Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr08g0235641 Lupinus albus HOM05D007067 ORTHO05D008864 3.3e-104 381.7 193 100.0
Lj1g0007284 Lotus japonicus HOM05D007067 ORTHO05D008864 4.6e-74 281.6 193 77.2
Ca_27682_v3 Cicer arietinum L. HOM05D007067 ORTHO05D008864 7.9e-74 280.8 193 76.7
Phvul.009G186200 Phaseolus vulgaris HOM05D007067 ORTHO05D008864 5.1e-73 278.1 193 75.6
Glyma.06G195200 Glycine max HOM05D007067 ORTHO05D008864 4.3e-72 275.0 188 76.6
arahy.Tifrunner.gnm1.ann1.JMB3VF Arachis hypogaea HOM05D007067 ORTHO05D008864 2.2e-71 272.7 194 77.3
arahy.Tifrunner.gnm1.ann1.V8ZK3N Arachis hypogaea HOM05D007067 ORTHO05D008864 2.2e-71 272.7 194 77.3
Glyma.04G167400 Glycine max HOM05D007067 ORTHO05D008864 1.8e-70 269.6 188 76.1
TPR.G11876 Trifolium pratense HOM05D007067 ORTHO05D008864 9.1e-70 267.3 194 74.2
Medtr3g435320 Medicago truncatula HOM05D007067 ORTHO05D008864 4.5e-69 265.0 194 73.2
Psat5g201280 Pisum sativum HOM05D007067 ORTHO05D008864 2.7e-66 255.8 194 72.2
MD06G1195600 Malus domestica HOM05D007067 ORTHO05D008864 1.4e-62 243.4 193 65.8
MD14G1202700 Malus domestica HOM05D007067 ORTHO05D008864 2.0e-61 239.6 194 65.5
Prupe.5G195500 Prunus persica HOM05D007067 ORTHO05D008864 2.6e-61 239.2 194 66.5
Cfa018925 Carpinus fangiana HOM05D007067 ORTHO05D008864 6.5e-60 234.6 193 65.3
CiPaw.11G046200 Carya illinoinensis HOM05D007067 ORTHO05D008864 1.9e-59 233.0 187 64.2
QL10p017305 Quercus lobata HOM05D007067 ORTHO05D008864 4.2e-59 231.9 192 62.5
FAN18G1220 Fragaria x ananassa HOM05D007067 ORTHO05D008864 2.1e-58 229.6 195 64.6
RcHm_v2.0_Chr7g0181701 Rosa chinensis HOM05D007067 ORTHO05D008864 2.1e-58 229.6 195 64.6
FAN13G0188 Fragaria x ananassa HOM05D007067 ORTHO05D008864 2.7e-58 229.2 195 64.6
CSS0040643 Camellia sinensis var. sinensis HOM05D007067 ORTHO05D008864 3.6e-58 228.8 194 62.9
FAN08G0270 Fragaria x ananassa HOM05D007067 ORTHO05D008864 3.6e-58 228.8 195 64.6
Nitab4.5_0003381g0030 Nicotiana tabacum HOM05D007067 ORTHO05D008864 5.2e-57 224.9 193 61.7
Nitab4.5_0005226g0040 Nicotiana tabacum HOM05D007067 ORTHO05D008864 1.5e-56 223.4 194 61.9
ClCG06G016120 Citrullus lanatus HOM05D007067 ORTHO05D008864 2.0e-56 223.0 187 62.0
Rhsim08G0153200 Rhododendron simsii HOM05D007067 ORTHO05D008864 3.3e-56 222.2 193 62.2
TAR622G0622 Trochodendron aralioides HOM05D007067 ORTHO05D008864 3.3e-56 222.2 194 61.3
GSVIVG01004672001 Vitis vinifera HOM05D007067 ORTHO05D008864 4.4e-56 221.9 187 61.5
GSVIVG01005334001 Vitis vinifera HOM05D007067 ORTHO05D008864 4.4e-56 221.9 187 61.5
Cc04_g16320 Coffea canephora HOM05D007067 ORTHO05D008864 1.3e-55 220.3 193 61.7
MELO3C017182.2 Cucumis melo HOM05D007067 ORTHO05D008864 2.8e-55 219.2 187 63.1
Nn3g17293 Nelumbo nucifera HOM05D007067 ORTHO05D008864 4.8e-55 218.4 193 60.1
CAN.G846.12 Capsicum annuum HOM05D007067 ORTHO05D008864 1.4e-54 216.9 193 60.1
TWI60G1483 Tripterygium wilfordii HOM05D007067 ORTHO05D008864 1.4e-54 216.9 187 62.6
CsaV3_1G002440 Cucumis sativus L. HOM05D007067 ORTHO05D008864 2.4e-54 216.1 187 62.6
Actinidia04879 Actinidia chinensis HOM05D007067 ORTHO05D008864 5.3e-54 214.9 188 59.6
Manes.06G091000 Manihot esculenta HOM05D007067 ORTHO05D008864 7.7e-53 211.1 189 60.8
vmacro17532 Vaccinium macrocarpon HOM05D007067 ORTHO05D008864 1.0e-52 210.7 192 56.8
Sed0012968 Sechium edule HOM05D007067 ORTHO05D008864 1.3e-52 210.3 187 59.4
PGSC0003DMG400021933 Solanum tuberosum HOM05D007067 ORTHO05D008864 1.3e-52 210.3 189 60.8
SalBow3G2729 Salvia bowleyana HOM05D007067 ORTHO05D008864 1.7e-52 209.9 193 60.1
Hma1.2p1_0637F.1_g193620 Hydrangea macrophylla HOM05D007067 ORTHO05D008864 2.2e-52 209.5 129 77.5
Potri.012G068500 Populus trichocarpa HOM05D007067 ORTHO05D008864 5.0e-52 208.4 187 59.4
Aqoxy3G00483 Aquilegia oxysepala HOM05D007067 ORTHO05D008864 1.1e-51 207.2 193 59.6
MBI02_g12272_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 1.9e-51 206.5 189 56.6
Solyc12g036170.2 Solanum lycopersicum HOM05D007067 ORTHO05D008864 3.2e-51 205.7 127 77.2
CDE02G3919 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 5.5e-51 204.9 193 59.1
CANSAT56G4102 Cannabis sativa HOM05D007067 ORTHO05D008864 7.2e-51 204.5 187 58.3
Sopen12g016290 Solanum pennellii HOM05D007067 ORTHO05D008864 7.2e-51 204.5 127 76.4
MSTRG.9621 Avicennia marina HOM05D007067 ORTHO05D008864 9.4e-51 204.1 195 59.0
EL10Ac5g11044 Beta vulgaris HOM05D007067 ORTHO05D008864 9.4e-51 204.1 193 57.0
Duzib205G1209 Durio zibethinus HOM05D007067 ORTHO05D008864 9.4e-51 204.1 193 60.1
Eucgr.K02487 Eucalyptus grandis HOM05D007067 ORTHO05D008864 1.2e-50 203.8 136 70.6
Cpa.g.sc111.20 Carica papaya HOM05D007067 ORTHO05D008864 2.7e-50 202.6 187 55.6
DCAR_016569 Daucus carota HOM05D007067 ORTHO05D008864 2.7e-50 202.6 189 58.7
PSO063G5395 Papaver somniferum HOM05D007067 ORTHO05D008864 2.7e-50 202.6 138 71.0
HanXRQChr05g0156061 Helianthus annuus HOM05D007067 ORTHO05D008864 4.7e-50 201.8 195 60.5
Lj5A109T72 Lonicera japonica HOM05D007067 ORTHO05D008864 6.1e-50 201.4 150 66.7
Sabra12G0047100 Salix brachista HOM05D007067 ORTHO05D008864 6.1e-50 201.4 187 58.3
PSO832G0421 Papaver somniferum HOM05D007067 ORTHO05D008864 8.0e-50 201.1 187 59.9
Thecc.03G091100 Theobroma cacao HOM05D007067 ORTHO05D008864 2.3e-49 199.5 192 57.8
Atru.chr9.195 Acer truncatum HOM05D007067 ORTHO05D008864 4.0e-49 198.7 189 59.3
Peaxi162Scf00106g00326 Petunia axillaris HOM05D007067 ORTHO05D008864 8.8e-49 197.6 153 67.3
Migut.D01803 Erythranthe guttata HOM05D007067 ORTHO05D008864 1.5e-48 196.8 189 56.1
AUR62008437 Chenopodium quinoa HOM05D007067 ORTHO05D008864 2.6e-48 196.1 132 70.5
Gorai.003G097800 Gossypium raimondii HOM05D007067 ORTHO05D008864 5.7e-48 194.9 187 55.6
Dinv38731 Davidia involucrata HOM05D007067 ORTHO05D008864 9.7e-48 194.1 193 56.5
ECA246G0430 Erigeron canadensis HOM05D007067 ORTHO05D008864 9.7e-48 194.1 196 55.6
Sp1g16740 Schrenkiella parvula HOM05D007067 ORTHO05D008864 1.3e-47 193.7 188 56.4
Gohir.A03G067300 Gossypium hirsutum HOM05D007067 ORTHO05D008864 1.7e-47 193.4 186 56.5
CDE09G1053 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 2.2e-47 193.0 161 61.5
Gohir.D03G093800 Gossypium hirsutum HOM05D007067 ORTHO05D008864 2.2e-47 193.0 187 55.6
AL1G31200 Arabidopsis lyrata HOM05D007067 ORTHO05D008864 4.8e-47 191.8 188 57.4
AT1G18730 Arabidopsis thaliana HOM05D007067 ORTHO05D008864 4.1e-46 188.7 188 56.9
BcaB07g31890 Brassica carinata HOM05D007067 ORTHO05D008864 7.0e-46 188.0 191 55.0
C05p17040 Brassica napus HOM05D007067 ORTHO05D008864 1.6e-45 186.8 188 54.8
BolC5t30410H Brassica oleracea HOM05D007067 ORTHO05D008864 1.6e-45 186.8 188 54.8
A06p14840 Brassica napus HOM05D007067 ORTHO05D008864 2.0e-45 186.4 188 55.9
BraA06t24606Z Brassica rapa HOM05D007067 ORTHO05D008864 2.0e-45 186.4 188 55.9
THA.LOC104808257 Tarenaya hassleriana HOM05D007067 ORTHO05D008864 2.0e-45 186.4 192 56.8
Carub.0001s1838 Capsella rubella HOM05D007067 ORTHO05D008864 3.5e-45 185.7 188 55.9
Lsat_1_v5_gn_5_20880 Lactuca sativa HOM05D007067 ORTHO05D008864 3.5e-45 185.7 127 72.4
unitig_0.g778 Utricularia gibba HOM05D007067 ORTHO05D008864 4.5e-45 185.3 127 69.3
BcaC05g25773 Brassica carinata HOM05D007067 ORTHO05D008864 5.9e-45 184.9 188 55.9
C08p43060 Brassica napus HOM05D007067 ORTHO05D008864 5.9e-45 184.9 154 63.0
CARHR019370 Cardamine hirsuta HOM05D007067 ORTHO05D008864 1.3e-44 183.7 188 55.3
Thhalv10008902m.g Eutrema salsugineum HOM05D007067 ORTHO05D008864 2.2e-44 183.0 188 55.3
ATR0564G121 Amborella trichopoda HOM05D007067 ORTHO05D008864 6.5e-44 181.4 199 54.3
BcaB03g14481 Brassica carinata HOM05D007067 ORTHO05D008864 6.5e-44 181.4 188 54.8
PGR044G1431 Punica granatum HOM05D007067 ORTHO05D008864 6.5e-44 181.4 160 57.5
A09p59720 Brassica napus HOM05D007067 ORTHO05D008864 1.1e-43 180.6 154 60.4
BraA09t41348Z Brassica rapa HOM05D007067 ORTHO05D008864 1.1e-43 180.6 154 60.4
Eucgr.K02485 Eucalyptus grandis HOM05D007067 ORTHO05D008864 4.2e-43 178.7 123 67.5
Peaxi162Scf00106g00037 Petunia axillaris HOM05D007067 ORTHO05D008864 5.5e-43 178.3 117 76.1
BolC8t51861H Brassica oleracea HOM05D007067 ORTHO05D008864 8.0e-42 174.5 132 67.4
MBI02_g23462_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 7.5e-40 167.9 189 49.7
Aa31LG7G3520 Aethionema arabicum HOM05D007067 ORTHO05D008864 4.9e-39 165.2 117 64.1
Zm00001eb254450 Zea mays HOM05D007067 ORTHO05D008864 7.7e-37 157.9 142 56.3
COL.COLO4_28333 Corchorus olitorius HOM05D007067 ORTHO05D008864 1.5e-35 153.7 192 48.4
AUR62021654 Chenopodium quinoa HOM05D007067 ORTHO05D008864 1.9e-35 153.3 150 54.7
Os02g0744000 Oryza sativa ssp. japonica HOM05D007067 ORTHO05D008864 2.8e-34 149.4 118 62.7
BcaC07g41296 Brassica carinata HOM05D007067 ORTHO05D008864 9.8e-32 141.0 111 62.2
SEGI_39094 Sequoiadendron giganteum HOM05D007067 ORTHO05D008864 2.9e-28 129.4 158 46.2
FvH4_5g14690 Fragaria vesca HOM05D007067 ORTHO05D008864 8.6e-28 127.9 127 54.3
Rhsim08G0153500 Rhododendron simsii HOM05D007067 ORTHO05D008864 9.2e-22 107.8 186 41.4
CBR_g30507 Chara braunii HOM05D007067 ORTHO05D008864 1.6e-21 107.1 94 55.3
Ciclev10022880m.g Citrus clementina HOM05D007067 ORTHO05D008864 2.0e-21 106.7 121 45.5
Mapoly0149s0008 Marchantia polymorpha HOM05D007067 ORTHO05D008864 1.8e-17 93.6 102 45.1
Pp3c16_3930 Physcomitrium patens HOM05D007067 ORTHO05D008864 6.8e-17 91.7 94 48.9
Haze_07309 Corylus avellana HOM05D007067 ORTHO05D008864 1.7e-12 77.0 193 35.2
Ah.11g048310 Amaranthus hybridus HOM05D007067 ORTHO05D008864 1.9e-11 73.6 109 46.8
Manes.06G090801 Manihot esculenta HOM05D007067 ORTHO05D008864 2.1e-10 70.1 118 44.1
Rhsim08G0168600 Rhododendron simsii HOM05D000306 ORTHO05D023263 5.4e-06 55.5 42 71.4


User provided reference genes

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