Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr08g0241161 Lupinus albus HOM05D006317 ORTHO05D007852 1.0e-58 229.9 126 100.0
Lalb_Chr23g0271161 Lupinus albus HOM05D006317 ORTHO05D007852 4.1e-55 218.0 126 94.4
Glyma.04G246100 Glycine max HOM05D006317 ORTHO05D007852 1.3e-53 213.0 126 92.1
Phvul.009G129100 Phaseolus vulgaris HOM05D006317 ORTHO05D007852 5.0e-53 211.1 126 90.5
Psat5g085080 Pisum sativum HOM05D006317 ORTHO05D007852 1.9e-52 209.1 126 90.5
Glyma.06G116700 Glycine max HOM05D006317 ORTHO05D007852 5.6e-52 207.6 126 89.7
VMungo1309G0699 Vigna mungo HOM05D006317 ORTHO05D007852 5.6e-52 207.6 126 89.7
Lj1g0010212 Lotus japonicus HOM05D006317 ORTHO05D007852 7.3e-52 207.2 126 88.1
Medtr3g088525 Medicago truncatula HOM05D006317 ORTHO05D007852 1.6e-51 206.1 126 87.3
CiPaw.15G032500 Carya illinoinensis HOM05D006317 ORTHO05D007852 2.0e-49 199.1 120 86.7
Gohir.A05G237800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 7.5e-49 197.2 120 88.3
MELO3C010655.2 Cucumis melo HOM05D006317 ORTHO05D007852 2.2e-48 195.7 120 86.7
Sed0014816 Sechium edule HOM05D006317 ORTHO05D007852 4.9e-48 194.5 120 86.7
Gohir.D05G239800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 6.4e-48 194.1 120 86.7
Gorai.009G248700 Gossypium raimondii HOM05D006317 ORTHO05D007852 6.4e-48 194.1 120 86.7
arahy.Tifrunner.gnm1.ann1.0GY0RD Arachis hypogaea HOM05D006317 ORTHO05D007852 1.1e-47 193.4 128 83.6
arahy.Tifrunner.gnm1.ann1.ID1H8K Arachis hypogaea HOM05D006317 ORTHO05D007852 1.1e-47 193.4 128 83.6
CsaV3_6G034090 Cucumis sativus L. HOM05D006317 ORTHO05D007852 3.2e-47 191.8 120 85.0
FvH4_2g27730 Fragaria vesca HOM05D006317 ORTHO05D007852 3.2e-47 191.8 120 84.2
FAN20G1754 Fragaria x ananassa HOM05D006317 ORTHO05D007852 3.2e-47 191.8 120 84.2
Sed0004620 Sechium edule HOM05D006317 ORTHO05D007852 4.1e-47 191.4 120 85.0
Thecc.08G132100 Theobroma cacao HOM05D006317 ORTHO05D007852 4.1e-47 191.4 120 85.0
Rhsim11G0071000 Rhododendron simsii HOM05D006317 ORTHO05D007852 7.0e-47 190.7 120 82.5
FAN24G3505 Fragaria x ananassa HOM05D006317 ORTHO05D007852 9.2e-47 190.3 120 83.3
Duzib041G0795 Durio zibethinus HOM05D006317 ORTHO05D007852 2.0e-46 189.1 120 83.3
Eucgr.D00248 Eucalyptus grandis HOM05D006317 ORTHO05D007852 2.0e-46 189.1 120 82.5
Hma1.2p1_0420F.1_g149670 Hydrangea macrophylla HOM05D006317 ORTHO05D007852 2.0e-46 189.1 120 83.3
RcHm_v2.0_Chr6g0296581 Rosa chinensis HOM05D006317 ORTHO05D007852 2.0e-46 189.1 120 83.3
Atru.chr13.1550 Acer truncatum HOM05D006317 ORTHO05D007852 2.7e-46 188.7 120 81.7
CSS0008085 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 3.5e-46 188.3 120 81.7
PGR044G1554 Punica granatum HOM05D006317 ORTHO05D007852 3.5e-46 188.3 120 84.2
TWI32G0551 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 3.5e-46 188.3 120 83.3
Cfa018120 Carpinus fangiana HOM05D006317 ORTHO05D007852 4.6e-46 188.0 120 81.7
Duzib116G0606 Durio zibethinus HOM05D006317 ORTHO05D007852 4.6e-46 188.0 120 83.3
Manes.02G167400 Manihot esculenta HOM05D006317 ORTHO05D007852 4.6e-46 188.0 120 82.5
TAR375G0871 Trochodendron aralioides HOM05D006317 ORTHO05D007852 4.6e-46 188.0 120 82.5
Actinidia29484 Actinidia chinensis HOM05D006317 ORTHO05D007852 7.8e-46 187.2 119 82.4
TWI34G0863 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 7.8e-46 187.2 120 81.7
Dinv27277 Davidia involucrata HOM05D006317 ORTHO05D007852 1.0e-45 186.8 120 81.7
Ciclev10002865m.g Citrus clementina HOM05D006317 ORTHO05D007852 1.3e-45 186.4 120 80.8
CSS0027136 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 1.7e-45 186.0 120 80.8
GSVIVG01036785001 Vitis vinifera HOM05D006317 ORTHO05D007852 1.7e-45 186.0 120 81.7
THA.LOC104813677 Tarenaya hassleriana HOM05D006317 ORTHO05D007852 2.3e-45 185.7 120 81.7
Dinv14667 Davidia involucrata HOM05D006317 ORTHO05D007852 3.0e-45 185.3 120 82.5
Prupe.1G490600 Prunus persica HOM05D006317 ORTHO05D007852 3.0e-45 185.3 120 80.8
QL09p032738 Quercus lobata HOM05D006317 ORTHO05D007852 3.0e-45 185.3 120 80.8
MSTRG.25364 Avicennia marina HOM05D006317 ORTHO05D007852 3.9e-45 184.9 120 79.2
CANSAT35G0412 Cannabis sativa HOM05D006317 ORTHO05D007852 3.9e-45 184.9 120 81.7
Cc10_g12550 Coffea canephora HOM05D006317 ORTHO05D007852 6.6e-45 184.1 120 80.0
Thhalv10019323m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 6.6e-45 184.1 120 81.7
CSS0006686 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 1.1e-44 183.3 120 78.3
Cpa.g.sc64.145 Carica papaya HOM05D006317 ORTHO05D007852 1.5e-44 183.0 120 80.8
Manes.18G081900 Manihot esculenta HOM05D006317 ORTHO05D007852 1.9e-44 182.6 120 80.0
Potri.019G066600 Populus trichocarpa HOM05D006317 ORTHO05D007852 1.9e-44 182.6 119 80.7
Carub.0002s2423 Capsella rubella HOM05D006317 ORTHO05D007852 2.5e-44 182.2 120 80.0
CARHR070830 Cardamine hirsuta HOM05D006317 ORTHO05D007852 2.5e-44 182.2 120 80.8
A08p28870 Brassica napus HOM05D006317 ORTHO05D007852 5.6e-44 181.0 120 79.2
Nn1g09356 Nelumbo nucifera HOM05D006317 ORTHO05D007852 9.5e-44 180.3 120 76.7
Aa31LG4G7370 Aethionema arabicum HOM05D006317 ORTHO05D007852 1.6e-43 179.5 120 79.2
Nitab4.5_0001168g0010 Nicotiana tabacum HOM05D006317 ORTHO05D007852 1.6e-43 179.5 120 78.3
Sc10g0008060 Simmondsia chinensis HOM05D006317 ORTHO05D007852 1.6e-43 179.5 120 76.7
AT1G77350 Arabidopsis thaliana HOM05D006317 ORTHO05D007852 2.8e-43 178.7 121 80.2
Oeu051968.1 Olea europaea HOM05D006317 ORTHO05D007852 2.8e-43 178.7 120 78.3
Solyc11g005000.2 Solanum lycopersicum HOM05D006317 ORTHO05D007852 2.8e-43 178.7 120 79.2
C08p20980 Brassica napus HOM05D006317 ORTHO05D007852 3.6e-43 178.3 120 77.5
BolC8t49735H Brassica oleracea HOM05D006317 ORTHO05D007852 3.6e-43 178.3 120 77.5
Peaxi162Scf01003g00121 Petunia axillaris HOM05D006317 ORTHO05D007852 3.6e-43 178.3 120 77.5
PGSC0003DMG400006049 Solanum tuberosum HOM05D006317 ORTHO05D007852 3.6e-43 178.3 120 79.2
BraA06t24865Z Brassica rapa HOM05D006317 ORTHO05D007852 4.7e-43 177.9 120 77.5
ECA246G3352 Erigeron canadensis HOM05D006317 ORTHO05D007852 4.7e-43 177.9 120 78.3
Nitab4.5_0002045g0100 Nicotiana tabacum HOM05D006317 ORTHO05D007852 6.2e-43 177.6 120 77.5
unitig_22.g5398 Utricularia gibba HOM05D006317 ORTHO05D007852 6.2e-43 177.6 120 79.2
BcaB07g32159 Brassica carinata HOM05D006317 ORTHO05D007852 8.1e-43 177.2 120 77.5
Lsat_1_v5_gn_6_109060 Lactuca sativa HOM05D006317 ORTHO05D007852 8.1e-43 177.2 120 77.5
Sopen11g001020 Solanum pennellii HOM05D006317 ORTHO05D007852 8.1e-43 177.2 120 78.3
A06p17730 Brassica napus HOM05D006317 ORTHO05D007852 1.1e-42 176.8 120 77.5
BcaB03g14259 Brassica carinata HOM05D006317 ORTHO05D007852 1.4e-42 176.4 120 79.2
BraA08t34818Z Brassica rapa HOM05D006317 ORTHO05D007852 1.8e-42 176.0 120 76.7
Oeu021883.1 Olea europaea HOM05D006317 ORTHO05D007852 2.3e-42 175.6 120 76.7
Thhalv10009123m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 3.1e-42 175.3 121 79.3
CAN.G342.14 Capsicum annuum HOM05D006317 ORTHO05D007852 6.8e-42 174.1 120 76.7
Sp1g19190 Schrenkiella parvula HOM05D006317 ORTHO05D007852 6.8e-42 174.1 120 76.7
ATR1101G062 Amborella trichopoda HOM05D006317 ORTHO05D007852 1.2e-41 173.3 120 74.2
Aqoxy1G01739 Aquilegia oxysepala HOM05D006317 ORTHO05D007852 1.5e-41 172.9 120 76.7
SalBow2G0856 Salvia bowleyana HOM05D006317 ORTHO05D007852 1.5e-41 172.9 120 76.7
BcaC06g34898 Brassica carinata HOM05D006317 ORTHO05D007852 2.0e-41 172.6 119 78.2
BolC7t42733H Brassica oleracea HOM05D006317 ORTHO05D007852 2.0e-41 172.6 119 78.2
unitig_8.g3836 Utricularia gibba HOM05D006317 ORTHO05D007852 2.0e-41 172.6 120 75.8
CDE06G2198 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 2.6e-41 172.2 120 75.8
Migut.N03266 Erythranthe guttata HOM05D006317 ORTHO05D007852 3.4e-41 171.8 112 82.1
ClCG08G005990 Citrullus lanatus HOM05D006317 ORTHO05D007852 4.4e-41 171.4 170 61.2
C07p22030 Brassica napus HOM05D006317 ORTHO05D007852 5.8e-41 171.0 118 78.0
CDE07G1891 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 7.5e-41 170.6 121 76.9
A07p14980 Brassica napus HOM05D006317 ORTHO05D007852 9.8e-41 170.2 116 76.7
BraA07t29244Z Brassica rapa HOM05D006317 ORTHO05D007852 9.8e-41 170.2 116 76.7
MBI03_g35425_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 1.3e-40 169.9 120 73.3
SGA_v2.0_scaffold25G11134 Striga asiatica HOM05D006317 ORTHO05D007852 3.7e-40 168.3 107 81.3
AL2G37550 Arabidopsis lyrata HOM05D006317 ORTHO05D007852 8.3e-40 167.2 146 67.8
AUR62016336 Chenopodium quinoa HOM05D006317 ORTHO05D007852 1.1e-39 166.8 120 73.3
Ah.01g020580 Amaranthus hybridus HOM05D006317 ORTHO05D007852 2.1e-38 162.5 120 71.7
HanXRQChr05g0148711 Helianthus annuus HOM05D006317 ORTHO05D007852 2.7e-38 162.2 113 75.2
Sabra19G0078300 Salix brachista HOM05D006317 ORTHO05D007852 1.0e-37 160.2 133 68.4
Zm00001eb128810 Zea mays HOM05D006317 ORTHO05D007852 1.7e-37 159.5 120 70.0
HPP92_021212 Vanilla planifolia HOM05D006317 ORTHO05D007852 5.1e-37 157.9 119 70.6
SHI09189 Sapria himalayana HOM05D006317 ORTHO05D007852 8.6e-37 157.1 131 64.9
Os05g0486200 Oryza sativa ssp. japonica HOM05D006317 ORTHO05D007852 3.3e-36 155.2 116 69.8
FAN27G3154 Fragaria x ananassa HOM05D006317 ORTHO05D007852 7.3e-36 154.1 91 89.0
COL.COLO4_05688 Corchorus olitorius HOM05D006317 ORTHO05D007852 1.8e-34 149.4 91 86.8
vmacro16444 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 2.0e-33 146.0 94 83.0
vmacro00858 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 2.6e-33 145.6 91 83.5
MBI06_g36652_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 2.9e-32 142.1 120 65.0
AagrBONN_evm.TU.Sc2ySwM_344.4689 Anthoceros agrestis HOM05D006317 ORTHO05D007852 8.4e-32 140.6 108 64.8
Mapoly0014s0111 Marchantia polymorpha HOM05D006317 ORTHO05D007852 1.1e-31 140.2 107 64.5
CBR_g12067 Chara braunii HOM05D006317 ORTHO05D007852 4.1e-31 138.3 105 68.6
EL10Ac9g21899 Beta vulgaris HOM05D006317 ORTHO05D007852 4.6e-30 134.8 91 78.0
SMO298G0052 Selaginella moellendorffii HOM05D006317 ORTHO05D007852 5.1e-29 131.3 101 67.3
BcaB03g14260 Brassica carinata HOM05D006317 ORTHO05D007852 6.2e-27 124.4 127 59.1
DCAR_018876 Daucus carota HOM05D006317 ORTHO05D007852 1.2e-25 120.2 69 89.9
Nn7g37402 Nelumbo nucifera HOM05D006317 ORTHO05D007852 1.2e-22 110.2 70 78.6
Haze_17997 Corylus avellana HOM05D001650 ORTHO05D001592 5.3e-18 94.7 117 47.9
Gohir.A02G071601 Gossypium hirsutum HOM05D006317 ORTHO05D007852 4.4e-17 91.7 58 86.2
CSS0043705 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 7.9e-14 80.9 46 82.6
SGA_v2.0_scaffold28G11977 Striga asiatica HOM05D006317 ORTHO05D007852 2.5e-12 75.9 52 78.8
BolC5t30761H Brassica oleracea HOM05D006317 ORTHO05D007852 5.6e-12 74.7 52 78.8
FAN15G1039 Fragaria x ananassa HOM05D006317 ORTHO05D007852 6.4e-08 61.2 37 81.1
QL05p046423 Quercus lobata HOM05D006317 ORTHO05D007852 1.1e-07 60.5 51 60.8
BcaC05g26083 Brassica carinata HOM05D006317 ORTHO05D007852 2.1e-06 56.2 40 72.5


User provided reference genes

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