Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr08g0239791 Lupinus albus HOM05D000003 ORTHO05D000004 6.3e-42 173.7 89 100.0
Medtr7g445910 Medicago truncatula HOM05D000003 ORTHO05D000004 5.2e-12 74.3 66 51.5
Atru.chr1.2428 Acer truncatum HOM05D000003 ORTHO05D000004 8.3e-10 67.0 82 42.7
CSS0047834 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.4e-09 65.5 72 45.8
Potri.004G185050 Populus trichocarpa HOM05D000003 ORTHO05D000004 2.4e-09 65.5 71 50.7
Atru.chr13.1100 Acer truncatum HOM05D000003 ORTHO05D000004 3.1e-09 65.1 82 42.7
Atru.chr4.1076 Acer truncatum HOM05D000003 ORTHO05D000004 3.1e-09 65.1 82 40.2
Medtr7g111367 Medicago truncatula HOM05D000003 ORTHO05D000004 3.1e-09 65.1 65 46.2
TPR.G20745 Trifolium pratense HOM05D000003 ORTHO05D000004 3.1e-09 65.1 72 45.8
Atru.chr2.1641 Acer truncatum HOM05D000003 ORTHO05D000004 5.4e-09 64.3 90 40.0
Medtr1g044580 Medicago truncatula HOM05D000655 ORTHO05D001635 5.4e-09 64.3 72 37.5
CSS0016144 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.0e-09 63.9 72 44.4
Atru.chr10.629 Acer truncatum HOM05D000003 ORTHO05D000004 9.2e-09 63.5 82 40.2
TPR.G32004 Trifolium pratense HOM05D000003 ORTHO05D000004 9.2e-09 63.5 57 52.6
FvH4_2g04886 Fragaria vesca HOM05D000003 ORTHO05D000004 1.2e-08 63.2 72 38.9
RcHm_v2.0_Chr1g0342611 Rosa chinensis HOM05D000003 ORTHO05D000004 1.2e-08 63.2 72 40.3
TPR.G4441 Trifolium pratense HOM05D000003 ORTHO05D000004 1.6e-08 62.8 67 41.8
RcHm_v2.0_Chr3g0492921 Rosa chinensis HOM05D000003 ORTHO05D000004 2.0e-08 62.4 72 37.5
RcHm_v2.0_Chr5g0053531 Rosa chinensis HOM05D000003 ORTHO05D000004 2.0e-08 62.4 72 37.5
FvH4_1g24182 Fragaria vesca HOM05D000003 ORTHO05D000004 2.7e-08 62.0 72 40.3
Potri.006G175124 Populus trichocarpa HOM05D000003 ORTHO05D000004 2.7e-08 62.0 72 41.7
Atru.chr6.102 Acer truncatum HOM05D000003 ORTHO05D000004 3.5e-08 61.6 66 43.9
TPR.G11399 Trifolium pratense HOM05D000003 ORTHO05D000004 3.5e-08 61.6 72 40.3
Atru.chr7.120 Acer truncatum HOM05D000003 ORTHO05D000004 4.5e-08 61.2 72 40.3
COL.COLO4_00878 Corchorus olitorius HOM05D000003 ORTHO05D000004 4.5e-08 61.2 73 43.8
Atru.chr4.30 Acer truncatum HOM05D000003 ORTHO05D000004 7.8e-08 60.5 82 39.0
FvH4_5g27994 Fragaria vesca HOM05D000003 ORTHO05D000004 7.8e-08 60.5 72 36.1
TPR.G23914 Trifolium pratense HOM05D000003 ORTHO05D000004 7.8e-08 60.5 67 38.8
Atru.chr4.1942 Acer truncatum HOM05D000003 ORTHO05D000004 1.0e-07 60.1 65 43.1
Atru.chr7.622 Acer truncatum HOM05D000003 ORTHO05D000004 1.0e-07 60.1 82 37.8
Atru.chr7.713 Acer truncatum HOM05D000003 ORTHO05D000004 1.0e-07 60.1 82 36.6
QL07p017571 Quercus lobata HOM05D002168 ORTHO05D002277 1.0e-07 60.1 62 45.2
Atru.chr1.3365 Acer truncatum HOM05D000003 ORTHO05D000004 1.3e-07 59.7 72 37.5
Atru.chr11.133 Acer truncatum HOM05D000003 ORTHO05D000004 1.3e-07 59.7 65 41.5
Atru.chr3.2067 Acer truncatum HOM05D000003 ORTHO05D000022 1.3e-07 59.7 82 37.8
Atru.chr5.2549 Acer truncatum HOM05D000003 ORTHO05D000004 1.3e-07 59.7 73 37.0
Atru.chr7.952 Acer truncatum HOM05D000003 ORTHO05D000004 1.3e-07 59.7 72 38.9
Nn1g02336 Nelumbo nucifera HOM05D000003 ORTHO05D000004 1.3e-07 59.7 73 37.0
Atru.chr10.890 Acer truncatum HOM05D000003 ORTHO05D000022 1.7e-07 59.3 72 37.5
Atru.chr13.1905 Acer truncatum HOM05D000003 ORTHO05D000004 1.7e-07 59.3 82 39.0
Atru.chr6.1036 Acer truncatum HOM05D000003 ORTHO05D000004 1.7e-07 59.3 72 41.7
PSO210G2790 Papaver somniferum HOM05D000003 ORTHO05D000004 1.7e-07 59.3 74 36.5
RcHm_v2.0_Chr4g0406871 Rosa chinensis HOM05D000003 ORTHO05D000004 1.7e-07 59.3 72 36.1
CSS0013913 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.3e-07 58.9 70 37.1
Potri.002G067201 Populus trichocarpa HOM05D000003 ORTHO05D000004 2.3e-07 58.9 65 43.1
Atru.chr10.81 Acer truncatum HOM05D000003 ORTHO05D000004 2.9e-07 58.5 72 38.9
Atru.chr4.1654 Acer truncatum HOM05D000003 ORTHO05D000004 2.9e-07 58.5 65 41.5
Atru.chr4.2769 Acer truncatum HOM05D000003 ORTHO05D000004 2.9e-07 58.5 65 41.5
Atru.chr9.1444 Acer truncatum HOM05D000003 ORTHO05D000004 3.9e-07 58.2 83 36.1
Cpa.g.sc791.1 Carica papaya HOM05D000003 ORTHO05D000004 3.9e-07 58.2 82 36.6
Nn1g02475 Nelumbo nucifera HOM05D000003 ORTHO05D000004 3.9e-07 58.2 74 36.5
QL09p044755 Quercus lobata HOM05D000104 ORTHO05D004363 3.9e-07 58.2 65 44.6
Atru.chr1.3207 Acer truncatum HOM05D000003 ORTHO05D000004 5.0e-07 57.8 66 37.9
Atru.chr13.2218 Acer truncatum HOM05D000003 ORTHO05D000004 5.0e-07 57.8 72 40.3
Atru.chr2.1761 Acer truncatum HOM05D000003 ORTHO05D000004 5.0e-07 57.8 72 37.5
COL.COLO4_36959 Corchorus olitorius HOM05D000003 ORTHO05D000004 5.0e-07 57.8 67 38.8
PSO017G0418 Papaver somniferum HOM05D000003 ORTHO05D000004 5.0e-07 57.8 74 37.8
PSO170G6301 Papaver somniferum HOM05D000003 ORTHO05D000004 5.0e-07 57.8 74 35.1
QL10p005473 Quercus lobata HOM05D000230 ORTHO05D000176 5.0e-07 57.8 66 42.4
QL93p0089_0059 Quercus lobata HOM05D000003 ORTHO05D000004 5.0e-07 57.8 65 43.1
QL93p0340_0006 Quercus lobata HOM05D000003 ORTHO05D000004 5.0e-07 57.8 65 43.1
TWI36G1780 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 5.0e-07 57.8 63 42.9
Atru.chr1.2517 Acer truncatum HOM05D000003 ORTHO05D000004 6.6e-07 57.4 82 37.8
Aqoxy3G01975 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 6.6e-07 57.4 70 37.1
CSS0010661 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.6e-07 57.4 66 36.4
Medtr1g054775 Medicago truncatula HOM05D000003 ORTHO05D000004 6.6e-07 57.4 65 40.0
QL05p086823 Quercus lobata HOM05D000003 ORTHO05D000004 6.6e-07 57.4 66 42.4
QL12p026404 Quercus lobata HOM05D000003 ORTHO05D000004 6.6e-07 57.4 66 42.4
Atru.chr1.1905 Acer truncatum HOM05D000003 ORTHO05D000022 8.6e-07 57.0 72 36.1
Atru.chr12.2483 Acer truncatum HOM05D000003 ORTHO05D000004 8.6e-07 57.0 82 35.4
Atru.chr2.1278 Acer truncatum HOM05D000003 ORTHO05D000004 8.6e-07 57.0 67 37.3
Atru.chr2.669 Acer truncatum HOM05D000003 ORTHO05D000004 8.6e-07 57.0 90 35.6
Atru.chr4.2034 Acer truncatum HOM05D000003 ORTHO05D000004 8.6e-07 57.0 64 39.1
Atru.chr6.1554 Acer truncatum HOM05D000003 ORTHO05D000004 8.6e-07 57.0 72 40.3
COL.COLO4_17415 Corchorus olitorius HOM05D000003 ORTHO05D000004 8.6e-07 57.0 72 36.1
QL06p010043 Quercus lobata HOM05D000003 ORTHO05D000004 8.6e-07 57.0 66 42.4
Atru.chr7.668 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-06 56.6 72 37.5
Atru.chr7.950 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-06 56.6 82 37.8
RcHm_v2.0_Chr6g0291741 Rosa chinensis HOM05D000003 ORTHO05D000004 1.1e-06 56.6 72 36.1
Atru.chr2.2564 Acer truncatum HOM05D000003 ORTHO05D000004 1.5e-06 56.2 66 34.8
Atru.chr2.282 Acer truncatum HOM05D000003 ORTHO05D000004 1.5e-06 56.2 62 41.9
Atru.chr8.1166 Acer truncatum HOM05D003047 ORTHO05D000627 1.5e-06 56.2 66 36.4
Aqoxy1G03216 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.5e-06 56.2 70 35.7
CSS0004655 Camellia sinensis var. sinensis HOM05D000164 ORTHO05D000004 1.5e-06 56.2 70 35.7
PSO063G0724 Papaver somniferum HOM05D000003 ORTHO05D000004 1.5e-06 56.2 64 39.1
QL02p091725 Quercus lobata HOM05D000399 ORTHO05D000304 1.5e-06 56.2 62 43.5
Atru.chr2.285 Acer truncatum HOM05D000003 ORTHO05D000004 1.9e-06 55.8 72 34.7
CSS0042656 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.9e-06 55.8 55 49.1
CANSAT11G1092 Cannabis sativa HOM05D000003 ORTHO05D000004 1.9e-06 55.8 72 40.3
Atru.chr10.61 Acer truncatum HOM05D000003 ORTHO05D000004 2.5e-06 55.5 65 40.0
Atru.chr2.2597 Acer truncatum HOM05D000003 ORTHO05D000004 2.5e-06 55.5 66 42.4
Atru.chr8.2073 Acer truncatum HOM05D000003 ORTHO05D000004 2.5e-06 55.5 61 41.0
Cpa.g.sc36.209 Carica papaya HOM05D000003 ORTHO05D000004 2.5e-06 55.5 72 37.5
MBI17_g22831_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.5e-06 55.5 65 40.0
QL04p060188 Quercus lobata HOM05D005440 ORTHO05D007314 2.5e-06 55.5 62 43.5
QL06p003940 Quercus lobata HOM05D002900 ORTHO05D014254 2.5e-06 55.5 77 40.3
QL06p038224 Quercus lobata HOM05D000003 ORTHO05D000004 2.5e-06 55.5 65 41.5
Atru.chr1.2620 Acer truncatum HOM05D000003 ORTHO05D000004 3.3e-06 55.1 72 40.3
EL10As4g23438 Beta vulgaris HOM05D000003 ORTHO05D000004 3.3e-06 55.1 65 38.5
CANSAT56G2138 Cannabis sativa HOM05D000003 ORTHO05D000004 3.3e-06 55.1 71 36.6
PSO384G4922 Papaver somniferum HOM05D000003 ORTHO05D000004 3.3e-06 55.1 67 41.8
QL02p073935 Quercus lobata HOM05D000003 ORTHO05D000004 3.3e-06 55.1 66 40.9
QL11p024822 Quercus lobata HOM05D000003 ORTHO05D000004 3.3e-06 55.1 66 39.4
Atru.chr13.2165 Acer truncatum HOM05D000003 ORTHO05D000004 4.3e-06 54.7 82 35.4
Atru.chr4.136 Acer truncatum HOM05D000003 ORTHO05D000022 4.3e-06 54.7 82 39.0
COL.COLO4_33843 Corchorus olitorius HOM05D000003 ORTHO05D000004 4.3e-06 54.7 59 45.8
QL05p019557 Quercus lobata HOM05D000003 ORTHO05D000004 4.3e-06 54.7 66 39.4
Atru.chr7.171 Acer truncatum HOM05D000003 ORTHO05D000004 5.6e-06 54.3 82 32.9
CSS0015726 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.6e-06 54.3 66 36.4
PSO384G4595 Papaver somniferum HOM05D000003 ORTHO05D000004 5.6e-06 54.3 84 31.0
QL06p026356 Quercus lobata HOM05D000003 ORTHO05D008360 5.6e-06 54.3 65 38.5
QL07p015194 Quercus lobata HOM05D000558 ORTHO05D006060 5.6e-06 54.3 62 41.9
QL07p019929 Quercus lobata HOM05D000003 ORTHO05D000004 5.6e-06 54.3 64 42.2
QL08p061842 Quercus lobata HOM05D000003 ORTHO05D000004 5.6e-06 54.3 66 37.9
QL10p034885 Quercus lobata HOM05D004012 ORTHO05D000004 5.6e-06 54.3 62 37.1
QL12p004433 Quercus lobata HOM05D004277 ORTHO05D005148 5.6e-06 54.3 62 41.9
Atru.chr9.657 Acer truncatum HOM05D000003 ORTHO05D000004 7.3e-06 53.9 72 36.1
CSS0026765 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.3e-06 53.9 64 35.9
Glyma.20G050651 Glycine max HOM05D000003 ORTHO05D000004 7.3e-06 53.9 64 37.5
HanXRQChr05g0151751 Helianthus annuus HOM05D000003 ORTHO05D000004 7.3e-06 53.9 69 33.3
QL02p063810 Quercus lobata HOM05D000003 ORTHO05D000004 7.3e-06 53.9 64 42.2
QL09p047247 Quercus lobata HOM05D000003 ORTHO05D001231 7.3e-06 53.9 66 40.9
Atru.chr1.3978 Acer truncatum HOM05D000003 ORTHO05D000004 9.5e-06 53.5 66 36.4
Atru.chr3.2347 Acer truncatum HOM05D000003 ORTHO05D000004 9.5e-06 53.5 65 38.5
Atru.chr3.2448 Acer truncatum HOM05D000003 ORTHO05D000004 9.5e-06 53.5 59 39.0
Atru.chr4.752 Acer truncatum HOM05D000003 ORTHO05D000004 9.5e-06 53.5 59 39.0
Atru.chr5.2238 Acer truncatum HOM05D000003 ORTHO05D000004 9.5e-06 53.5 82 34.1
Atru.chr6.413 Acer truncatum HOM05D000003 ORTHO05D002259 9.5e-06 53.5 66 39.4
Ah.06g185410 Amaranthus hybridus HOM05D000003 ORTHO05D000004 9.5e-06 53.5 63 34.9
CSS0030607 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.5e-06 53.5 55 47.3
CANSAT21G1494 Cannabis sativa HOM05D000003 ORTHO05D000004 9.5e-06 53.5 81 39.5
PSO724G1143 Papaver somniferum HOM05D000003 ORTHO05D000004 9.5e-06 53.5 77 39.0
Prupe.1G399000 Prunus persica HOM05D000003 ORTHO05D000007 9.5e-06 53.5 74 31.1
QL02p033301 Quercus lobata HOM05D000003 ORTHO05D000004 9.5e-06 53.5 62 40.3
QL05p046449 Quercus lobata HOM05D005057 ORTHO05D006570 9.5e-06 53.5 62 40.3
QL10p019482 Quercus lobata HOM05D003322 ORTHO05D000004 9.5e-06 53.5 62 40.3
TPR.G40209 Trifolium pratense HOM05D000003 ORTHO05D000004 9.5e-06 53.5 72 36.1


User provided reference genes

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