Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr08g0241301 Lupinus albus HOM05D006264 ORTHO05D007739 3.8e-193 677.9 328 100.0
Lalb_Chr11g0066051 Lupinus albus HOM05D006264 ORTHO05D007739 9.0e-179 630.2 327 91.7
Lj1g0001411 Lotus japonicus HOM05D006264 ORTHO05D007739 1.9e-176 622.5 326 89.6
Glyma.06G115200 Glycine max HOM05D006264 ORTHO05D007739 3.2e-176 621.7 327 89.3
Glyma.04G247500 Glycine max HOM05D006264 ORTHO05D007739 1.4e-174 616.3 327 89.3
VMungo1309G2910 Vigna mungo HOM05D006264 ORTHO05D007739 2.3e-174 615.5 326 89.0
arahy.Tifrunner.gnm1.ann1.YYE7NP Arachis hypogaea HOM05D006264 ORTHO05D007739 1.5e-173 612.8 327 87.5
Phvul.009G127300 Phaseolus vulgaris HOM05D006264 ORTHO05D007739 2.0e-173 612.5 326 88.3
arahy.Tifrunner.gnm1.ann1.W8H4W4 Arachis hypogaea HOM05D006264 ORTHO05D007739 7.4e-173 610.5 327 87.2
Thecc.08G126800 Theobroma cacao HOM05D006264 ORTHO05D007739 1.2e-170 603.2 328 84.8
Medtr3g088580 Medicago truncatula HOM05D006264 ORTHO05D007739 4.5e-170 601.3 326 85.9
Ca_27657_v3 Cicer arietinum L. HOM05D006264 ORTHO05D007739 5.9e-170 600.9 327 86.9
MELO3C010482.2 Cucumis melo HOM05D006264 ORTHO05D007739 1.0e-169 600.1 328 84.1
CsaV3_4G028200 Cucumis sativus L. HOM05D006264 ORTHO05D007739 2.7e-167 592.0 328 82.6
Sed0004807 Sechium edule HOM05D006264 ORTHO05D007739 3.0e-166 588.6 328 82.3
Ciclev10001823m.g Citrus clementina HOM05D006264 ORTHO05D007739 1.5e-165 586.3 328 81.7
QL09p034323 Quercus lobata HOM05D006264 ORTHO05D007739 2.6e-165 585.5 327 82.0
TPR.G13464 Trifolium pratense HOM05D006264 ORTHO05D007739 2.6e-165 585.5 327 84.4
COL.COLO4_04990 Corchorus olitorius HOM05D006264 ORTHO05D007739 6.3e-164 580.9 328 81.7
arahy.Tifrunner.gnm1.ann1.9W7Z3M Arachis hypogaea HOM05D006264 ORTHO05D007739 8.2e-164 580.5 335 82.7
Prupe.1G494700 Prunus persica HOM05D006264 ORTHO05D007739 1.8e-163 579.3 328 82.0
Actinidia29470 Actinidia chinensis HOM05D006264 ORTHO05D007739 2.0e-162 575.9 328 80.5
Gohir.D06G045800 Gossypium hirsutum HOM05D006264 ORTHO05D007739 2.0e-162 575.9 322 83.9
Gorai.010G051000 Gossypium raimondii HOM05D006264 ORTHO05D007739 2.0e-162 575.9 322 83.9
TAR381G1225 Trochodendron aralioides HOM05D006264 ORTHO05D007739 4.5e-162 574.7 328 80.8
PGR044G1646 Punica granatum HOM05D006264 ORTHO05D007739 7.7e-162 573.9 328 81.1
CANSAT11G2315 Cannabis sativa HOM05D006264 ORTHO05D007739 1.0e-161 573.5 328 80.8
CSS0035031 Camellia sinensis var. sinensis HOM05D006264 ORTHO05D007739 1.3e-161 573.2 328 80.5
Eucgr.F04347 Eucalyptus grandis HOM05D006264 ORTHO05D007739 3.8e-161 571.6 328 80.5
Lj4C628G13 Lonicera japonica HOM05D006264 ORTHO05D007739 3.8e-161 571.6 329 80.2
MD15G1347000 Malus domestica HOM05D006264 ORTHO05D007739 1.1e-160 570.1 328 80.5
Dinv27304 Davidia involucrata HOM05D006264 ORTHO05D007739 1.9e-160 569.3 328 79.9
THA.LOC104810199 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 1.6e-159 566.2 329 80.5
MSTRG.1441 Avicennia marina HOM05D006264 ORTHO05D007739 3.6e-159 565.1 328 78.7
FAN15G0088 Fragaria x ananassa HOM05D006264 ORTHO05D007739 4.7e-159 564.7 329 79.3
Nn1g08814 Nelumbo nucifera HOM05D006264 ORTHO05D007739 8.0e-159 563.9 328 78.7
Oeu040415.1 Olea europaea HOM05D006264 ORTHO05D007739 1.8e-158 562.8 328 78.0
FAN20G0424 Fragaria x ananassa HOM05D006264 ORTHO05D007739 4.0e-158 561.6 329 79.0
RcHm_v2.0_Chr6g0295971 Rosa chinensis HOM05D006264 ORTHO05D007739 5.2e-158 561.2 328 79.0
Sp1g19320 Schrenkiella parvula HOM05D006264 ORTHO05D007739 1.5e-157 559.7 330 79.7
BcaB07g32175 Brassica carinata HOM05D006264 ORTHO05D007739 2.0e-157 559.3 330 80.3
FAN24G2929 Fragaria x ananassa HOM05D006264 ORTHO05D007739 2.0e-157 559.3 327 78.6
Aa31LG7G5740 Aethionema arabicum HOM05D006264 ORTHO05D007739 4.4e-157 558.1 330 81.2
AT1G21760 Arabidopsis thaliana HOM05D006264 ORTHO05D007739 5.7e-157 557.8 330 79.4
ClCG11G015780 Citrullus lanatus HOM05D006264 ORTHO05D007739 9.7e-157 557.0 308 82.5
Cc10_g12020 Coffea canephora HOM05D006264 ORTHO05D007739 1.7e-156 556.2 328 76.8
CARHR022150 Cardamine hirsuta HOM05D006264 ORTHO05D007739 2.8e-156 555.4 330 78.8
TAR625G1219 Trochodendron aralioides HOM05D006264 ORTHO05D007739 4.8e-156 554.7 328 76.2
BcaC05g26098 Brassica carinata HOM05D006264 ORTHO05D007739 8.2e-156 553.9 330 79.7
A06p17870 Brassica napus HOM05D006264 ORTHO05D007739 9.1e-155 550.4 346 76.6
BraA06t24877Z Brassica rapa HOM05D006264 ORTHO05D007739 2.0e-154 549.3 341 76.8
TWI60G1034 Tripterygium wilfordii HOM05D006264 ORTHO05D007739 2.7e-154 548.9 327 77.4
Haze_00430 Corylus avellana HOM05D006264 ORTHO05D007739 4.5e-154 548.1 341 77.7
Sc02g0005000 Simmondsia chinensis HOM05D006264 ORTHO05D007739 7.7e-154 547.4 328 75.6
BolC5t30776H Brassica oleracea HOM05D006264 ORTHO05D007739 1.3e-153 546.6 338 77.2
PGSC0003DMG400000884 Solanum tuberosum HOM05D006264 ORTHO05D007739 2.2e-153 545.8 328 75.3
Nitab4.5_0001996g0020 Nicotiana tabacum HOM05D006264 ORTHO05D007739 3.8e-153 545.0 325 75.4
CiPaw.05G220800 Carya illinoinensis HOM05D006264 ORTHO05D007739 6.5e-153 544.3 328 77.1
Solyc11g012830.3 Solanum lycopersicum HOM05D006264 ORTHO05D007739 2.5e-152 542.3 328 75.0
Hund17298 Selenicereus undatus HOM05D006264 ORTHO05D007739 4.2e-152 541.6 326 77.3
Carub.0001s2122 Capsella rubella HOM05D006264 ORTHO05D007739 5.5e-152 541.2 330 77.3
HanXRQChr05g0151071 Helianthus annuus HOM05D006264 ORTHO05D007739 5.5e-152 541.2 328 74.7
vmacro00839 Vaccinium macrocarpon HOM05D006264 ORTHO05D007739 7.2e-152 540.8 328 76.2
Rhsim11G0069200 Rhododendron simsii HOM05D006264 ORTHO05D007739 1.6e-151 539.7 331 75.2
FvH4_2g27090 Fragaria vesca HOM05D006264 ORTHO05D007739 1.8e-150 536.2 325 75.7
CAN.G2.26 Capsicum annuum HOM05D006264 ORTHO05D007739 3.0e-150 535.4 325 74.2
EL10Ac1g01023 Beta vulgaris HOM05D006264 ORTHO05D007739 8.8e-150 533.9 328 75.9
Aqoxy6G00234 Aquilegia oxysepala HOM05D006264 ORTHO05D007739 5.7e-149 531.2 318 76.7
C05p20770 Brassica napus HOM05D006264 ORTHO05D007739 8.3e-148 527.3 315 78.4
Duzib093G0816 Durio zibethinus HOM05D006264 ORTHO05D007739 5.4e-147 524.6 328 75.9
MBI16_g07653_MAGBIO Magnolia biondii HOM05D006264 ORTHO05D007739 1.2e-146 523.5 328 74.1
SGA_v2.0_scaffold24G10459 Striga asiatica HOM05D006264 ORTHO05D007739 1.6e-146 523.1 328 74.7
Migut.C01127 Erythranthe guttata HOM05D006264 ORTHO05D007739 1.0e-145 520.4 328 72.9
AUR62014328 Chenopodium quinoa HOM05D006264 ORTHO05D007739 7.2e-144 514.2 326 73.6
AUR62019071 Chenopodium quinoa HOM05D006264 ORTHO05D007739 7.2e-144 514.2 326 73.9
PSO528G0109 Papaver somniferum HOM05D006264 ORTHO05D007739 1.2e-143 513.5 328 72.6
PSO170G1538 Papaver somniferum HOM05D006264 ORTHO05D007739 4.7e-143 511.5 328 72.3
Manes.02G164400 Manihot esculenta HOM05D006264 ORTHO05D007739 3.0e-142 508.8 328 71.0
PSO063G0125 Papaver somniferum HOM05D006264 ORTHO05D007739 5.7e-141 504.6 328 71.0
Peaxi162Scf00914g00315 Petunia axillaris HOM05D006264 ORTHO05D007739 7.5e-141 504.2 297 75.8
Lsat_1_v5_gn_6_112861 Lactuca sativa HOM05D006264 ORTHO05D007739 1.4e-139 500.0 326 70.9
CDE02G1850 Ceratophyllum demersum HOM05D006264 ORTHO05D007739 1.2e-138 496.9 328 67.4
Potri.005G178600 Populus trichocarpa HOM05D006264 ORTHO05D007739 4.5e-138 495.0 328 71.0
Potri.002G082500 Populus trichocarpa HOM05D006264 ORTHO05D007739 1.5e-136 490.0 328 69.2
Nitab4.5_0001803g0010 Nicotiana tabacum HOM05D006264 ORTHO05D007739 1.6e-135 486.5 312 72.8
ATR0584G291 Amborella trichopoda HOM05D006264 ORTHO05D007739 1.0e-134 483.8 315 70.8
GSVIVG01008855001 Vitis vinifera HOM05D006264 ORTHO05D007739 3.7e-132 475.3 328 70.1
QL09p034368 Quercus lobata HOM05D006264 ORTHO05D007739 9.5e-128 460.7 253 83.0
unitig_748.g7689 Utricularia gibba HOM05D006264 ORTHO05D007739 1.2e-125 453.8 318 68.2
THA.LOC104801868 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 1.5e-125 453.4 255 81.2
HPP92_004401 Vanilla planifolia HOM05D006264 ORTHO05D007739 2.0e-125 453.0 325 63.1
HPP92_027807 Vanilla planifolia HOM05D006264 ORTHO05D007739 3.4e-125 452.2 325 62.8
AL1G34960 Arabidopsis lyrata HOM05D006264 ORTHO05D007739 2.4e-123 446.0 254 81.5
Thhalv10008543m.g Eutrema salsugineum HOM05D006264 ORTHO05D007739 1.6e-122 443.4 256 80.1
Pp3c3_38060 Physcomitrium patens HOM05D006264 ORTHO05D007739 8.6e-121 437.6 306 65.0
Sabra02G0064700 Salix brachista HOM05D006264 ORTHO05D007739 3.1e-118 429.1 328 63.7
Zm00001eb422580 Zea mays HOM05D006264 ORTHO05D007739 5.2e-118 428.3 328 59.5
ECA246G2185 Erigeron canadensis HOM05D006264 ORTHO05D007739 2.0e-117 426.4 277 71.5
SMO347G0097 Selaginella moellendorffii HOM05D006264 ORTHO05D007739 2.6e-117 426.0 309 61.8
Gohir.A06G045300 Gossypium hirsutum HOM05D006264 ORTHO05D007739 1.7e-116 423.3 241 80.9
DCAR_028205 Daucus carota HOM05D006264 ORTHO05D007739 1.5e-112 410.2 254 74.4
Mapoly0151s0012 Marchantia polymorpha HOM05D006264 ORTHO05D007739 1.4e-110 403.7 317 56.8
AagrBONN_evm.TU.Sc2ySwM_117.473 Anthoceros agrestis HOM05D006264 ORTHO05D007739 9.9e-109 397.5 309 57.9
Atru.chr13.1491 Acer truncatum HOM05D006264 ORTHO05D007739 9.9e-101 370.9 220 80.0
Sopen11g007570 Solanum pennellii HOM05D006264 ORTHO05D007739 8.4e-92 341.3 198 79.8
CBR_g39544 Chara braunii HOM05D006264 ORTHO05D007739 9.6e-88 327.8 312 51.0
Psat5g086280 Pisum sativum HOM05D006264 ORTHO05D007739 3.4e-85 319.3 166 84.9
Psat5g086240 Pisum sativum HOM05D006264 ORTHO05D007739 3.4e-61 239.6 132 87.9
Cpa.g.c35582 Carica papaya HOM05D006264 ORTHO05D007739 3.8e-60 236.1 144 79.9
Cpa.g.sc418.8 Carica papaya HOM05D006264 ORTHO05D007739 1.1e-48 198.0 115 78.3
PRCOL_00004228 Prasinoderma coloniale HOM05D006264 ORTHO05D007739 5.7e-48 195.7 284 39.4
MCO07G330 Micromonas commoda HOM05D006264 ORTHO05D007739 2.2e-47 193.7 308 38.3
Os04g0431200 Oryza sativa ssp. japonica HOM05D006264 ORTHO05D007739 4.5e-45 186.0 142 55.6
Cre06.g254450 Chlamydomonas reinhardtii HOM05D006264 ORTHO05D007739 1.3e-36 157.9 305 31.5
Medtr4g068980 Medicago truncatula HOM05D006264 ORTHO05D007739 2.5e-35 153.7 82 85.4
arahy.Tifrunner.gnm1.ann1.XAL0CN Arachis hypogaea HOM05D003584 ORTHO05D004148 3.4e-32 143.3 109 58.7
SEGI_39749 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 1.4e-30 137.9 111 65.8
Cpa.g.c45459 Carica papaya HOM05D006264 ORTHO05D007739 2.9e-28 130.2 78 79.5
Zm00001eb082740 Zea mays HOM05D006264 ORTHO05D007739 8.5e-28 128.6 133 51.1
Atru.chr13.1492 Acer truncatum HOM05D006264 ORTHO05D007739 6.8e-25 119.0 72 75.0
SEGI_38549 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 1.3e-23 114.8 68 66.2
Migut.B01582 Erythranthe guttata HOM05D006264 ORTHO05D007739 3.8e-20 103.2 58 77.6
PGSC0003DMG400006698 Solanum tuberosum HOM05D006264 ORTHO05D007739 1.6e-13 81.3 69 53.6
Rhsim11G0069000 Rhododendron simsii HOM05D006264 ORTHO05D007739 4.3e-11 73.2 65 55.4
Actinidia03465 Actinidia chinensis HOM05D006264 ORTHO05D007739 2.6e-08 63.9 36 77.8
SEGI_08627 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 4.9e-07 59.7 40 60.0


User provided reference genes

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