Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr08g0239111 Lupinus albus HOM05D004766 ORTHO05D006159 0.0e+00 1194.9 596 100.0
Lalb_Chr11g0067831 Lupinus albus HOM05D004766 ORTHO05D006159 2.2e-292 1008.4 596 85.2
Ca_16870_v3 Cicer arietinum L. HOM05D004766 ORTHO05D006159 4.4e-256 887.9 599 75.5
arahy.Tifrunner.gnm1.ann1.GHXG56 Arachis hypogaea HOM05D004766 ORTHO05D006159 8.8e-249 863.6 600 74.7
arahy.Tifrunner.gnm1.ann1.4BS23W Arachis hypogaea HOM05D004766 ORTHO05D006159 1.7e-247 859.4 600 74.3
Medtr3g094070 Medicago truncatula HOM05D004766 ORTHO05D006159 3.7e-247 858.2 601 74.9
TPR.G16138 Trifolium pratense HOM05D004766 ORTHO05D006159 2.4e-246 855.5 619 72.1
Psat5g069120 Pisum sativum HOM05D004766 ORTHO05D006159 7.2e-243 844.0 602 71.4
Glyma.06G143400 Glycine max HOM05D004766 ORTHO05D006159 1.6e-242 842.8 597 73.0
Glyma.04G222000 Glycine max HOM05D004766 ORTHO05D006159 3.7e-239 831.6 599 72.8
Phvul.009G142700 Phaseolus vulgaris HOM05D004766 ORTHO05D006159 1.3e-236 823.2 599 71.0
VMungo1309G2839 Vigna mungo HOM05D004766 ORTHO05D006159 9.5e-235 817.0 607 70.3
Lj1g0018162 Lotus japonicus HOM05D004766 ORTHO05D006159 3.5e-221 771.9 601 67.9
QL08p064773 Quercus lobata HOM05D004766 ORTHO05D006159 1.0e-220 770.4 608 65.6
Dinv21831 Davidia involucrata HOM05D004766 ORTHO05D006159 5.6e-219 764.6 603 65.7
Haze_17351 Corylus avellana HOM05D004766 ORTHO05D006159 1.2e-216 756.9 628 63.2
Potri.019G056200 Populus trichocarpa HOM05D004766 ORTHO05D006159 2.6e-216 755.7 602 64.6
CiPaw.01G306100 Carya illinoinensis HOM05D004766 ORTHO05D006159 9.2e-214 747.3 604 63.2
Sabra19G0071700 Salix brachista HOM05D004766 ORTHO05D006159 6.0e-213 744.6 602 64.1
Dinv26060 Davidia involucrata HOM05D004766 ORTHO05D006159 1.2e-210 736.9 603 64.0
MD07G1233000 Malus domestica HOM05D004766 ORTHO05D006159 6.2e-210 734.6 602 63.3
Ciclev10033572m.g Citrus clementina HOM05D004766 ORTHO05D006159 4.4e-208 728.4 602 63.8
Atru.chr12.159 Acer truncatum HOM05D004766 ORTHO05D006159 5.8e-208 728.0 605 63.1
Manes.07G137600 Manihot esculenta HOM05D004766 ORTHO05D006159 1.7e-207 726.5 601 63.4
FvH4_7g25850 Fragaria vesca HOM05D004766 ORTHO05D006159 8.4e-207 724.2 600 63.0
RcHm_v2.0_Chr1g0372121 Rosa chinensis HOM05D004766 ORTHO05D006159 1.1e-206 723.8 600 62.3
GSVIVG01032703001 Vitis vinifera HOM05D004766 ORTHO05D006159 1.9e-206 723.0 608 62.8
FAN06G4224 Fragaria x ananassa HOM05D004766 ORTHO05D006159 5.4e-206 721.5 600 62.7
Thecc.10G183900 Theobroma cacao HOM05D004766 ORTHO05D006159 1.6e-205 719.9 602 63.3
FAN03G3241 Fragaria x ananassa HOM05D004766 ORTHO05D006159 1.0e-204 717.2 600 62.5
Lj8C56T7 Lonicera japonica HOM05D004766 ORTHO05D006159 1.9e-203 713.0 607 62.6
TWI09G0270 Tripterygium wilfordii HOM05D004766 ORTHO05D006159 2.5e-203 712.6 604 63.9
FAN10G2197 Fragaria x ananassa HOM05D004766 ORTHO05D006159 3.3e-203 712.2 600 62.2
vmacro09973 Vaccinium macrocarpon HOM05D004766 ORTHO05D006159 5.6e-203 711.4 636 59.4
Gohir.A13G007600 Gossypium hirsutum HOM05D004766 ORTHO05D006159 7.3e-203 711.1 606 62.5
Eucgr.J00130 Eucalyptus grandis HOM05D004766 ORTHO05D006159 2.8e-202 709.1 601 61.6
CSS0019433 Camellia sinensis var. sinensis HOM05D004766 ORTHO05D006159 1.1e-201 707.2 679 57.6
Duzib128G1614 Durio zibethinus HOM05D004766 ORTHO05D006159 1.8e-201 706.4 606 62.2
Gohir.D13G007700 Gossypium hirsutum HOM05D004766 ORTHO05D006159 1.8e-201 706.4 606 62.0
Gorai.013G008100 Gossypium raimondii HOM05D004766 ORTHO05D006159 2.6e-200 702.6 606 61.7
Nn2g10346 Nelumbo nucifera HOM05D004766 ORTHO05D006159 4.4e-200 701.8 603 60.2
CANSAT56G1075 Cannabis sativa HOM05D004766 ORTHO05D006159 1.3e-199 700.3 608 61.0
Rhsim09G0184400 Rhododendron simsii HOM05D004766 ORTHO05D006159 8.4e-199 697.6 604 59.6
TAR633G2654 Trochodendron aralioides HOM05D004766 ORTHO05D006159 1.1e-198 697.2 604 60.8
PGR142G0390 Punica granatum HOM05D004766 ORTHO05D006159 4.2e-198 695.3 603 60.2
Cc02_g05520 Coffea canephora HOM05D004766 ORTHO05D006159 1.3e-196 690.3 599 59.6
PGSC0003DMG400024309 Solanum tuberosum HOM05D004766 ORTHO05D006159 1.1e-195 687.2 602 58.8
Cpa.g.sc19.83 Carica papaya HOM05D004766 ORTHO05D006159 3.3e-195 685.6 603 60.4
Nitab4.5_0003695g0010 Nicotiana tabacum HOM05D004766 ORTHO05D006159 1.6e-194 683.3 603 58.4
Oeu054426.2 Olea europaea HOM05D004766 ORTHO05D006159 1.6e-194 683.3 667 55.6
CsaV3_6G002240 Cucumis sativus L. HOM05D004766 ORTHO05D006159 2.8e-194 682.6 603 59.5
MELO3C020001.2 Cucumis melo HOM05D004766 ORTHO05D006159 8.1e-194 681.0 602 59.8
Migut.F01258 Erythranthe guttata HOM05D004766 ORTHO05D006159 4.0e-193 678.7 601 59.1
Prupe.2G263500 Prunus persica HOM05D004766 ORTHO05D006159 5.3e-193 678.3 602 60.3
Nitab4.5_0000109g0520 Nicotiana tabacum HOM05D004766 ORTHO05D006159 2.2e-191 672.9 602 58.5
Actinidia29749 Actinidia chinensis HOM05D004766 ORTHO05D006159 4.9e-191 671.8 603 58.5
Cfa001212 Carpinus fangiana HOM05D004766 ORTHO05D006159 4.9e-191 671.8 510 67.5
CAN.G169.5 Capsicum annuum HOM05D004766 ORTHO05D006159 8.4e-191 671.0 603 57.9
Nn5g26881 Nelumbo nucifera HOM05D004766 ORTHO05D006159 8.4e-191 671.0 601 58.9
MSTRG.178 Avicennia marina HOM05D004766 ORTHO05D006159 2.1e-189 666.4 601 59.1
THA.LOC104812375 Tarenaya hassleriana HOM05D004766 ORTHO05D006159 2.7e-189 666.0 602 58.8
Sed0017451 Sechium edule HOM05D004766 ORTHO05D006159 3.5e-189 665.6 601 59.4
HanXRQChr08g0222571 Helianthus annuus HOM05D004766 ORTHO05D006159 1.0e-188 664.1 601 57.4
EL10Ac2g04254 Beta vulgaris HOM05D004766 ORTHO05D006159 2.3e-188 662.9 604 58.9
HanXRQChr17g0560771 Helianthus annuus HOM05D004766 ORTHO05D006159 1.9e-187 659.8 600 55.8
Lsat_1_v5_gn_8_13521 Lactuca sativa HOM05D004766 ORTHO05D006159 4.3e-187 658.7 602 57.6
ECA233G3027 Erigeron canadensis HOM05D004766 ORTHO05D006159 1.3e-186 657.1 603 57.4
Ah.16g104280 Amaranthus hybridus HOM05D004766 ORTHO05D006159 6.2e-186 654.8 602 57.5
SalBow5G3937 Salvia bowleyana HOM05D004766 ORTHO05D006159 9.0e-185 651.0 637 54.3
DCAR_010519 Daucus carota HOM05D004766 ORTHO05D006159 2.6e-184 649.4 599 56.8
Actinidia31615 Actinidia chinensis HOM05D004766 ORTHO05D006159 4.5e-184 648.7 603 57.4
PSO384G4442 Papaver somniferum HOM05D004766 ORTHO05D006159 2.9e-183 646.0 611 56.5
SGA_v2.0_scaffold275G46605 Striga asiatica HOM05D004766 ORTHO05D006159 8.4e-183 644.4 616 56.5
PSO339G1431 Papaver somniferum HOM05D004766 ORTHO05D006159 1.4e-182 643.7 611 56.3
BcaC02g07319 Brassica carinata HOM05D004766 ORTHO05D006159 4.6e-181 638.6 604 55.8
Hund13464 Selenicereus undatus HOM05D004766 ORTHO05D006159 1.0e-180 637.5 602 57.1
ClCG11G005730 Citrullus lanatus HOM05D004766 ORTHO05D006159 2.3e-180 636.3 564 59.0
MBI15_g35105_MAGBIO Magnolia biondii HOM05D004766 ORTHO05D006159 2.3e-180 636.3 620 55.3
Thhalv10016414m.g Eutrema salsugineum HOM05D004766 ORTHO05D006159 3.9e-180 635.6 609 56.2
Aqoxy4G02363 Aquilegia oxysepala HOM05D004766 ORTHO05D006159 6.7e-180 634.8 599 55.1
BcaB06g29150 Brassica carinata HOM05D004766 ORTHO05D006159 6.7e-180 634.8 605 55.7
CARHR135660 Cardamine hirsuta HOM05D004766 ORTHO05D006159 1.5e-179 633.6 603 55.2
AL4G38400 Arabidopsis lyrata HOM05D004766 ORTHO05D006159 4.3e-179 632.1 605 56.2
Carub.0004s2277 Capsella rubella HOM05D004766 ORTHO05D006159 1.3e-178 630.6 604 55.6
AUR62031489 Chenopodium quinoa HOM05D004766 ORTHO05D006159 1.6e-178 630.2 602 57.1
AT2G40550 Arabidopsis thaliana HOM05D004766 ORTHO05D006159 1.8e-177 626.7 605 55.7
Hma1.2p1_2838F.1_g329290 Hydrangea macrophylla HOM05D004766 ORTHO05D006159 1.8e-177 626.7 539 61.0
Aa31LG10G11180 Aethionema arabicum HOM05D004766 ORTHO05D006159 2.4e-177 626.3 603 56.6
THA.LOC104803295 Tarenaya hassleriana HOM05D004766 ORTHO05D006159 6.9e-177 624.8 599 55.8
AUR62012360 Chenopodium quinoa HOM05D004766 ORTHO05D006159 1.5e-176 623.6 601 56.1
Sp4g22880 Schrenkiella parvula HOM05D004766 ORTHO05D006159 7.6e-176 621.3 607 55.2
SpUn0061_0030 Schrenkiella parvula HOM05D004766 ORTHO05D006159 7.6e-176 621.3 607 55.2
FAN01G2723 Fragaria x ananassa HOM05D004766 ORTHO05D006159 1.3e-175 620.5 559 58.7
A04p31000 Brassica napus HOM05D004766 ORTHO05D006159 6.7e-172 608.2 602 54.5
Sc10g0002920 Simmondsia chinensis HOM05D004766 ORTHO05D006159 7.4e-171 604.7 569 56.4
C04p68390 Brassica napus HOM05D004766 ORTHO05D006159 2.4e-169 599.7 602 53.5
Os01g0166800 Oryza sativa ssp. japonica HOM05D004766 ORTHO05D006159 2.2e-162 576.6 611 50.6
ATR0681G084 Amborella trichopoda HOM05D004766 ORTHO05D006159 2.9e-159 566.2 602 50.3
Actinidia33880 Actinidia chinensis HOM05D004766 ORTHO05D006159 6.5e-159 565.1 585 53.3
Zm00001eb123270 Zea mays HOM05D004766 ORTHO05D006159 5.5e-158 562.0 612 50.2
unitig_90.g27573 Utricularia gibba HOM05D004766 ORTHO05D006159 5.9e-152 542.0 628 48.7
BraA04t18557Z Brassica rapa HOM05D000154 ORTHO05D000092 5.5e-150 535.4 533 55.0
HPP92_018094 Vanilla planifolia HOM05D004766 ORTHO05D006159 7.2e-150 535.0 604 49.2
MD01G1166300 Malus domestica HOM05D004766 ORTHO05D006159 9.4e-150 534.6 447 61.7
BolC4t28340H Brassica oleracea HOM05D000154 ORTHO05D000092 3.9e-148 529.3 533 54.0
Hma1.2p1_2838F.1_g329300 Hydrangea macrophylla HOM05D004766 ORTHO05D006159 6.7e-148 528.5 421 65.3
CDE12G0671 Ceratophyllum demersum HOM05D004766 ORTHO05D006159 9.7e-147 524.6 598 48.2
SEGI_19414 Sequoiadendron giganteum HOM05D004766 ORTHO05D006159 1.0e-143 514.6 606 45.0
COL.COLO4_19454 Corchorus olitorius HOM05D004766 ORTHO05D006159 2.2e-138 496.9 473 57.3
Sopen06g015640 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-137 493.8 526 51.0
C04p02090 Brassica napus HOM05D004766 ORTHO05D006159 2.9e-135 486.5 552 49.1
SHI28878 Sapria himalayana HOM05D004766 ORTHO05D006159 1.1e-126 458.0 368 61.1
Pp3c21_8640 Physcomitrium patens HOM05D004766 ORTHO05D006159 3.2e-121 439.9 616 40.7
TAR636G0335 Trochodendron aralioides HOM05D004766 ORTHO05D006159 4.3e-110 402.9 280 71.4
AagrBONN_evm.TU.Sc2ySwM_228.256 Anthoceros agrestis HOM05D004766 ORTHO05D006159 2.6e-107 393.7 579 41.3
SMO347G0133 Selaginella moellendorffii HOM05D004766 ORTHO05D006159 1.1e-102 378.3 607 38.9
MD01G1183300 Malus domestica HOM05D004766 ORTHO05D006159 2.0e-99 367.5 339 58.7
Mapoly0030s0020 Marchantia polymorpha HOM05D004766 ORTHO05D006159 1.7e-98 364.4 620 36.5
SMO347G0333 Selaginella moellendorffii HOM05D004766 ORTHO05D006159 1.2e-93 348.2 605 37.7
Peaxi162Scf00739g00014 Petunia axillaris HOM05D004766 ORTHO05D006159 8.1e-93 345.5 249 66.7
CBR_g29836 Chara braunii HOM05D004766 ORTHO05D006159 7.1e-89 332.4 616 34.6
Dinv21784 Davidia involucrata HOM05D004766 ORTHO05D006159 3.3e-86 323.6 338 53.3
TAR636G1150 Trochodendron aralioides HOM05D004766 ORTHO05D006159 2.4e-81 307.4 312 53.5
BcaC02g12723 Brassica carinata HOM05D000154 ORTHO05D000092 2.4e-76 290.8 461 39.9
MCO09G187 Micromonas commoda HOM05D004766 ORTHO05D006159 6.9e-76 289.3 620 33.2
Solyc06g050200.2 Solanum lycopersicum HOM05D004766 ORTHO05D006159 2.7e-72 277.3 250 57.2
SalBow5G1700 Salvia bowleyana HOM05D004766 ORTHO05D006159 2.7e-64 250.8 407 41.5
CSS0047727 Camellia sinensis var. sinensis HOM05D004766 ORTHO05D006159 1.1e-52 212.2 288 44.4
BcaC02g12598 Brassica carinata HOM05D004766 ORTHO05D006159 3.1e-52 210.7 167 62.3
PRCOL_00003324 Prasinoderma coloniale HOM05D004766 ORTHO05D006159 3.6e-48 197.2 565 29.7
Peaxi162Scf00739g00019 Petunia axillaris HOM05D004766 ORTHO05D006159 6.7e-47 193.0 287 41.8
MD01G1166000 Malus domestica HOM05D004766 ORTHO05D006159 3.4e-43 180.6 154 61.0
BolC4t21721H Brassica oleracea HOM05D004766 ORTHO05D006159 3.7e-37 160.6 134 57.5
A05p01790 Brassica napus HOM05D004766 ORTHO05D006159 4.1e-36 157.1 128 62.5
BolC4t21857H Brassica oleracea HOM05D000154 ORTHO05D000092 7.0e-36 156.4 386 31.6
HanXRQChr02g0033011 Helianthus annuus HOM05D004766 ORTHO05D006159 2.9e-34 151.0 137 54.0
Solyc06g050180.3 Solanum lycopersicum HOM05D004766 ORTHO05D006159 1.0e-31 142.5 291 36.4
BraA05t19176Z Brassica rapa HOM05D004766 ORTHO05D006159 6.7e-31 139.8 116 62.1
Nn1g07504 Nelumbo nucifera HOM05D004766 ORTHO05D006159 8.0e-24 116.3 82 70.7
HanXRQChr03g0064211 Helianthus annuus HOM05D004766 ORTHO05D006159 2.3e-23 114.8 94 57.4
Cre01.g030150 Chlamydomonas reinhardtii HOM05D004766 ORTHO05D006159 3.4e-22 110.9 875 21.9
AagrBONN_evm.TU.Sc2ySwM_228.73 Anthoceros agrestis HOM05D004766 ORTHO05D006159 3.7e-21 107.5 145 39.3
MBI11_g31297_MAGBIO Magnolia biondii HOM05D004766 ORTHO05D000022 1.5e-17 95.5 75 61.3
SHI28879 Sapria himalayana HOM05D004766 ORTHO05D006159 4.2e-17 94.0 94 50.0
Peaxi162Scf00041g01211 Petunia axillaris HOM05D004766 ORTHO05D006159 1.6e-11 75.5 108 39.8
HanXRQChr15g0483741 Helianthus annuus HOM05D004766 ORTHO05D006159 3.5e-11 74.3 48 64.6
AagrBONN_evm.TU.Sc2ySwM_336.9 Anthoceros agrestis HOM05D004766 ORTHO05D006159 8.6e-10 69.7 86 40.7
BcaC04g23924 Brassica carinata HOM05D004766 ORTHO05D039973 7.2e-09 66.6 58 55.2
A06p41130 Brassica napus HOM05D000061 ORTHO05D000050 6.1e-08 63.5 58 53.4
BraA06t27036Z Brassica rapa HOM05D000061 ORTHO05D000050 3.0e-07 61.2 57 52.6
BolC1t04291H Brassica oleracea HOM05D004766 ORTHO05D008768 5.2e-07 60.5 57 52.6
COL.COLO4_19455 Corchorus olitorius HOM05D004766 ORTHO05D006159 5.2e-07 60.5 35 85.7
C07p45160 Brassica napus HOM05D004766 ORTHO05D033383 1.5e-06 58.9 78 43.6
C09p32190 Brassica napus HOM05D004766 ORTHO05D008768 1.5e-06 58.9 78 43.6


User provided reference genes

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