Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr07g0189611 Lupinus albus HOM05D004069 ORTHO05D004699 3.7e-57 224.6 107 100.0
Lalb_Chr13g0291661 Lupinus albus HOM05D004069 ORTHO05D004699 1.5e-53 212.6 107 91.6
Glyma.01G145000 Glycine max HOM05D004069 ORTHO05D004699 5.2e-51 204.1 107 86.0
Glyma.03G021800 Glycine max HOM05D004069 ORTHO05D004699 6.8e-51 203.8 107 86.0
Medtr8g035900 Medicago truncatula HOM05D004069 ORTHO05D004699 6.8e-51 203.8 107 85.0
Lj3g0025312 Lotus japonicus HOM05D004069 ORTHO05D004699 8.9e-51 203.4 107 85.0
VMungo0331G0995 Vigna mungo HOM05D004069 ORTHO05D004699 1.5e-50 202.6 107 86.0
Psat4g149640 Pisum sativum HOM05D004069 ORTHO05D004699 5.8e-50 200.7 106 84.0
arahy.Tifrunner.gnm1.ann1.EYX6XU Arachis hypogaea HOM05D004069 ORTHO05D004699 7.5e-50 200.3 107 85.0
TPR.G36608 Trifolium pratense HOM05D004069 ORTHO05D004699 7.5e-50 200.3 105 84.8
VMungo0331G0279 Vigna mungo HOM05D004069 ORTHO05D004699 7.5e-50 200.3 107 84.1
arahy.Tifrunner.gnm1.ann1.J8E67M Arachis hypogaea HOM05D004069 ORTHO05D004699 1.7e-49 199.1 107 84.1
Phvul.010G048500 Phaseolus vulgaris HOM05D004069 ORTHO05D004699 2.4e-48 195.3 107 82.2
TWI73G0788 Tripterygium wilfordii HOM05D004069 ORTHO05D004699 2.3e-46 188.7 107 79.4
TWI09G1514 Tripterygium wilfordii HOM05D004069 ORTHO05D004699 3.9e-46 188.0 107 78.5
PGR004G0388 Punica granatum HOM05D004069 ORTHO05D004699 5.1e-46 187.6 107 78.5
Cpa.g.sc16.88 Carica papaya HOM05D004069 ORTHO05D004699 1.1e-45 186.4 107 79.4
QL06p006731 Quercus lobata HOM05D004069 ORTHO05D004699 7.3e-45 183.7 105 79.0
Eucgr.H03663 Eucalyptus grandis HOM05D004069 ORTHO05D004699 9.5e-45 183.3 107 76.6
GSVIVG01017834001 Vitis vinifera HOM05D004069 ORTHO05D004699 2.8e-44 181.8 107 76.6
Sabra08G0163600 Salix brachista HOM05D004069 ORTHO05D004699 8.1e-44 180.3 106 76.4
RcHm_v2.0_Chr4g0420511 Rosa chinensis HOM05D004069 ORTHO05D004699 1.1e-43 179.9 107 75.7
Manes.15G019000 Manihot esculenta HOM05D004069 ORTHO05D004699 1.4e-43 179.5 107 76.6
FAN07G2596 Fragaria x ananassa HOM05D004069 ORTHO05D004699 1.8e-43 179.1 107 74.8
FAN22G1255 Fragaria x ananassa HOM05D004069 ORTHO05D004699 1.8e-43 179.1 107 74.8
Cfa015517 Carpinus fangiana HOM05D004069 ORTHO05D004699 2.4e-43 178.7 107 73.8
Ciclev10006197m.g Citrus clementina HOM05D004069 ORTHO05D004699 2.4e-43 178.7 103 75.7
FvH4_4g16930 Fragaria vesca HOM05D004069 ORTHO05D004699 4.0e-43 177.9 107 73.8
FAN12G1790 Fragaria x ananassa HOM05D004069 ORTHO05D004699 4.0e-43 177.9 107 73.8
FAN12G4073 Fragaria x ananassa HOM05D004069 ORTHO05D004699 4.0e-43 177.9 107 73.8
FAN17G0096 Fragaria x ananassa HOM05D004069 ORTHO05D004699 4.0e-43 177.9 107 74.8
Potri.008G196600 Populus trichocarpa HOM05D004069 ORTHO05D004699 5.2e-43 177.6 106 75.5
Thhalv10015085m.g Eutrema salsugineum HOM05D004069 ORTHO05D004699 8.9e-43 176.8 107 72.9
Manes.03G189600 Manihot esculenta HOM05D004069 ORTHO05D004699 8.9e-43 176.8 107 74.8
CARHR194200 Cardamine hirsuta HOM05D004069 ORTHO05D004699 1.2e-42 176.4 107 72.9
Sp6g25590 Schrenkiella parvula HOM05D004069 ORTHO05D004699 1.2e-42 176.4 107 72.9
Atru.chr4.2722 Acer truncatum HOM05D004069 ORTHO05D004699 1.5e-42 176.0 107 74.8
BcaB01g04889 Brassica carinata HOM05D004069 ORTHO05D004699 1.5e-42 176.0 103 74.8
BcaB01g05275 Brassica carinata HOM05D004069 ORTHO05D004699 1.5e-42 176.0 107 72.9
BcaC03g13618 Brassica carinata HOM05D004069 ORTHO05D004699 1.5e-42 176.0 107 72.9
A03p09140 Brassica napus HOM05D004069 ORTHO05D004699 1.5e-42 176.0 107 72.9
A10p20810 Brassica napus HOM05D004069 ORTHO05D004699 1.5e-42 176.0 107 72.9
C03p10670 Brassica napus HOM05D004069 ORTHO05D004699 1.5e-42 176.0 107 72.9
BolC2t06916H Brassica oleracea HOM05D004069 ORTHO05D004699 1.5e-42 176.0 107 72.9
BolC3t13543H Brassica oleracea HOM05D004069 ORTHO05D004699 1.5e-42 176.0 107 72.9
BraA03t10237Z Brassica rapa HOM05D004069 ORTHO05D004699 1.5e-42 176.0 107 72.9
BraA10t44146Z Brassica rapa HOM05D004069 ORTHO05D004699 1.5e-42 176.0 107 72.9
AL6G30150 Arabidopsis lyrata HOM05D004069 ORTHO05D004699 2.0e-42 175.6 107 72.9
AT5G18800 Arabidopsis thaliana HOM05D004069 ORTHO05D004699 2.0e-42 175.6 107 72.9
BcaB08g36643 Brassica carinata HOM05D004069 ORTHO05D004699 2.0e-42 175.6 107 72.9
BraA02t05469Z Brassica rapa HOM05D004069 ORTHO05D004699 2.0e-42 175.6 107 72.0
Carub.0006s1710 Capsella rubella HOM05D004069 ORTHO05D004699 2.0e-42 175.6 107 72.9
CiPaw.02G087900 Carya illinoinensis HOM05D004069 ORTHO05D004699 2.0e-42 175.6 107 72.9
BcaC04g18646 Brassica carinata HOM05D004069 ORTHO05D004699 2.6e-42 175.3 107 72.0
BolC9t58640H Brassica oleracea HOM05D004069 ORTHO05D004699 2.6e-42 175.3 107 72.0
CiPaw.01G155300 Carya illinoinensis HOM05D004069 ORTHO05D004699 2.6e-42 175.3 107 73.8
THA.LOC104818836 Tarenaya hassleriana HOM05D004069 ORTHO05D004699 2.6e-42 175.3 107 72.0
Hma1.2p1_0078F.1_g040910 Hydrangea macrophylla HOM05D004069 ORTHO05D004699 4.4e-42 174.5 103 74.8
Nitab4.5_0001714g0140 Nicotiana tabacum HOM05D004069 ORTHO05D004699 4.4e-42 174.5 105 74.3
Nitab4.5_0009882g0010 Nicotiana tabacum HOM05D004069 ORTHO05D004699 4.4e-42 174.5 105 74.3
C09p57690 Brassica napus HOM05D004069 ORTHO05D004699 5.8e-42 174.1 107 71.0
A02p05100 Brassica napus HOM05D000415 ORTHO05D002707 7.6e-42 173.7 104 74.0
C02p10150 Brassica napus HOM05D000415 ORTHO05D002707 7.6e-42 173.7 104 74.0
Prupe.1G144300 Prunus persica HOM05D004069 ORTHO05D004699 7.6e-42 173.7 103 74.8
Potri.010G026000 Populus trichocarpa HOM05D004069 ORTHO05D004699 9.9e-42 173.3 106 72.6
Actinidia23443 Actinidia chinensis HOM05D004069 ORTHO05D004699 1.3e-41 172.9 107 70.1
CsaV3_1G037430 Cucumis sativus L. HOM05D004069 ORTHO05D004699 1.3e-41 172.9 107 71.0
Sabra10G0013600 Salix brachista HOM05D004069 ORTHO05D004699 1.3e-41 172.9 106 73.6
Hund07638 Selenicereus undatus HOM05D004069 ORTHO05D004699 1.3e-41 172.9 107 70.1
CANSAT54G0205 Cannabis sativa HOM05D004069 ORTHO05D004699 1.7e-41 172.6 107 71.0
Hma1.2p1_1671F.1_g296710 Hydrangea macrophylla HOM05D004069 ORTHO05D004699 1.7e-41 172.6 103 73.8
Aa31LG11G10890 Aethionema arabicum HOM05D004069 ORTHO05D004699 2.9e-41 171.8 107 72.0
CARHR080830 Cardamine hirsuta HOM05D004069 ORTHO05D004699 2.9e-41 171.8 106 71.7
Cc03_g02560 Coffea canephora HOM05D004069 ORTHO05D004699 3.8e-41 171.4 103 72.8
Aqoxy2G03156 Aquilegia oxysepala HOM05D004069 ORTHO05D004699 6.4e-41 170.6 106 71.7
Hund24899 Selenicereus undatus HOM05D004069 ORTHO05D004699 6.4e-41 170.6 107 72.9
Solyc08g080240.3 Solanum lycopersicum HOM05D004069 ORTHO05D004699 6.4e-41 170.6 105 71.4
Sopen08g028590 Solanum pennellii HOM05D004069 ORTHO05D004699 6.4e-41 170.6 105 71.4
AL3G17240 Arabidopsis lyrata HOM05D004069 ORTHO05D004699 8.4e-41 170.2 106 70.8
CAN.G981.42 Capsicum annuum HOM05D004069 ORTHO05D004699 8.4e-41 170.2 105 71.4
Nn4g26079 Nelumbo nucifera HOM05D004069 ORTHO05D004699 8.4e-41 170.2 103 71.8
Eucgr.B01248 Eucalyptus grandis HOM05D004069 ORTHO05D004699 1.1e-40 169.9 103 72.8
Gorai.006G256800 Gossypium raimondii HOM05D004069 ORTHO05D004699 1.4e-40 169.5 107 72.0
MD10G1048000 Malus domestica HOM05D004069 ORTHO05D004699 1.4e-40 169.5 103 71.8
Carub.0003s0574 Capsella rubella HOM05D004069 ORTHO05D004699 1.9e-40 169.1 106 69.8
Thhalv10021810m.g Eutrema salsugineum HOM05D004069 ORTHO05D004699 1.9e-40 169.1 105 71.4
Gohir.A09G232800 Gossypium hirsutum HOM05D004069 ORTHO05D004699 1.9e-40 169.1 107 71.0
Sed0000717 Sechium edule HOM05D004069 ORTHO05D004699 1.9e-40 169.1 107 70.1
AT3G06310 Arabidopsis thaliana HOM05D004069 ORTHO05D004699 2.4e-40 168.7 106 69.8
MD05G1041600 Malus domestica HOM05D004069 ORTHO05D004699 2.4e-40 168.7 103 72.8
Sc11g0003950 Simmondsia chinensis HOM05D004069 ORTHO05D004699 2.4e-40 168.7 102 74.5
PGSC0003DMG400022739 Solanum tuberosum HOM05D004069 ORTHO05D004699 2.4e-40 168.7 104 71.2
THA.LOC104827125 Tarenaya hassleriana HOM05D004069 ORTHO05D004699 2.4e-40 168.7 107 72.0
Nn3g21235 Nelumbo nucifera HOM05D004069 ORTHO05D004699 3.2e-40 168.3 103 71.8
MD13G1175600 Malus domestica HOM05D004069 ORTHO05D004699 4.1e-40 167.9 103 71.8
Actinidia40204 Actinidia chinensis HOM05D004069 ORTHO05D004699 5.4e-40 167.5 107 67.3
Eucgr.B01240 Eucalyptus grandis HOM05D004069 ORTHO05D004699 5.4e-40 167.5 103 71.8
Peaxi162Scf00620g00918 Petunia axillaris HOM05D004069 ORTHO05D004699 5.4e-40 167.5 105 70.5
Sp3g05220 Schrenkiella parvula HOM05D004069 ORTHO05D004699 5.4e-40 167.5 106 68.9
Thecc.04G274500 Theobroma cacao HOM05D004069 ORTHO05D004699 5.4e-40 167.5 107 71.0
Gohir.D09G233900 Gossypium hirsutum HOM05D004069 ORTHO05D004699 9.2e-40 166.8 107 70.1
vmacro08226 Vaccinium macrocarpon HOM05D004069 ORTHO05D004699 9.2e-40 166.8 106 68.9
CSS0012120 Camellia sinensis var. sinensis HOM05D004069 ORTHO05D004699 1.2e-39 166.4 106 69.8
Actinidia32378 Actinidia chinensis HOM05D004069 ORTHO05D004699 1.6e-39 166.0 107 67.3
Duzib151G0641 Durio zibethinus HOM05D004069 ORTHO05D004699 1.6e-39 166.0 107 69.2
Duzib212G0467 Durio zibethinus HOM05D004069 ORTHO05D004699 1.6e-39 166.0 103 70.9
Sed0022789 Sechium edule HOM05D004069 ORTHO05D004699 1.6e-39 166.0 103 70.9
PGR031G1560 Punica granatum HOM05D004069 ORTHO05D004699 2.1e-39 165.6 103 71.8
DCAR_002434 Daucus carota HOM05D004069 ORTHO05D004699 3.5e-39 164.9 103 69.9
Gohir.D10G164800 Gossypium hirsutum HOM05D004069 ORTHO05D004699 3.5e-39 164.9 107 68.2
Gorai.011G184000 Gossypium raimondii HOM05D004069 ORTHO05D004699 3.5e-39 164.9 107 68.2
MD16G1177400 Malus domestica HOM05D004069 ORTHO05D004699 3.5e-39 164.9 103 70.9
HanXRQChr13g0410171 Helianthus annuus HOM05D004069 ORTHO05D004699 7.8e-39 163.7 103 68.0
Zm00001eb396890 Zea mays HOM05D004069 ORTHO05D004699 1.0e-38 163.3 102 69.6
Actinidia00062 Actinidia chinensis HOM05D004069 ORTHO05D004699 1.3e-38 162.9 107 65.4
EL10Ac9g21174 Beta vulgaris HOM05D004069 ORTHO05D004699 1.3e-38 162.9 97 74.2
Duzib052G0156 Durio zibethinus HOM05D004069 ORTHO05D004699 1.7e-38 162.5 107 67.3
PGR031G3162 Punica granatum HOM05D004069 ORTHO05D004699 1.7e-38 162.5 103 70.9
Gohir.A10G103600 Gossypium hirsutum HOM05D004069 ORTHO05D004699 3.0e-38 161.8 107 67.3
Os03g0295500 Oryza sativa ssp. japonica HOM05D004069 ORTHO05D004699 3.0e-38 161.8 102 68.6
AUR62022250 Chenopodium quinoa HOM05D004069 ORTHO05D004699 6.6e-38 160.6 97 73.2
ECA240G0933 Erigeron canadensis HOM05D004069 ORTHO05D004699 6.6e-38 160.6 103 67.0
Oeu007709.1 Olea europaea HOM05D004069 ORTHO05D004699 6.6e-38 160.6 107 66.4
Sc19g0004820 Simmondsia chinensis HOM05D004069 ORTHO05D004699 6.6e-38 160.6 107 67.3
TAR362G0867 Trochodendron aralioides HOM05D004069 ORTHO05D004699 6.6e-38 160.6 103 68.9
Ah.01g005950 Amaranthus hybridus HOM05D004069 ORTHO05D004699 8.6e-38 160.2 97 73.2
ATR0208G034 Amborella trichopoda HOM05D004069 ORTHO05D004699 1.1e-37 159.8 103 68.9
HPP92_001127 Vanilla planifolia HOM05D004069 ORTHO05D004699 1.1e-37 159.8 102 68.6
Lsat_1_v5_gn_5_49720 Lactuca sativa HOM05D004069 ORTHO05D004699 1.5e-37 159.5 103 67.0
Zm00001eb013640 Zea mays HOM05D004069 ORTHO05D004699 2.5e-37 158.7 108 66.7
Aqoxy5G00598 Aquilegia oxysepala HOM05D004069 ORTHO05D004699 9.6e-37 156.8 105 65.7
PSO832G3814 Papaver somniferum HOM05D004069 ORTHO05D004699 1.6e-36 156.0 103 67.0
HanXRQChr03g0079731 Helianthus annuus HOM05D004069 ORTHO05D004699 2.1e-36 155.6 103 65.0
vmacro15276 Vaccinium macrocarpon HOM05D004069 ORTHO05D004699 2.1e-36 155.6 109 64.2
CDE09G1375 Ceratophyllum demersum HOM05D004069 ORTHO05D004699 2.8e-36 155.2 103 66.0
PSO210G4490 Papaver somniferum HOM05D004069 ORTHO05D004699 2.8e-36 155.2 103 66.0
Migut.F02022 Erythranthe guttata HOM05D004069 ORTHO05D004699 4.7e-36 154.5 103 68.9
unitig_46.g18583 Utricularia gibba HOM05D004069 ORTHO05D004699 1.8e-35 152.5 103 66.0
Hma1.2p1_0643F.1_g194630 Hydrangea macrophylla HOM05D004069 ORTHO05D004699 3.1e-35 151.8 97 70.1
unitig_37.g12295 Utricularia gibba HOM05D004069 ORTHO05D004699 1.2e-34 149.8 95 68.4
Rhsim02G0014600 Rhododendron simsii HOM05D004069 ORTHO05D004699 1.5e-34 149.4 108 61.1
MSTRG.9205 Avicennia marina HOM05D004069 ORTHO05D004699 2.0e-34 149.1 103 64.1
TAR633G1540 Trochodendron aralioides HOM05D004069 ORTHO05D004699 9.9e-34 146.7 85 72.9
HanXRQChr03g0080011 Helianthus annuus HOM05D004069 ORTHO05D004699 6.4e-33 144.1 85 70.6
Rhsim04G0214300 Rhododendron simsii HOM05D004069 ORTHO05D004699 1.2e-31 139.8 169 44.4
Haze_01035 Corylus avellana HOM05D004069 ORTHO05D004699 3.5e-31 138.3 87 70.1
SEGI_25177 Sequoiadendron giganteum HOM05D004069 ORTHO05D004699 3.5e-31 138.3 98 59.2
Pp3c10_17050 Physcomitrium patens HOM05D004069 ORTHO05D004699 9.6e-29 130.2 102 58.8
CBR_g31386 Chara braunii HOM05D004069 ORTHO05D004699 6.2e-28 127.5 98 58.2
Pp3c4_6220 Physcomitrium patens HOM05D004069 ORTHO05D004699 8.1e-28 127.1 100 57.0
THA.LOC104802732 Tarenaya hassleriana HOM05D004069 ORTHO05D004699 8.1e-28 127.1 80 70.0
Pp3c3_33480 Physcomitrium patens HOM05D004069 ORTHO05D004699 6.9e-27 124.0 101 54.5
CDE02G1037 Ceratophyllum demersum HOM05D003181 ORTHO05D003689 1.2e-26 123.2 82 65.9
Mapoly0119s0025 Marchantia polymorpha HOM05D004069 ORTHO05D004699 2.0e-26 122.5 93 55.9
Dinv38340 Davidia involucrata HOM05D004069 ORTHO05D004699 9.9e-26 120.2 103 54.4
Dinv44442 Davidia involucrata HOM05D004069 ORTHO05D004699 9.9e-26 120.2 106 52.8
Lsat_1_v5_gn_5_51221 Lactuca sativa HOM05D004069 ORTHO05D004699 4.9e-25 117.9 72 65.3
Ca_23836_v3 Cicer arietinum L. HOM05D004069 ORTHO05D004699 2.4e-24 115.5 63 84.1
SMO146G0136 Selaginella moellendorffii HOM05D004069 ORTHO05D004699 2.5e-21 105.5 93 43.0
CSS0016731 Camellia sinensis var. sinensis HOM05D004069 ORTHO05D004699 2.1e-20 102.4 73 63.0
ClCG03G006350 Citrullus lanatus HOM05D004069 ORTHO05D004699 3.4e-18 95.1 67 62.7
MELO3C035505.2 Cucumis melo HOM05D004069 ORTHO05D004699 7.6e-18 94.0 63 65.1
MCO10G196 Micromonas commoda HOM05D004069 ORTHO05D004699 7.6e-18 94.0 90 44.4
PGSC0003DMG400012496 Solanum tuberosum HOM05D004069 ORTHO05D004699 1.7e-17 92.8 70 61.4
VMungo0720G1128 Vigna mungo HOM05D004069 ORTHO05D004699 1.7e-17 92.8 102 51.0
Oeu055049.1 Olea europaea HOM05D005940 ORTHO05D007027 8.4e-17 90.5 69 60.9
CANSAT54G1967 Cannabis sativa HOM05D004069 ORTHO05D004699 9.3e-16 87.0 59 64.4
AUR62031965 Chenopodium quinoa HOM05D004069 ORTHO05D004699 9.3e-16 87.0 53 73.6
VMungo0251G3681 Vigna mungo HOM05D039118 ORTHO05D004699 9.3e-16 87.0 47 80.9
PRCOL_00002240 Prasinoderma coloniale HOM05D004069 ORTHO05D004699 2.7e-15 85.5 89 39.3
SGA_v2.0_scaffold122G33247 Striga asiatica HOM05D002362 ORTHO05D002465 4.6e-15 84.7 55 69.1
Lsat_1_v5_gn_5_162901 Lactuca sativa HOM05D004069 ORTHO05D004699 7.9e-15 84.0 63 61.9
Solyc08g007805.1 Solanum lycopersicum HOM05D004069 ORTHO05D004699 1.0e-14 83.6 105 45.7
HanXRQChr05g0152631 Helianthus annuus HOM05D001685 ORTHO05D007488 2.3e-14 82.4 59 62.7
Ah.01g017180 Amaranthus hybridus HOM05D004069 ORTHO05D004699 1.1e-13 80.1 44 75.0
Ah.01g017190 Amaranthus hybridus HOM05D004069 ORTHO05D004699 5.6e-13 77.8 47 72.3
MBI18_g15803_MAGBIO Magnolia biondii HOM05D004069 ORTHO05D004699 9.6e-13 77.0 40 77.5
Cfa025682 Carpinus fangiana HOM05D004069 ORTHO05D122540 1.2e-07 60.1 86 36.0


User provided reference genes

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