Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr08g0241451 Lupinus albus HOM05D004006 ORTHO05D004585 4.1e-105 384.8 202 100.0
Lalb_Chr23g0271011 Lupinus albus HOM05D004006 ORTHO05D004585 6.0e-64 248.1 202 63.4
Glyma.06G113000 Glycine max HOM05D004006 ORTHO05D004585 7.1e-57 224.6 201 67.7
Lj1g0016270 Lotus japonicus HOM05D004006 ORTHO05D004585 1.2e-56 223.8 211 59.7
Glyma.04G249900 Glycine max HOM05D004006 ORTHO05D004585 4.6e-56 221.9 200 61.5
Ca_16556_v3 Cicer arietinum L. HOM05D004006 ORTHO05D004585 1.9e-54 216.5 226 63.7
Medtr3g088010 Medicago truncatula HOM05D004006 ORTHO05D004585 2.5e-54 216.1 218 63.8
Phvul.009G124900 Phaseolus vulgaris HOM05D004006 ORTHO05D004585 5.2e-52 208.4 210 61.0
TPR.G21067 Trifolium pratense HOM05D004006 ORTHO05D004585 2.0e-51 206.5 230 59.6
VMungo1309G2318 Vigna mungo HOM05D004006 ORTHO05D004585 1.2e-48 197.2 204 61.3
Prupe.1G498100 Prunus persica HOM05D004006 ORTHO05D004585 3.5e-48 195.7 213 52.1
Psat5g087920 Pisum sativum HOM05D004006 ORTHO05D004585 6.0e-48 194.9 206 61.7
Glyma.13G079800 Glycine max HOM05D004006 ORTHO05D004585 4.3e-46 188.7 213 57.7
Lalb_Chr10g0101721 Lupinus albus HOM05D004006 ORTHO05D004585 6.2e-45 184.9 205 52.7
arahy.Tifrunner.gnm1.ann1.J26PKP Arachis hypogaea HOM05D004006 ORTHO05D004585 1.1e-44 184.1 238 55.9
Thecc.08G124900 Theobroma cacao HOM05D004006 ORTHO05D004585 3.1e-44 182.6 215 50.2
Manes.18G077000 Manihot esculenta HOM05D004006 ORTHO05D004585 5.2e-44 181.8 220 49.5
arahy.Tifrunner.gnm1.ann1.CFE04G Arachis hypogaea HOM05D004006 ORTHO05D004585 2.0e-43 179.9 238 55.5
Dinv27317 Davidia involucrata HOM05D004006 ORTHO05D004585 2.6e-43 179.5 206 49.0
CSS0019596 Camellia sinensis var. sinensis HOM05D004006 ORTHO05D004585 3.4e-43 179.1 216 49.5
Eucgr.F04353 Eucalyptus grandis HOM05D004006 ORTHO05D004585 1.7e-42 176.8 233 47.2
Hma1.2p1_0186F.1_g081800 Hydrangea macrophylla HOM05D004006 ORTHO05D004585 2.2e-42 176.4 212 48.1
Glyma.14G150000 Glycine max HOM05D004006 ORTHO05D004585 1.9e-41 173.3 198 56.1
Duzib093G0488 Durio zibethinus HOM05D004006 ORTHO05D004585 2.4e-41 172.9 208 49.5
FAN24G3177 Fragaria x ananassa HOM05D004006 ORTHO05D004585 4.2e-41 172.2 207 49.3
FvH4_2g26860 Fragaria vesca HOM05D004006 ORTHO05D004585 1.2e-40 170.6 207 48.8
FAN27G3464 Fragaria x ananassa HOM05D004006 ORTHO05D004585 1.6e-40 170.2 208 51.0
RcHm_v2.0_Chr6g0295711 Rosa chinensis HOM05D004006 ORTHO05D004585 4.6e-40 168.7 207 48.8
TWI56G0850 Tripterygium wilfordii HOM05D004006 ORTHO05D004585 4.6e-40 168.7 217 46.5
MD15G1349700 Malus domestica HOM05D004006 ORTHO05D004585 6.0e-40 168.3 214 47.2
MD08G1163000 Malus domestica HOM05D004006 ORTHO05D004585 1.0e-39 167.5 211 48.3
CSS0040709 Camellia sinensis var. sinensis HOM05D004006 ORTHO05D004585 2.3e-39 166.4 213 47.9
FAN20G2831 Fragaria x ananassa HOM05D004006 ORTHO05D004585 2.3e-39 166.4 208 50.5
TWI36G0058 Tripterygium wilfordii HOM05D004006 ORTHO05D004585 3.0e-39 166.0 226 46.9
Manes.02G162900 Manihot esculenta HOM05D004006 ORTHO05D004585 2.5e-38 162.9 217 46.1
Duzib116G0782 Durio zibethinus HOM05D004006 ORTHO05D004585 3.3e-38 162.5 210 47.6
Potri.002G083900 Populus trichocarpa HOM05D004006 ORTHO05D004585 4.3e-38 162.2 212 47.2
Lj7P340T24 Lonicera japonica HOM05D004006 ORTHO05D004585 9.6e-38 161.0 212 45.3
Cfa016015 Carpinus fangiana HOM05D004006 ORTHO05D004585 1.3e-37 160.6 218 48.6
CiPaw.06G030700 Carya illinoinensis HOM05D004006 ORTHO05D004585 2.8e-37 159.5 219 47.5
Gohir.D01G180600 Gossypium hirsutum HOM05D004006 ORTHO05D004585 4.8e-37 158.7 204 48.5
Gorai.002G222000 Gossypium raimondii HOM05D004006 ORTHO05D004585 4.8e-37 158.7 204 48.5
Haze_00445 Corylus avellana HOM05D004006 ORTHO05D004585 8.1e-37 157.9 219 47.5
Nn5g28281 Nelumbo nucifera HOM05D004006 ORTHO05D004585 8.1e-37 157.9 211 45.0
Actinidia21321 Actinidia chinensis HOM05D004006 ORTHO05D004585 1.4e-36 157.1 212 47.2
Nn1g08787 Nelumbo nucifera HOM05D004006 ORTHO05D004585 1.4e-36 157.1 209 46.9
Cc10_g11860 Coffea canephora HOM05D004006 ORTHO05D004585 4.0e-36 155.6 211 43.1
Gorai.009G245700 Gossypium raimondii HOM05D004006 ORTHO05D004585 1.2e-35 154.1 207 44.4
TAR628G0258 Trochodendron aralioides HOM05D004006 ORTHO05D004585 1.2e-35 154.1 203 44.8
Gohir.A01G188900 Gossypium hirsutum HOM05D004006 ORTHO05D004585 1.5e-35 153.7 204 47.1
Gohir.D05G237300 Gossypium hirsutum HOM05D004006 ORTHO05D004585 2.6e-35 152.9 207 44.4
PGR044G2543 Punica granatum HOM05D004006 ORTHO05D004585 2.6e-35 152.9 232 44.0
THA.LOC104800196 Tarenaya hassleriana HOM05D004006 ORTHO05D004585 2.6e-35 152.9 202 47.0
vmacro00834 Vaccinium macrocarpon HOM05D004006 ORTHO05D004585 2.6e-35 152.9 212 47.2
COL.COLO4_35922 Corchorus olitorius HOM05D004006 ORTHO05D004585 3.4e-35 152.5 217 47.9
Gohir.A05G235000 Gossypium hirsutum HOM05D004006 ORTHO05D004585 4.4e-35 152.1 207 44.0
Oeu050916.1 Olea europaea HOM05D004006 ORTHO05D004585 2.9e-34 149.4 207 44.4
Sed0014468 Sechium edule HOM05D004006 ORTHO05D004585 3.8e-34 149.1 208 44.7
THA.LOC104813655 Tarenaya hassleriana HOM05D004006 ORTHO05D004585 4.9e-34 148.7 214 50.9
GSVIVG01008871001 Vitis vinifera HOM05D004006 ORTHO05D004585 4.9e-34 148.7 184 47.8
ClCG08G005630 Citrullus lanatus HOM05D004006 ORTHO05D004585 8.4e-34 147.9 199 46.7
Oeu050917.2 Olea europaea HOM05D004006 ORTHO05D004585 8.4e-34 147.9 207 44.0
CsaV3_6G034510 Cucumis sativus L. HOM05D004006 ORTHO05D004585 1.9e-33 146.7 199 46.2
MELO3C010605.2 Cucumis melo HOM05D004006 ORTHO05D004585 7.1e-33 144.8 199 45.7
Actinidia03470 Actinidia chinensis HOM05D004006 ORTHO05D004585 9.3e-33 144.4 183 47.5
Rhsim06G0103600 Rhododendron simsii HOM05D004006 ORTHO05D004585 1.6e-32 143.7 202 43.6
Potri.005G177600 Populus trichocarpa HOM05D004006 ORTHO05D004585 2.7e-32 142.9 212 43.9
Duzib041G0805 Durio zibethinus HOM05D004006 ORTHO05D004585 4.6e-32 142.1 179 46.9
Migut.C01125 Erythranthe guttata HOM05D004006 ORTHO05D004585 4.6e-32 142.1 208 40.4
Peaxi162Scf00018g00027 Petunia axillaris HOM05D004006 ORTHO05D004585 6.0e-32 141.7 217 41.5
MSTRG.22410 Avicennia marina HOM05D004006 ORTHO05D004585 7.8e-32 141.4 210 39.5
Actinidia29465 Actinidia chinensis HOM05D004006 ORTHO05D004585 1.3e-31 140.6 217 42.4
RhsimUnG0092700 Rhododendron simsii HOM05D004006 ORTHO05D004585 3.0e-31 139.4 200 43.5
TAR376G1087 Trochodendron aralioides HOM05D004006 ORTHO05D004585 3.9e-31 139.0 203 42.4
Ciclev10002301m.g Citrus clementina HOM05D004006 ORTHO05D004585 6.6e-31 138.3 224 47.3
Gorai.005G089800 Gossypium raimondii HOM05D004006 ORTHO05D004585 1.5e-30 137.1 219 44.3
AL1G35020 Arabidopsis lyrata HOM05D004006 ORTHO05D004585 3.3e-30 136.0 213 40.4
CARHR022190 Cardamine hirsuta HOM05D004006 ORTHO05D004585 4.3e-30 135.6 211 40.8
MSTRG.1442 Avicennia marina HOM05D004006 ORTHO05D004585 2.8e-29 132.9 208 39.4
Carub.0001s2127 Capsella rubella HOM05D004006 ORTHO05D004585 2.8e-29 132.9 213 39.9
Thhalv10008805m.g Eutrema salsugineum HOM05D004006 ORTHO05D004585 4.8e-29 132.1 213 40.8
AT1G21830 Arabidopsis thaliana HOM05D004006 ORTHO05D004585 6.2e-29 131.7 214 38.3
Gohir.D02G080400 Gossypium hirsutum HOM05D004006 ORTHO05D004585 1.1e-28 131.0 220 43.6
Nitab4.5_0016080g0010 Nicotiana tabacum HOM05D004006 ORTHO05D004585 3.1e-28 129.4 213 43.2
Oeu047951.1 Olea europaea HOM05D004006 ORTHO05D004585 3.1e-28 129.4 193 41.5
Gohir.A02G073100 Gossypium hirsutum HOM05D004006 ORTHO05D004585 1.2e-27 127.5 220 44.5
Sp1g19380 Schrenkiella parvula HOM05D004006 ORTHO05D004585 1.5e-27 127.1 204 39.2
SGA_v2.0_scaffold52G18967 Striga asiatica HOM05D004006 ORTHO05D004585 1.5e-27 127.1 208 42.3
BcaB03g14254 Brassica carinata HOM05D004006 ORTHO05D004585 2.6e-27 126.3 205 39.0
BcaC07g39124 Brassica carinata HOM05D004006 ORTHO05D004585 4.5e-27 125.6 212 39.6
C08p21130 Brassica napus HOM05D004006 ORTHO05D004585 4.5e-27 125.6 212 39.6
BolC8t49750H Brassica oleracea HOM05D004006 ORTHO05D004585 4.5e-27 125.6 212 39.6
CANSAT25G0779 Cannabis sativa HOM05D004006 ORTHO05D004585 5.8e-27 125.2 246 43.9
PGSC0003DMG400027788 Solanum tuberosum HOM05D004006 ORTHO05D004585 7.6e-27 124.8 210 47.1
BcaC06g34904 Brassica carinata HOM05D004006 ORTHO05D004585 1.3e-26 124.0 206 39.3
C07p21950 Brassica napus HOM05D004006 ORTHO05D004585 1.3e-26 124.0 206 39.3
BolC7t42725H Brassica oleracea HOM05D004006 ORTHO05D004585 1.3e-26 124.0 206 39.3
Aqoxy6G00215 Aquilegia oxysepala HOM05D004006 ORTHO05D004585 2.2e-26 123.2 222 38.3
A08p28790 Brassica napus HOM05D004006 ORTHO05D004585 2.2e-26 123.2 209 38.3
BraA08t34808Z Brassica rapa HOM05D004006 ORTHO05D004585 2.2e-26 123.2 209 38.3
Oeu026152.1 Olea europaea HOM05D004006 ORTHO05D004585 4.9e-26 122.1 189 41.3
A07p14920 Brassica napus HOM05D004006 ORTHO05D004585 1.1e-25 120.9 206 38.8
BraA07t29235Z Brassica rapa HOM05D004006 ORTHO05D004585 1.1e-25 120.9 206 38.8
Dinv07222 Davidia involucrata HOM05D004006 ORTHO05D004585 1.4e-25 120.6 155 51.6
MBI16_g07656_MAGBIO Magnolia biondii HOM05D004006 ORTHO05D004585 1.4e-25 120.6 191 44.0
BraA06t24881Z Brassica rapa HOM05D004006 ORTHO05D004585 3.2e-25 119.4 216 38.9
CDE02G3357 Ceratophyllum demersum HOM05D004006 ORTHO05D004585 3.2e-25 119.4 206 38.3
BcaB07g32179 Brassica carinata HOM05D004006 ORTHO05D004585 4.2e-25 119.0 207 37.7
BcaB07g32181 Brassica carinata HOM05D004006 ORTHO05D004585 4.2e-25 119.0 216 38.4
BcaC05g26103 Brassica carinata HOM05D004006 ORTHO05D004585 4.2e-25 119.0 216 38.4
A06p17910 Brassica napus HOM05D004006 ORTHO05D004585 4.2e-25 119.0 216 38.4
C05p20810 Brassica napus HOM05D004006 ORTHO05D004585 4.2e-25 119.0 216 38.4
Solyc11g013450.2 Solanum lycopersicum HOM05D004006 ORTHO05D004585 5.4e-25 118.6 215 45.6
Oeu059434.1 Olea europaea HOM05D004006 ORTHO05D004585 7.1e-25 118.2 192 39.6
BolC5t30780H Brassica oleracea HOM05D004006 ORTHO05D004585 1.2e-24 117.5 216 38.0
Atru.chr13.1448 Acer truncatum HOM05D004006 ORTHO05D004585 1.6e-24 117.1 224 41.1
Atru.chr13.1472 Acer truncatum HOM05D004006 ORTHO05D004585 1.6e-24 117.1 224 41.1
BcaB03g11881 Brassica carinata HOM05D004006 ORTHO05D004585 2.1e-24 116.7 199 40.7
EL10Ac1g01007 Beta vulgaris HOM05D004006 ORTHO05D004585 6.0e-24 115.2 242 37.6
Nitab4.5_0000051g0220 Nicotiana tabacum HOM05D004006 ORTHO05D004585 1.0e-23 114.4 213 47.9
MSTRG.25384 Avicennia marina HOM05D004006 ORTHO05D004585 3.9e-23 112.5 202 37.1
MBI09_g12159_MAGBIO Magnolia biondii HOM05D004006 ORTHO05D004585 5.1e-23 112.1 187 39.0
CDE08G0380 Ceratophyllum demersum HOM05D004006 ORTHO05D004585 6.7e-23 111.7 188 37.2
Hund17292 Selenicereus undatus HOM05D004006 ORTHO05D004585 6.7e-23 111.7 240 36.2
Lsat_1_v5_gn_5_101481 Lactuca sativa HOM05D004006 ORTHO05D004585 2.5e-22 109.8 193 36.8
DCAR_014087 Daucus carota HOM05D004006 ORTHO05D004585 3.3e-22 109.4 190 41.1
PSO170G2295 Papaver somniferum HOM05D004006 ORTHO05D004585 3.3e-22 109.4 262 34.4
ATR0584G004 Amborella trichopoda HOM05D004006 ORTHO05D004585 9.6e-22 107.8 194 35.1
PSO528G0204 Papaver somniferum HOM05D004006 ORTHO05D004585 9.6e-22 107.8 254 33.1
SalBow7G3581 Salvia bowleyana HOM05D004006 ORTHO05D004585 1.6e-21 107.1 192 36.5
Phvul.008G163001 Phaseolus vulgaris HOM05D004006 ORTHO05D004585 2.8e-21 106.3 101 63.4
VMungo0647G1885 Vigna mungo HOM05D004006 ORTHO05D004585 3.7e-21 105.9 101 66.3
Cpa.g.sc64.85 Carica papaya HOM05D004006 ORTHO05D004585 4.8e-21 105.5 124 48.4
THA.LOC104806821 Tarenaya hassleriana HOM05D004006 ORTHO05D004585 1.8e-20 103.6 206 39.8
SGA_v2.0_scaffold24G10460 Striga asiatica HOM05D004006 ORTHO05D004585 2.4e-20 103.2 193 39.4
SGA_v2.0_scaffold25G11123 Striga asiatica HOM05D004006 ORTHO05D004585 2.4e-20 103.2 172 39.0
VMungo0647G0089 Vigna mungo HOM05D004006 ORTHO05D004585 5.3e-20 102.1 104 57.7
Gorai.009G283200 Gossypium raimondii HOM05D004006 ORTHO05D004585 1.2e-19 100.9 169 43.2
Gohir.D05G270600 Gossypium hirsutum HOM05D004006 ORTHO05D004585 2.6e-19 99.8 169 42.6
THA.LOC104817318 Tarenaya hassleriana HOM05D004006 ORTHO05D004585 2.9e-18 96.3 218 37.6
Migut.N03284 Erythranthe guttata HOM05D004006 ORTHO05D004585 4.9e-18 95.5 170 37.6
Hund26811 Selenicereus undatus HOM05D004006 ORTHO05D004585 4.2e-17 92.4 197 38.1
HanXRQChr04g0125261 Helianthus annuus HOM05D004006 ORTHO05D004585 4.6e-16 89.0 206 31.1
SalBow6G7056 Salvia bowleyana HOM05D004006 ORTHO05D004585 6.0e-16 88.6 168 34.5
Os04g0690500 Oryza sativa ssp. japonica HOM05D004006 ORTHO05D004585 1.3e-15 87.4 222 32.9
HPP92_011945 Vanilla planifolia HOM05D004006 ORTHO05D004585 2.3e-15 86.7 190 31.1
CDE06G0283 Ceratophyllum demersum HOM05D004006 ORTHO05D004585 6.7e-15 85.1 156 35.3
Sopen11g008440 Solanum pennellii HOM05D004006 ORTHO05D004585 1.5e-14 84.0 165 39.4
AL1G52380 Arabidopsis lyrata HOM05D004006 ORTHO05D004585 1.9e-14 83.6 201 28.9
CARHR035970 Cardamine hirsuta HOM05D004006 ORTHO05D004585 4.3e-14 82.4 202 31.7
Aa31LG6G9320 Aethionema arabicum HOM05D004006 ORTHO05D004585 5.7e-14 82.0 181 32.0
Aa31LG7G5780 Aethionema arabicum HOM05D004006 ORTHO05D004585 1.3e-13 80.9 161 35.4
CDE08G1629 Ceratophyllum demersum HOM05D004006 ORTHO05D004585 1.3e-13 80.9 156 34.6
Thhalv10011817m.g Eutrema salsugineum HOM05D004006 ORTHO05D004585 8.2e-13 78.2 166 34.3
AT1G44608 Arabidopsis thaliana HOM05D004006 ORTHO05D004585 1.1e-12 77.8 181 29.8
Carub.0001s3524 Capsella rubella HOM05D004006 ORTHO05D004585 1.1e-12 77.8 203 27.6
AUR62014339 Chenopodium quinoa HOM05D004006 ORTHO05D004585 3.1e-12 76.3 133 44.4
Sabra05G0134100 Salix brachista HOM05D004006 ORTHO05D004585 2.6e-11 73.2 99 39.4
BcaC08g42859 Brassica carinata HOM05D004006 ORTHO05D004585 2.2e-10 70.1 162 31.5
C06p00700 Brassica napus HOM05D004006 ORTHO05D004585 2.2e-10 70.1 162 31.5
A10p07490 Brassica napus HOM05D004006 ORTHO05D004585 2.9e-10 69.7 162 31.5
BolC6t35208H Brassica oleracea HOM05D004006 ORTHO05D004585 2.9e-10 69.7 162 30.9
BraSC36t46058Z Brassica rapa HOM05D004006 ORTHO05D004585 2.9e-10 69.7 162 31.5
Sp1g33590 Schrenkiella parvula HOM05D004006 ORTHO05D004585 3.8e-10 69.3 197 31.0
Gohir.A05G268750 Gossypium hirsutum HOM05D004006 ORTHO05D004585 4.2e-09 65.9 131 41.2
Lj4C625T3 Lonicera japonica HOM05D004006 ORTHO05D004585 4.2e-09 65.9 74 47.3
Sabra02G0065700 Salix brachista HOM05D004006 ORTHO05D004585 7.1e-09 65.1 99 38.4
unitig_46.g18107 Utricularia gibba HOM05D004006 ORTHO05D004585 3.9e-07 59.3 163 29.4
PSO017G3194 Papaver somniferum HOM05D004006 ORTHO05D004585 2.5e-06 56.6 236 33.5
HPP92_011964 Vanilla planifolia HOM05D004006 ORTHO05D004585 4.3e-06 55.8 201 23.9


User provided reference genes

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