298 69.5
Dinv14236 Davidia involucrata HOM05D005681 ORTHO05D007274 2.4e-114 416.0 298 70.8
Nitab4.5_0000052g0240 Nicotiana tabacum HOM05D005681 ORTHO05D007274 2.4e-114 416.0 304 69.4
Atru.chr7.2148 Acer truncatum HOM05D005681 ORTHO05D007274 3.2e-114 415.6 297 71.4
Sopen08g022200 Solanum pennellii HOM05D005681 ORTHO05D007274 5.4e-114 414.8 308 69.2
GSVIVG01035659001 Vitis vinifera HOM05D005681 ORTHO05D007274 1.2e-113 413.7 294 70.7
PGR044G0773 Punica granatum HOM05D005681 ORTHO05D007274 2.7e-113 412.5 297 70.0
MELO3C011155.2 Cucumis melo HOM05D005681 ORTHO05D007274 3.5e-113 412.1 293 71.0
Actinidia13315 Actinidia chinensis HOM05D005681 ORTHO05D007274 7.8e-113 411.0 298 68.8
Peaxi162Scf00523g00017 Petunia axillaris HOM05D005681 ORTHO05D007274 1.0e-112 410.6 300 70.0
Nitab4.5_0011506g0010 Nicotiana tabacum HOM05D005681 ORTHO05D007274 1.3e-112 410.2 304 68.8
TAR626G1886 Trochodendron aralioides HOM05D005681 ORTHO05D007274 1.7e-112 409.8 295 68.5
Potri.006G241200 Populus trichocarpa HOM05D005681 ORTHO05D007274 6.6e-112 407.9 297 69.7
PGSC0003DMG400010842 Solanum tuberosum HOM05D005681 ORTHO05D007274 6.6e-112 407.9 308 67.9
Sed0026422 Sechium edule HOM05D005681 ORTHO05D007274 3.3e-111 405.6 295 69.5
Haze_21866 Corylus avellana HOM05D005681 ORTHO05D007274 4.3e-111 405.2 373 57.9
TWI34G0866 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 4.3e-111 405.2 284 71.5
Eucgr.C02898 Eucalyptus grandis HOM05D005681 ORTHO05D007274 5.6e-111 404.8 299 69.6
CARHR240740 Cardamine hirsuta HOM05D005681 ORTHO05D007274 9.5e-111 404.1 296 70.9
MD15G1096600 Malus domestica HOM05D005681 ORTHO05D007274 2.8e-110 402.5 280 72.1
Prupe.1G451500 Prunus persica HOM05D005681 ORTHO05D007274 2.8e-110 402.5 280 72.5
RcHm_v2.0_Chr6g0305881 Rosa chinensis HOM05D005681 ORTHO05D007274 3.6e-110 402.1 281 71.9
AL7G19000 Arabidopsis lyrata HOM05D005681 ORTHO05D007274 6.2e-110 401.4 296 70.6
Carub.0007s0774 Capsella rubella HOM05D005681 ORTHO05D007274 8.1e-110 401.0 296 69.9
AT4G32750 Arabidopsis thaliana HOM05D005681 ORTHO05D007274 1.8e-109 399.8 297 70.0
CAN.G21.34 Capsicum annuum HOM05D005681 ORTHO05D007274 1.8e-109 399.8 308 66.9
Aa31LG2G17210 Aethionema arabicum HOM05D005681 ORTHO05D007274 5.2e-109 398.3 295 71.5
Thhalv10025880m.g Eutrema salsugineum HOM05D005681 ORTHO05D007274 5.2e-109 398.3 297 69.4
BcaB03g12761 Brassica carinata HOM05D005681 ORTHO05D007274 6.8e-109 397.9 297 68.7
PSO566G0344 Papaver somniferum HOM05D005681 ORTHO05D007274 1.2e-108 397.1 298 68.5
Sc23g0005990 Simmondsia chinensis HOM05D005681 ORTHO05D007274 1.2e-108 397.1 288 67.7
Sp7g30510 Schrenkiella parvula HOM05D005681 ORTHO05D007274 1.5e-108 396.7 296 68.9
EL10Ac2g04057 Beta vulgaris HOM05D005681 ORTHO05D007274 3.4e-108 395.6 297 67.3
PSO782G3698 Papaver somniferum HOM05D005681 ORTHO05D007274 4.4e-108 395.2 298 68.1
Nn3g18081 Nelumbo nucifera HOM05D005681 ORTHO05D007274 7.6e-108 394.4 282 69.5
Sabra18G0039000 Salix brachista HOM05D005681 ORTHO05D007274 7.6e-108 394.4 297 67.7
Hund03415 Selenicereus undatus HOM05D005681 ORTHO05D007274 7.6e-108 394.4 297 67.7
BolC3t21001H Brassica oleracea HOM05D005681 ORTHO05D007274 1.7e-107 393.3 298 68.8
Sed0017759 Sechium edule HOM05D005681 ORTHO05D007274 1.7e-107 393.3 294 67.3
Rhsim07G0152800 Rhododendron simsii HOM05D005681 ORTHO05D007274 2.2e-107 392.9 297 67.7
C03p87050 Brassica napus HOM05D005681 ORTHO05D007274 2.9e-107 392.5 298 68.8
A08p17930 Brassica napus HOM05D005681 ORTHO05D007274 6.4e-107 391.3 298 69.1
BraA08t33745Z Brassica rapa HOM05D005681 ORTHO05D007274 6.4e-107 391.3 298 69.1
AUR62009315 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.9e-106 389.8 296 66.6
Potri.018G038600 Populus trichocarpa HOM05D005681 ORTHO05D007274 1.9e-106 389.8 297 67.0
MSTRG.25900 Avicennia marina HOM05D005681 ORTHO05D007274 2.4e-106 389.4 300 66.3
SalBow4G0279 Salvia bowleyana HOM05D005681 ORTHO05D007274 3.2e-106 389.0 301 64.8
SGA_v2.0_scaffold243G44291 Striga asiatica HOM05D005681 ORTHO05D007274 3.2e-106 389.0 313 64.2
Aqoxy7G01593 Aquilegia oxysepala HOM05D005681 ORTHO05D007274 2.7e-105 386.0 297 64.3
Sabra06G0188600 Salix brachista HOM05D005681 ORTHO05D007274 2.7e-105 386.0 297 66.0
Ah.10g035130 Amaranthus hybridus HOM05D005681 ORTHO05D007274 3.5e-105 385.6 297 66.3
CSS0012406 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 1.0e-104 384.0 285 67.0
FvH4_2g35990 Fragaria vesca HOM05D005681 ORTHO05D007274 5.1e-104 381.7 282 69.9
Migut.A00229 Erythranthe guttata HOM05D005681 ORTHO05D007274 8.7e-104 380.9 303 63.4
Lsat_1_v5_gn_5_33341 Lactuca sativa HOM05D005681 ORTHO05D007274 8.7e-104 380.9 302 65.2
FAN20G2636 Fragaria x ananassa HOM05D005681 ORTHO05D007274 3.3e-103 379.0 282 69.5
CANSAT80G1365 Cannabis sativa HOM05D005681 ORTHO05D007274 5.6e-103 378.3 298 67.8
MBI01_g15703_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 6.9e-101 371.3 299 66.6
vmacro05364 Vaccinium macrocarpon HOM05D005681 ORTHO05D007274 2.6e-100 369.4 281 65.5
Cpa.g.sc78.73 Carica papaya HOM05D005681 ORTHO05D007274 9.9e-100 367.5 449 47.4
Lj7A706G35 Lonicera japonica HOM05D005681 ORTHO05D007274 1.4e-98 363.6 300 64.0
MD08G1117000 Malus domestica HOM05D005681 ORTHO05D007274 3.5e-97 359.0 276 68.5
ATR0315G043 Amborella trichopoda HOM05D005681 ORTHO05D007274 2.3e-96 356.3 297 63.3
Nn2g11688 Nelumbo nucifera HOM05D005681 ORTHO05D007274 1.8e-93 346.7 249 68.7
BcaC09g52069 Brassica carinata HOM05D005681 ORTHO05D007274 1.7e-91 340.1 287 62.7
FAN15G0799 Fragaria x ananassa HOM05D004668 ORTHO05D006460 8.4e-91 337.8 258 67.8
A01p05570 Brassica napus HOM05D005681 ORTHO05D007274 1.9e-90 336.7 295 62.7
HanXRQChr08g0236281 Helianthus annuus HOM05D005681 ORTHO05D007274 2.3e-88 329.7 297 61.3
HPP92_006301 Vanilla planifolia HOM05D005681 ORTHO05D007274 6.7e-88 328.2 280 60.0
HPP92_006306 Vanilla planifolia HOM05D005681 ORTHO05D007274 3.3e-87 325.9 280 60.0
CsaV3_2G031020 Cucumis sativus L. HOM05D005681 ORTHO05D007274 4.5e-84 315.5 206 75.2
ECA246G0085 Erigeron canadensis HOM05D005681 ORTHO05D007274 1.9e-82 310.1 261 63.2
Gohir.D06G095800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.8e-80 303.5 206 73.3
BolC7t46377H Brassica oleracea HOM05D005681 ORTHO05D007274 3.3e-79 299.3 213 71.4
Os02g0272400 Oryza sativa ssp. japonica HOM05D005681 ORTHO05D007274 5.3e-77 292.0 284 53.2
Duzib168G1957 Durio zibethinus HOM05D005681 ORTHO05D007274 7.6e-76 288.1 277 57.4
Dinv30480 Davidia involucrata HOM05D005681 ORTHO05D007274 6.5e-75 285.0 263 58.2
AUR62043614 Chenopodium quinoa HOM05D005681 ORTHO05D007274 4.2e-74 282.3 296 52.7
AUR62029668 Chenopodium quinoa HOM05D005681 ORTHO05D007274 4.6e-73 278.9 296 52.4
Zm00001eb203450 Zea mays HOM05D005681 ORTHO05D007274 3.9e-72 275.8 286 51.0
CDE04G0437 Ceratophyllum demersum HOM05D005681 ORTHO05D007274 8.7e-72 274.6 275 52.0
AagrBONN_evm.TU.Sc2ySwM_362.2150 Anthoceros agrestis HOM05D005681 ORTHO05D007274 1.3e-70 270.8 277 50.9
Mapoly0093s0011 Marchantia polymorpha HOM05D005681 ORTHO05D007274 6.5e-67 258.5 273 51.3
BcaNung03601 Brassica carinata HOM05D005681 ORTHO05D007274 2.3e-64 250.0 257 57.6
DCAR_000748 Daucus carota HOM05D005681 ORTHO05D007274 2.3e-64 250.0 166 72.3
Pp3c7_12500 Physcomitrium patens HOM05D005681 ORTHO05D007274 2.3e-64 250.0 272 48.5
Lsat_1_v5_gn_1_49740 Lactuca sativa HOM05D005681 ORTHO05D007274 3.3e-63 246.1 281 48.4
Oeu008286.1 Olea europaea HOM05D005681 ORTHO05D007274 3.3e-63 246.1 165 72.1
Pp3c2_21260 Physcomitrium patens HOM05D005681 ORTHO05D007274 5.3e-61 238.8 275 48.7
Oeu008289.1 Olea europaea HOM05D005681 ORTHO05D007274 4.5e-60 235.7 165 69.7
SMO347G0207 Selaginella moellendorffii HOM05D005681 ORTHO05D007274 1.2e-57 227.6 305 44.9
BraA01t00528Z Brassica rapa HOM05D005681 ORTHO05D007274 4.7e-57 225.7 167 70.1
C07p59310 Brassica napus HOM05D005681 ORTHO05D007274 3.7e-54 216.1 269 49.1
BcaNung04523 Brassica carinata HOM05D005681 ORTHO05D007274 2.2e-51 206.8 250 51.2
AUR62043618 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.3e-38 164.5 119 69.7
Oeu012191.1 Olea europaea HOM05D005681 ORTHO05D007274 3.0e-32 143.3 133 55.6
MBI01_g30752_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 1.7e-30 137.5 139 56.1
Oeu031829.2 Olea europaea HOM05D005681 ORTHO05D007274 1.6e-17 94.4 134 44.8
ATR0051G031 Amborella trichopoda HOM05D005681 ORTHO05D007274 1.0e-16 91.7 84 56.0
A03p61560 Brassica napus HOM05D005681 ORTHO05D040333 1.3e-14 84.7 246 35.0
BraA03t15198Z Brassica rapa HOM05D005681 ORTHO05D040333 4.0e-08 63.2 184 33.7


User provided reference genes

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