Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr08g0243151 Lupinus albus HOM05D005302 ORTHO05D006422 7.6e-307 1056.2 490 100.0
Medtr3g110160 Medicago truncatula HOM05D005302 ORTHO05D006422 9.5e-241 836.6 493 77.7
Glyma.04G082500 Glycine max HOM05D005302 ORTHO05D006422 2.3e-239 832.0 493 78.7
Glyma.06G084100 Glycine max HOM05D005302 ORTHO05D006422 5.8e-238 827.4 493 78.3
Psat5g022320 Pisum sativum HOM05D005302 ORTHO05D006422 5.8e-238 827.4 503 76.7
VMungo1309G1003 Vigna mungo HOM05D005302 ORTHO05D006422 9.8e-238 826.6 495 77.6
Ca_15604_v3 Cicer arietinum L. HOM05D005302 ORTHO05D006422 6.0e-235 817.4 481 78.0
Phvul.009G108200 Phaseolus vulgaris HOM05D005302 ORTHO05D006422 6.0e-235 817.4 486 77.4
Lj1g0022106 Lotus japonicus HOM05D005302 ORTHO05D006422 6.2e-232 807.4 425 84.9
RcHm_v2.0_Chr6g0306001 Rosa chinensis HOM05D005302 ORTHO05D006422 3.9e-226 788.1 488 73.4
PGR044G1364 Punica granatum HOM05D005302 ORTHO05D006422 6.6e-226 787.3 435 78.6
MD15G1095400 Malus domestica HOM05D005302 ORTHO05D006422 1.5e-225 786.2 465 75.5
CiPaw.08G024700 Carya illinoinensis HOM05D005302 ORTHO05D006422 3.3e-225 785.0 454 76.0
arahy.Tifrunner.gnm1.ann1.P7Z4SB Arachis hypogaea HOM05D005302 ORTHO05D006422 2.8e-224 781.9 427 81.7
FvH4_2g35770 Fragaria vesca HOM05D005302 ORTHO05D006422 2.8e-224 781.9 489 73.0
arahy.Tifrunner.gnm1.ann1.R6A5BY Arachis hypogaea HOM05D005302 ORTHO05D006422 1.4e-223 779.6 427 81.5
Actinidia13324 Actinidia chinensis HOM05D005302 ORTHO05D006422 3.1e-223 778.5 425 80.2
Dinv14245 Davidia involucrata HOM05D005302 ORTHO05D006422 4.4e-222 774.6 425 78.4
Prupe.1G450300 Prunus persica HOM05D005302 ORTHO05D006422 5.8e-222 774.2 444 77.9
FAN27G3010 Fragaria x ananassa HOM05D005302 ORTHO05D006422 2.9e-221 771.9 489 72.4
Rhsim02G0179400 Rhododendron simsii HOM05D005302 ORTHO05D006422 1.4e-220 769.6 444 77.3
Gorai.009G050600 Gossypium raimondii HOM05D005302 ORTHO05D006422 2.4e-220 768.8 473 72.7
Potri.018G040200 Populus trichocarpa HOM05D005302 ORTHO05D006422 4.2e-220 768.1 454 75.6
QL12p029391 Quercus lobata HOM05D005302 ORTHO05D006422 4.2e-220 768.1 518 69.3
TWI34G0390 Tripterygium wilfordii HOM05D005302 ORTHO05D006422 5.4e-220 767.7 439 77.4
CSS0024291 Camellia sinensis var. sinensis HOM05D005302 ORTHO05D006422 9.2e-220 766.9 452 75.2
CSS0027627 Camellia sinensis var. sinensis HOM05D005302 ORTHO05D006422 9.2e-220 766.9 452 75.2
CsaV3_2G030970 Cucumis sativus L. HOM05D005302 ORTHO05D006422 9.2e-220 766.9 446 75.6
MELO3C011150.2 Cucumis melo HOM05D005302 ORTHO05D006422 1.2e-219 766.5 446 75.6
Gohir.D05G049300 Gossypium hirsutum HOM05D005302 ORTHO05D006422 2.7e-219 765.4 473 72.3
Hma1.2p1_0393F.1_g143080 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 6.0e-219 764.2 425 78.4
CiPaw.07G205300 Carya illinoinensis HOM05D005302 ORTHO05D006422 7.8e-219 763.8 504 69.8
MD08G1115600 Malus domestica HOM05D005302 ORTHO05D006422 1.3e-218 763.1 437 76.9
GSVIVG01035645001 Vitis vinifera HOM05D005302 ORTHO05D006422 6.6e-218 760.8 425 78.4
Eucgr.C02909 Eucalyptus grandis HOM05D005302 ORTHO05D006422 8.7e-218 760.4 425 78.4
Atru.chr7.2133 Acer truncatum HOM05D005302 ORTHO05D006422 1.5e-217 759.6 436 75.0
Nn2g11666 Nelumbo nucifera HOM05D005302 ORTHO05D006422 4.3e-217 758.1 448 75.9
TAR624G0168 Trochodendron aralioides HOM05D005302 ORTHO05D006422 1.6e-216 756.1 434 76.7
Manes.16G072000 Manihot esculenta HOM05D005302 ORTHO05D006422 2.1e-216 755.7 453 73.7
EL10Ac2g04046 Beta vulgaris HOM05D005302 ORTHO05D006422 6.2e-216 754.2 481 71.7
Migut.A00220 Erythranthe guttata HOM05D005302 ORTHO05D006422 2.6e-214 748.8 429 75.5
COL.COLO4_18671 Corchorus olitorius HOM05D005302 ORTHO05D006422 4.9e-213 744.6 476 70.0
Cc08_g09240 Coffea canephora HOM05D005302 ORTHO05D006422 6.4e-213 744.2 506 67.4
Sed0007027 Sechium edule HOM05D005302 ORTHO05D006422 8.4e-213 743.8 436 75.0
Thecc.09G042800 Theobroma cacao HOM05D005302 ORTHO05D006422 1.1e-212 743.4 456 71.1
ECA246G0277 Erigeron canadensis HOM05D005302 ORTHO05D006422 4.2e-212 741.5 453 72.0
PSO210G0275 Papaver somniferum HOM05D005302 ORTHO05D006422 5.4e-212 741.1 442 73.8
CANSAT25G0630 Cannabis sativa HOM05D005302 ORTHO05D006422 9.3e-212 740.3 483 68.7
Ciclev10008169m.g Citrus clementina HOM05D005302 ORTHO05D006422 1.2e-211 740.0 491 68.2
Nitab4.5_0010908g0010 Nicotiana tabacum HOM05D005302 ORTHO05D006422 1.2e-211 740.0 469 70.4
Sabra18G0040100 Salix brachista HOM05D005302 ORTHO05D006422 1.2e-211 740.0 452 73.5
PSO210G3865 Papaver somniferum HOM05D005302 ORTHO05D006422 3.5e-211 738.4 442 73.8
SGA_v2.0_scaffold103G29944 Striga asiatica HOM05D005302 ORTHO05D006422 3.5e-211 738.4 431 74.5
Haze_21877 Corylus avellana HOM05D005302 ORTHO05D006422 4.6e-211 738.0 478 69.7
Peaxi162Scf00822g00210 Petunia axillaris HOM05D005302 ORTHO05D006422 1.7e-210 736.1 448 71.4
Duzib150G0232 Durio zibethinus HOM05D005302 ORTHO05D006422 3.0e-210 735.3 425 74.4
Aqoxy7G03804 Aquilegia oxysepala HOM05D005302 ORTHO05D006422 3.9e-210 734.9 449 72.4
Sp7g30530 Schrenkiella parvula HOM05D005302 ORTHO05D006422 5.1e-210 734.6 488 67.2
Gohir.A05G047400 Gossypium hirsutum HOM05D005302 ORTHO05D006422 1.5e-209 733.0 451 72.5
FAN20G2881 Fragaria x ananassa HOM05D005302 ORTHO05D006422 1.9e-209 732.6 524 66.8
CAN.G21.50 Capsicum annuum HOM05D005302 ORTHO05D006422 2.5e-209 732.3 447 70.9
AUR62009303 Chenopodium quinoa HOM05D005302 ORTHO05D006422 2.5e-209 732.3 464 71.3
MSTRG.11705 Avicennia marina HOM05D005302 ORTHO05D006422 4.3e-209 731.5 426 74.6
HanXRQChr08g0236291 Helianthus annuus HOM05D005302 ORTHO05D006422 9.6e-209 730.3 427 75.6
Gohir.A07G022700 Gossypium hirsutum HOM05D005302 ORTHO05D006422 3.6e-208 728.4 457 71.1
Gohir.D07G026100 Gossypium hirsutum HOM05D005302 ORTHO05D006422 1.8e-207 726.1 457 70.7
Gorai.001G027200 Gossypium raimondii HOM05D005302 ORTHO05D006422 1.8e-207 726.1 486 67.9
CARHR240760 Cardamine hirsuta HOM05D005302 ORTHO05D006422 2.4e-207 725.7 488 68.6
Aa31LG2G17190 Aethionema arabicum HOM05D005302 ORTHO05D006422 4.0e-207 724.9 491 67.6
Carub.0007s0772 Capsella rubella HOM05D005302 ORTHO05D006422 4.0e-207 724.9 474 67.5
PGSC0003DMG400029051 Solanum tuberosum HOM05D005302 ORTHO05D006422 6.9e-207 724.2 467 69.0
SalBow4G1479 Salvia bowleyana HOM05D005302 ORTHO05D006422 1.5e-206 723.0 431 73.3
C07p59340 Brassica napus HOM05D005302 ORTHO05D006422 1.3e-205 719.9 472 67.6
BolC7t46379H Brassica oleracea HOM05D005302 ORTHO05D006422 1.7e-205 719.5 472 67.6
Thhalv10025006m.g Eutrema salsugineum HOM05D005302 ORTHO05D006422 1.7e-205 719.5 440 71.1
Sopen08g022330 Solanum pennellii HOM05D005302 ORTHO05D006422 3.8e-205 718.4 467 68.7
LjContig00226g0022694 Lotus japonicus HOM05D005302 ORTHO05D006422 4.9e-205 718.0 380 85.0
LjContig00518g0000858 Lotus japonicus HOM05D005302 ORTHO05D006422 4.9e-205 718.0 380 85.0
FAN15G3230 Fragaria x ananassa HOM05D005302 ORTHO05D006422 8.4e-205 717.2 519 65.5
Solyc08g068570.4 Solanum lycopersicum HOM05D005302 ORTHO05D006422 1.4e-204 716.5 467 68.5
A03p61580 Brassica napus HOM05D005302 ORTHO05D006422 3.2e-204 715.3 473 67.4
BraA03t15200Z Brassica rapa HOM05D005302 ORTHO05D006422 3.2e-204 715.3 473 67.4
AT4G32770 Arabidopsis thaliana HOM05D005302 ORTHO05D006422 7.1e-204 714.1 464 68.5
AL7G18970 Arabidopsis lyrata HOM05D005302 ORTHO05D006422 1.2e-203 713.4 442 70.1
Lj8C588T0 Lonicera japonica HOM05D005302 ORTHO05D006422 1.6e-203 713.0 472 69.7
ClCG08G012300 Citrullus lanatus HOM05D005302 ORTHO05D006422 1.0e-202 710.3 453 71.1
CDE08G0186 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 2.5e-201 705.7 426 70.4
DCAR_003119 Daucus carota HOM05D005302 ORTHO05D006422 2.5e-201 705.7 454 69.8
Lsat_1_v5_gn_5_33600 Lactuca sativa HOM05D005302 ORTHO05D006422 3.3e-201 705.3 449 69.5
Os02g0276500 Oryza sativa ssp. japonica HOM05D005302 ORTHO05D006422 7.6e-198 694.1 425 71.8
unitig_32.g11070 Utricularia gibba HOM05D005302 ORTHO05D006422 1.0e-197 693.7 464 66.2
Lj1g0000494 Lotus japonicus HOM05D005302 ORTHO05D006422 3.8e-197 691.8 380 83.4
ATR0315G120 Amborella trichopoda HOM05D005302 ORTHO05D006422 3.2e-196 688.7 425 70.4
MBI04_g05261_MAGBIO Magnolia biondii HOM05D005302 ORTHO05D006422 3.0e-194 682.2 517 60.7
Nitab4.5_0000513g0060 Nicotiana tabacum HOM05D005302 ORTHO05D006422 2.0e-190 669.5 508 61.4
CDE05G0893 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 2.6e-190 669.1 449 63.9
Oeu036363.2 Olea europaea HOM05D005302 ORTHO05D006422 7.6e-190 667.5 426 72.3
THA.LOC104803808 Tarenaya hassleriana HOM05D005302 ORTHO05D006422 1.0e-189 667.2 416 71.2
AUR62041718 Chenopodium quinoa HOM05D005302 ORTHO05D006422 4.6e-187 658.3 460 67.2
Sc23g0005290 Simmondsia chinensis HOM05D005302 ORTHO05D006422 3.9e-186 655.2 366 77.9
Lj1g0015489 Lotus japonicus HOM05D005302 ORTHO05D006422 1.4e-183 646.7 425 72.7
Hund19525 Selenicereus undatus HOM05D005302 ORTHO05D006422 3.1e-183 645.6 491 64.2
Cpa.g.sc7.259 Carica papaya HOM05D005302 ORTHO05D006422 4.1e-183 645.2 378 74.9
HPP92_005269 Vanilla planifolia HOM05D005302 ORTHO05D006422 1.0e-173 614.0 477 61.2
Ah.16g105570 Amaranthus hybridus HOM05D005302 ORTHO05D006422 1.7e-173 613.2 360 75.0
Cfa013434 Carpinus fangiana HOM05D005302 ORTHO05D006422 2.7e-171 605.9 354 75.4
Cfa013357 Carpinus fangiana HOM05D005302 ORTHO05D006422 2.3e-170 602.8 425 64.0
AagrBONN_evm.TU.Sc2ySwM_368.1981 Anthoceros agrestis HOM05D005302 ORTHO05D006422 2.2e-168 596.3 419 63.0
Mapoly0027s0036 Marchantia polymorpha HOM05D005302 ORTHO05D006422 1.3e-165 587.0 442 58.6
Pp3c7_470 Physcomitrium patens HOM05D005302 ORTHO05D006422 6.5e-165 584.7 428 61.4
Cfa013356 Carpinus fangiana HOM05D005302 ORTHO05D006422 1.5e-164 583.6 325 76.9
vmacro11066 Vaccinium macrocarpon HOM05D005302 ORTHO05D006422 5.5e-164 581.6 408 66.7
Lj1g0026118 Lotus japonicus HOM05D005302 ORTHO05D006422 1.4e-162 577.0 426 66.9
Haze_21992 Corylus avellana HOM05D005302 ORTHO05D006422 9.7e-161 570.9 518 54.8
Pp3c20_5100 Physcomitrium patens HOM05D005302 ORTHO05D006422 1.1e-151 540.8 449 55.5
SMO351G0603 Selaginella moellendorffii HOM05D005302 ORTHO05D006422 7.2e-148 528.1 396 57.8
Zm00001eb237270 Zea mays HOM05D005302 ORTHO05D006422 7.0e-143 511.5 320 69.1
CBR_g222 Chara braunii HOM05D005302 ORTHO05D006422 8.9e-138 494.6 444 53.8
Cc07_g15020 Coffea canephora HOM05D005302 ORTHO05D006422 2.6e-129 466.5 269 73.6
Hma1.2p1_1884F.1_g306470 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 2.8e-123 446.4 249 79.9
Cre01.g013801 Chlamydomonas reinhardtii HOM05D005302 ORTHO05D006422 4.6e-102 375.9 454 40.7
Lj7A704G80 Lonicera japonica HOM05D005302 ORTHO05D006422 1.4e-98 364.4 218 70.2
Hma1.2p1_1884F.1_g306480 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 1.2e-81 308.1 184 71.2
Lj7A704G81 Lonicera japonica HOM05D005302 ORTHO05D006422 1.6e-75 287.7 162 79.0
MCO11G337 Micromonas commoda HOM05D005302 ORTHO05D006422 5.5e-71 272.7 422 39.6
CDE05G2043 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 1.3e-67 261.5 394 37.3
Hma1.2p1_0393F.1_g143070 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 1.2e-62 245.0 148 68.9
Glyma.04G082300 Glycine max HOM05D005302 ORTHO05D006422 4.3e-60 236.5 174 64.4
Hma1.2p1_0393F.1_g143090 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 3.4e-57 226.9 126 80.2
SEGI_29042 Sequoiadendron giganteum HOM05D005302 ORTHO05D006422 5.0e-56 223.0 110 86.4
SEGI_31241 Sequoiadendron giganteum HOM05D005302 ORTHO05D006422 6.5e-48 196.1 148 55.4
FAN24G1627 Fragaria x ananassa HOM05D005302 ORTHO05D006422 3.2e-47 193.7 117 71.8
Sabra18G0041600 Salix brachista HOM05D005302 ORTHO05D006422 5.9e-41 172.9 110 69.1
SEGI_07805 Sequoiadendron giganteum HOM05D005302 ORTHO05D006422 9.4e-39 165.6 117 66.7
Potri.006G240100 Populus trichocarpa HOM05D005302 ORTHO05D006422 1.6e-38 164.9 185 46.5
arahy.Tifrunner.gnm1.ann1.B6YE6K Arachis hypogaea HOM05D005302 ORTHO05D006422 3.8e-32 143.7 186 44.6
CDE05G1694 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 4.1e-18 97.1 61 67.2
Sabra18G0041700 Salix brachista HOM05D005302 ORTHO05D006422 5.0e-16 90.1 60 60.0
CDE02G1858 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 1.0e-08 65.9 102 39.2
TPR.G33960 Trifolium pratense HOM05D005302 ORTHO05D006422 2.5e-07 61.2 38 71.1
BcaC09g52073 Brassica carinata HOM05D002602 ORTHO05D002661 2.8e-06 57.8 41 53.7


User provided reference genes

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