Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr07g0182571 Lupinus albus HOM05D006519 ORTHO05D008306 1.5e-161 572.8 281 100.0
TPR.G37507 Trifolium pratense HOM05D006519 ORTHO05D008306 7.4e-121 437.6 272 79.0
Glyma.05G033800 Glycine max HOM05D006519 ORTHO05D008306 4.8e-120 434.9 271 79.3
arahy.Tifrunner.gnm1.ann1.L198ZR Arachis hypogaea HOM05D006519 ORTHO05D008306 1.5e-118 429.9 286 77.3
Psat0s1227g0160 Pisum sativum HOM05D006519 ORTHO05D008306 1.5e-118 429.9 268 78.0
Lj4g0003537 Lotus japonicus HOM05D006519 ORTHO05D008306 5.8e-118 427.9 268 79.1
arahy.Tifrunner.gnm1.ann1.IBQC5J Arachis hypogaea HOM05D006519 ORTHO05D008306 2.2e-117 426.0 286 76.6
Medtr4g106410 Medicago truncatula HOM05D006519 ORTHO05D008306 3.8e-117 425.2 267 78.3
Ca_21889_v3 Cicer arietinum L. HOM05D006519 ORTHO05D008306 1.9e-116 422.9 272 76.5
Haze_07439 Corylus avellana HOM05D006519 ORTHO05D008306 2.5e-105 386.0 284 64.4
CiPaw.11G031700 Carya illinoinensis HOM05D006519 ORTHO05D008306 4.3e-105 385.2 277 65.3
Ciclev10021480m.g Citrus clementina HOM05D006519 ORTHO05D008306 3.7e-104 382.1 284 65.8
Prupe.5G179000 Prunus persica HOM05D006519 ORTHO05D008306 3.4e-102 375.6 283 66.4
Gorai.012G002000 Gossypium raimondii HOM05D006519 ORTHO05D008306 5.9e-102 374.8 282 66.0
MD06G1181000 Malus domestica HOM05D006519 ORTHO05D008306 1.0e-101 374.0 282 64.9
CANSAT80G0931 Cannabis sativa HOM05D006519 ORTHO05D008306 1.7e-101 373.2 271 68.3
FvH4_5g16400 Fragaria vesca HOM05D006519 ORTHO05D008306 3.8e-101 372.1 276 63.8
FAN18G3891 Fragaria x ananassa HOM05D006519 ORTHO05D008306 3.8e-101 372.1 276 63.8
Gohir.D04G001000 Gossypium hirsutum HOM05D006519 ORTHO05D008306 5.5e-100 368.2 282 64.9
FAN13G2537 Fragaria x ananassa HOM05D006519 ORTHO05D008306 4.6e-99 365.2 276 63.4
FAN08G1114 Fragaria x ananassa HOM05D006519 ORTHO05D008306 6.1e-99 364.8 273 63.0
ECA232G3316 Erigeron canadensis HOM05D006519 ORTHO05D008306 1.0e-98 364.0 279 64.5
Potri.012G076100 Populus trichocarpa HOM05D006519 ORTHO05D008306 1.0e-98 364.0 274 64.6
Duzib068G0259 Durio zibethinus HOM05D006519 ORTHO05D008306 2.3e-98 362.8 286 63.6
Actinidia34959 Actinidia chinensis HOM05D006519 ORTHO05D008306 3.9e-98 362.1 271 64.9
RcHm_v2.0_Chr7g0179701 Rosa chinensis HOM05D006519 ORTHO05D008306 5.1e-98 361.7 282 62.4
Gohir.A05G415200 Gossypium hirsutum HOM05D006519 ORTHO05D008306 8.8e-98 360.9 274 64.6
THA.LOC104809258 Tarenaya hassleriana HOM05D006519 ORTHO05D008306 2.6e-97 359.4 272 63.2
Lsat_1_v5_gn_4_73480 Lactuca sativa HOM05D006519 ORTHO05D008306 4.4e-97 358.6 276 63.0
HanXRQChr09g0271821 Helianthus annuus HOM05D006519 ORTHO05D008306 2.2e-96 356.3 281 61.2
Sc12g0005660 Simmondsia chinensis HOM05D006519 ORTHO05D008306 2.2e-96 356.3 280 62.1
TAR629G1196 Trochodendron aralioides HOM05D006519 ORTHO05D008306 2.2e-96 356.3 267 64.8
TWI81G0852 Tripterygium wilfordii HOM05D006519 ORTHO05D008306 2.8e-96 355.9 274 64.6
Sed0010209 Sechium edule HOM05D006519 ORTHO05D008306 3.7e-96 355.5 276 62.3
Nitab4.5_0003386g0010 Nicotiana tabacum HOM05D006519 ORTHO05D008306 4.8e-96 355.1 288 62.8
CSS0037543 Camellia sinensis var. sinensis HOM05D006519 ORTHO05D008306 1.1e-95 354.0 269 63.9
Nn3g17016 Nelumbo nucifera HOM05D006519 ORTHO05D008306 1.1e-95 354.0 279 62.0
Sabra12G0054300 Salix brachista HOM05D006519 ORTHO05D008306 1.4e-95 353.6 274 62.8
CSS0018091 Camellia sinensis var. sinensis HOM05D006519 ORTHO05D008306 1.8e-95 353.2 271 63.8
GSVIVG01007824001 Vitis vinifera HOM05D006519 ORTHO05D008306 2.4e-95 352.8 271 63.5
Solyc03g113860.2 Solanum lycopersicum HOM05D006519 ORTHO05D008306 6.9e-95 351.3 289 62.6
DCAR_031285 Daucus carota HOM05D006519 ORTHO05D008306 9.1e-95 350.9 279 63.4
AT5G50110 Arabidopsis thaliana HOM05D006519 ORTHO05D008306 1.2e-94 350.5 286 59.8
CsaV3_1G008220 Cucumis sativus L. HOM05D006519 ORTHO05D008306 1.5e-94 350.1 283 60.1
Sopen03g032910 Solanum pennellii HOM05D006519 ORTHO05D008306 4.5e-94 348.6 289 62.3
Oeu016332.2 Olea europaea HOM05D006519 ORTHO05D008306 7.7e-94 347.8 275 63.6
PGSC0003DMG400024585 Solanum tuberosum HOM05D006519 ORTHO05D008306 1.0e-93 347.4 293 62.8
ClCG01G014120 Citrullus lanatus HOM05D006519 ORTHO05D008306 6.5e-93 344.7 275 63.3
MELO3C002238.2 Cucumis melo HOM05D006519 ORTHO05D008306 8.5e-93 344.4 278 61.2
Carub.0008s1012 Capsella rubella HOM05D006519 ORTHO05D008306 1.4e-92 343.6 272 60.7
Migut.I00056 Erythranthe guttata HOM05D006519 ORTHO05D008306 1.4e-92 343.6 286 61.5
CAN.G853.13 Capsicum annuum HOM05D006519 ORTHO05D008306 9.4e-92 340.9 295 60.7
Thecc.03G004500 Theobroma cacao HOM05D006519 ORTHO05D008306 2.7e-91 339.3 279 60.2
Ah.11g046180 Amaranthus hybridus HOM05D006519 ORTHO05D008306 1.0e-90 337.4 268 60.4
Cc04_g13570 Coffea canephora HOM05D006519 ORTHO05D008306 1.4e-90 337.0 279 60.2
CARHR258520 Cardamine hirsuta HOM05D006519 ORTHO05D008306 1.8e-90 336.7 240 64.2
SalBow5G0752 Salvia bowleyana HOM05D006519 ORTHO05D008306 1.8e-90 336.7 313 56.5
SalBow5G4476 Salvia bowleyana HOM05D006519 ORTHO05D008306 2.3e-90 336.3 313 56.2
Sp6g11980 Schrenkiella parvula HOM05D006519 ORTHO05D008306 2.3e-90 336.3 240 64.2
MSTRG.11426 Avicennia marina HOM05D006519 ORTHO05D008306 3.0e-90 335.9 299 59.5
Phvul.003G197000 Phaseolus vulgaris HOM05D006519 ORTHO05D008306 3.0e-90 335.9 197 82.7
MBI14_g12785_MAGBIO Magnolia biondii HOM05D006519 ORTHO05D008306 5.2e-90 335.1 273 60.4
BcaB01g02918 Brassica carinata HOM05D006519 ORTHO05D008306 6.7e-90 334.7 240 64.2
A03p27660 Brassica napus HOM05D006519 ORTHO05D008306 2.8e-88 329.3 268 59.7
BraA03t11979Z Brassica rapa HOM05D006519 ORTHO05D008306 2.8e-88 329.3 268 59.7
BcaC01g04830 Brassica carinata HOM05D006519 ORTHO05D008306 6.3e-88 328.2 268 60.1
BolC3t15659H Brassica oleracea HOM05D006519 ORTHO05D008306 6.3e-88 328.2 268 60.1
PSO591G0501 Papaver somniferum HOM05D006519 ORTHO05D008306 6.3e-88 328.2 303 56.4
PGR083G2560 Punica granatum HOM05D006519 ORTHO05D008306 8.2e-88 327.8 259 62.5
Aa31sc174G50 Aethionema arabicum HOM05D006519 ORTHO05D008306 4.1e-87 325.5 250 60.8
C03p33370 Brassica napus HOM05D006519 ORTHO05D008306 4.1e-87 325.5 268 59.7
Hund02710 Selenicereus undatus HOM05D006519 ORTHO05D008306 4.1e-87 325.5 269 61.0
AUR62008282 Chenopodium quinoa HOM05D006519 ORTHO05D008306 2.6e-86 322.8 265 59.6
Atru.chr9.2404 Acer truncatum HOM05D006519 ORTHO05D008306 8.5e-85 317.8 280 59.6
Eucgr.B00339 Eucalyptus grandis HOM05D006519 ORTHO05D008306 1.2e-83 313.9 209 70.3
EL10Ac5g10829 Beta vulgaris HOM05D006519 ORTHO05D008306 2.1e-83 313.2 324 51.9
Thhalv10014373m.g Eutrema salsugineum HOM05D006519 ORTHO05D008306 4.0e-82 308.9 268 57.1
AL8G24100 Arabidopsis lyrata HOM05D006519 ORTHO05D008306 5.7e-81 305.1 209 67.0
COL.COLO4_04635 Corchorus olitorius HOM05D006519 ORTHO05D008306 5.7e-81 305.1 232 65.5
Peaxi162Scf00017g02523 Petunia axillaris HOM05D006519 ORTHO05D008306 5.7e-81 305.1 210 70.5
SGA_v2.0_scaffold467G52031 Striga asiatica HOM05D006519 ORTHO05D008306 8.2e-80 301.2 264 58.0
ATR0314G030 Amborella trichopoda HOM05D006519 ORTHO05D008306 1.8e-79 300.1 249 58.2
Rhsim12G0161700 Rhododendron simsii HOM05D006519 ORTHO05D008306 9.4e-76 287.7 269 56.5
Zm00001eb279990 Zea mays HOM05D006519 ORTHO05D008306 1.0e-74 284.3 230 59.1
unitig_62.g23572 Utricularia gibba HOM05D006519 ORTHO05D008306 2.8e-72 276.2 236 56.8
AUR62031043 Chenopodium quinoa HOM05D006519 ORTHO05D008306 6.3e-72 275.0 215 62.3
Mapoly0003s0145 Marchantia polymorpha HOM05D006519 ORTHO05D008306 1.1e-71 274.2 232 57.8
Pp3c21_11830 Physcomitrium patens HOM05D006519 ORTHO05D008306 1.9e-68 263.5 232 52.6
VMungo1215G1861 Vigna mungo HOM05D006519 ORTHO05D008306 6.8e-66 255.0 210 65.2
Lj9C454G3 Lonicera japonica HOM05D006519 ORTHO05D008306 7.5e-65 251.5 279 49.8
SMO236G0037 Selaginella moellendorffii HOM05D006519 ORTHO05D008306 1.7e-64 250.4 225 53.8
Manes.06G100700 Manihot esculenta HOM05D006519 ORTHO05D008306 7.0e-63 245.0 189 63.0
vmacro16588 Vaccinium macrocarpon HOM05D006519 ORTHO05D008306 5.9e-62 241.9 179 63.7
Hma1.2p1_0002F.1_g002810 Hydrangea macrophylla HOM05D006519 ORTHO05D008306 2.3e-61 240.0 223 55.2
MD14G1186100 Malus domestica HOM05D006519 ORTHO05D008306 6.6e-61 238.4 220 57.3
MD14G1186900 Malus domestica HOM05D006519 ORTHO05D008306 1.8e-55 220.3 172 62.8
MD13G1183500 Malus domestica HOM05D006519 ORTHO05D008306 2.8e-51 206.5 161 62.7
Hma1.2p1_0002F.1_g002800 Hydrangea macrophylla HOM05D006519 ORTHO05D008306 4.0e-50 202.6 172 58.7
AagrBONN_evm.TU.Sc2ySwM_228.2029 Anthoceros agrestis HOM05D006519 ORTHO05D008306 1.1e-47 194.5 173 57.8
Nitab4.5_0001642g0020 Nicotiana tabacum HOM05D006519 ORTHO05D008306 4.6e-46 189.1 133 69.2
MCO15G300 Micromonas commoda HOM05D006519 ORTHO05D008306 7.8e-46 188.3 239 45.2
HPP92_010835 Vanilla planifolia HOM05D006519 ORTHO05D008306 4.3e-44 182.6 160 56.2
Glyma.17G093302 Glycine max HOM05D006519 ORTHO05D008306 9.5e-44 181.4 102 84.3
Cre09.g394584 Chlamydomonas reinhardtii HOM05D006519 ORTHO05D008306 2.0e-41 173.7 305 35.4
arahy.Tifrunner.gnm1.ann1.KZGX7R Arachis hypogaea HOM05D006519 ORTHO05D008306 3.2e-39 166.4 104 80.8
arahy.Tifrunner.gnm1.ann1.J4WABN Arachis hypogaea HOM05D006519 ORTHO05D008306 1.2e-35 154.5 97 77.3
SEGI_15669 Sequoiadendron giganteum HOM05D006519 ORTHO05D008306 1.6e-35 154.1 132 57.6
Nitab4.5_0001642g0010 Nicotiana tabacum HOM05D006519 ORTHO05D008306 8.1e-35 151.8 143 57.3
Cpa.g.sc35.56 Carica papaya HOM05D006519 ORTHO05D008306 1.4e-34 151.0 100 69.0
Actinidia19081 Actinidia chinensis HOM05D006519 ORTHO05D008306 1.5e-33 147.5 140 52.1
arahy.Tifrunner.gnm1.ann1.9L22J7 Arachis hypogaea HOM05D006519 ORTHO05D014446 1.0e-29 134.8 103 67.0
HanXRQChr11g0328331 Helianthus annuus HOM05D006519 ORTHO05D008306 1.0e-29 134.8 107 57.0
C05p16930 Brassica napus HOM05D006519 ORTHO05D008306 3.9e-29 132.9 98 63.3
Os06g0239000 Oryza sativa ssp. japonica HOM05D006519 ORTHO05D008306 6.9e-26 122.1 101 57.4
CDE06G0478 Ceratophyllum demersum HOM05D006519 ORTHO05D008306 3.4e-25 119.8 84 63.1
arahy.Tifrunner.gnm1.ann1.MFZI3Y Arachis hypogaea HOM05D005365 ORTHO05D006910 1.6e-22 110.9 83 65.1
arahy.Tifrunner.gnm1.ann1.4TMU9W Arachis hypogaea HOM05D005365 ORTHO05D006910 1.9e-20 104.0 143 46.9
PRCOL_00000545 Prasinoderma coloniale HOM05D006519 ORTHO05D008306 4.3e-20 102.8 233 29.6
arahy.Tifrunner.gnm1.ann1.RNN7F2 Arachis hypogaea HOM05D006519 ORTHO05D008306 9.6e-20 101.7 86 61.6
BcaC05g25762 Brassica carinata HOM05D006519 ORTHO05D008306 1.6e-19 100.9 79 60.8
CBR_g30328 Chara braunii HOM05D000019 ORTHO05D000048 2.0e-17 94.0 99 52.5
arahy.Tifrunner.gnm1.ann1.PY279F Arachis hypogaea HOM05D006519 ORTHO05D008306 5.8e-17 92.4 67 70.1
Dinv20697 Davidia involucrata HOM05D006519 ORTHO05D008306 3.8e-16 89.7 138 42.8
SEGI_16810 Sequoiadendron giganteum HOM05D006519 ORTHO05D008306 5.1e-13 79.3 50 70.0
Potri.015G071001 Populus trichocarpa HOM05D006519 ORTHO05D008306 2.4e-10 70.5 54 61.1


User provided reference genes

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