Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr07g0179791 Lupinus albus HOM05D006119 ORTHO05D007641 1.1e-53 213.0 102 100.0
Glyma.02G202700 Glycine max HOM05D006119 ORTHO05D007641 9.7e-47 189.9 102 86.3
arahy.Tifrunner.gnm1.ann1.I28AR0 Arachis hypogaea HOM05D006119 ORTHO05D007641 2.6e-44 181.8 100 86.0
arahy.Tifrunner.gnm1.ann1.TAM15G Arachis hypogaea HOM05D006119 ORTHO05D007641 1.3e-43 179.5 100 85.0
Lj4g0015042 Lotus japonicus HOM05D006119 ORTHO05D007641 2.2e-43 178.7 100 83.0
CiPaw.15G174900 Carya illinoinensis HOM05D006119 ORTHO05D007641 1.0e-40 169.9 100 79.0
Psat0ss6646g0160 Pisum sativum HOM05D006119 ORTHO05D007641 1.0e-40 169.9 104 77.9
SGA_v2.0_scaffold206G41813 Striga asiatica HOM05D006119 ORTHO05D007641 1.0e-40 169.9 100 79.0
Phvul.003G157000 Phaseolus vulgaris HOM05D006119 ORTHO05D007641 1.4e-40 169.5 98 79.6
QL02p092825 Quercus lobata HOM05D006119 ORTHO05D007641 1.4e-40 169.5 100 78.0
PGSC0003DMG400007897 Solanum tuberosum HOM05D006119 ORTHO05D007641 1.8e-40 169.1 102 76.5
Dinv43227 Davidia involucrata HOM05D006119 ORTHO05D007641 2.3e-40 168.7 102 79.4
Haze_19227 Corylus avellana HOM05D006119 ORTHO05D007641 3.0e-40 168.3 100 78.0
Nn8g39847 Nelumbo nucifera HOM05D006119 ORTHO05D007641 3.0e-40 168.3 102 77.5
Ca_21116_v3 Cicer arietinum L. HOM05D006119 ORTHO05D007641 4.0e-40 167.9 100 79.0
Peaxi162Scf00062g00419 Petunia axillaris HOM05D006119 ORTHO05D007641 5.2e-40 167.5 102 76.5
Sopen12g005020 Solanum pennellii HOM05D006119 ORTHO05D007641 5.2e-40 167.5 102 75.5
GSVIVG01023584001 Vitis vinifera HOM05D006119 ORTHO05D007641 5.2e-40 167.5 102 74.5
Cfa020842 Carpinus fangiana HOM05D006119 ORTHO05D007641 6.7e-40 167.2 100 77.0
Dinv42873 Davidia involucrata HOM05D006119 ORTHO05D007641 6.7e-40 167.2 101 78.2
MSTRG.26287 Avicennia marina HOM05D006119 ORTHO05D007641 8.8e-40 166.8 102 77.5
Cpa.g.sc46.139 Carica papaya HOM05D006119 ORTHO05D007641 2.0e-39 165.6 102 75.5
Manes.06G037000 Manihot esculenta HOM05D006119 ORTHO05D007641 2.0e-39 165.6 100 75.0
Hma1.2p1_0028F.1_g017420 Hydrangea macrophylla HOM05D006119 ORTHO05D007641 2.6e-39 165.2 100 77.0
CARHR271810 Cardamine hirsuta HOM05D006119 ORTHO05D007641 3.3e-39 164.9 100 75.0
PGR102G3064 Punica granatum HOM05D006119 ORTHO05D007641 7.5e-39 163.7 100 74.0
AL8G34100 Arabidopsis lyrata HOM05D006119 ORTHO05D007641 9.7e-39 163.3 100 74.0
Lsat_1_v5_gn_5_91501 Lactuca sativa HOM05D006119 ORTHO05D007641 9.7e-39 163.3 100 75.0
Migut.K00337 Erythranthe guttata HOM05D006119 ORTHO05D007641 1.3e-38 162.9 100 76.0
Sed0003082 Sechium edule HOM05D006119 ORTHO05D007641 1.3e-38 162.9 100 73.0
TAR626G1228 Trochodendron aralioides HOM05D006119 ORTHO05D007641 1.3e-38 162.9 100 75.0
AT5G58005 Arabidopsis thaliana HOM05D006119 ORTHO05D007641 1.7e-38 162.5 100 74.0
Cc06_g15170 Coffea canephora HOM05D006119 ORTHO05D007641 1.7e-38 162.5 102 74.5
Solyc12g010150.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 1.7e-38 162.5 99 74.7
Thecc.09G032800 Theobroma cacao HOM05D006119 ORTHO05D007641 1.7e-38 162.5 100 73.0
CSS0002774 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 2.2e-38 162.2 100 74.0
CSS0027400 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 2.2e-38 162.2 100 74.0
Gohir.A05G052000 Gossypium hirsutum HOM05D006119 ORTHO05D007641 2.8e-38 161.8 102 71.6
Aa31LG3G13820 Aethionema arabicum HOM05D006119 ORTHO05D007641 3.7e-38 161.4 100 74.0
Gohir.D05G053500 Gossypium hirsutum HOM05D006119 ORTHO05D007641 3.7e-38 161.4 102 71.6
Oeu038007.1 Olea europaea HOM05D006119 ORTHO05D007641 3.7e-38 161.4 100 76.0
TPR.G39188 Trifolium pratense HOM05D006119 ORTHO05D007641 3.7e-38 161.4 103 75.7
Duzib187G0693 Durio zibethinus HOM05D006119 ORTHO05D007641 4.8e-38 161.0 101 70.3
Thhalv10015049m.g Eutrema salsugineum HOM05D006119 ORTHO05D007641 6.3e-38 160.6 100 74.0
Medtr4g131150 Medicago truncatula HOM05D006119 ORTHO05D007641 6.3e-38 160.6 102 75.5
TAR625G1054 Trochodendron aralioides HOM05D006119 ORTHO05D007641 6.3e-38 160.6 100 74.0
BcaB01g04471 Brassica carinata HOM05D006119 ORTHO05D007641 1.1e-37 159.8 100 73.0
Hund00673 Selenicereus undatus HOM05D006119 ORTHO05D007641 1.1e-37 159.8 98 76.5
Atru.chr7.85 Acer truncatum HOM05D006119 ORTHO05D007641 1.4e-37 159.5 100 73.0
Actinidia23551 Actinidia chinensis HOM05D006119 ORTHO05D007641 1.4e-37 159.5 100 74.0
Ciclev10009941m.g Citrus clementina HOM05D006119 ORTHO05D007641 1.4e-37 159.5 100 75.0
Sc18g0007620 Simmondsia chinensis HOM05D006119 ORTHO05D007641 1.4e-37 159.5 103 75.7
Actinidia04288 Actinidia chinensis HOM05D006119 ORTHO05D007641 1.8e-37 159.1 102 72.5
Carub.0008s1855 Capsella rubella HOM05D006119 ORTHO05D007641 1.8e-37 159.1 100 71.0
Gorai.009G055300 Gossypium raimondii HOM05D006119 ORTHO05D007641 1.8e-37 159.1 100 71.0
C03p14650 Brassica napus HOM05D006119 ORTHO05D007641 2.4e-37 158.7 100 73.0
Oeu021261.1 Olea europaea HOM05D006119 ORTHO05D007641 2.4e-37 158.7 99 74.7
TWI63G1376 Tripterygium wilfordii HOM05D006119 ORTHO05D007641 4.1e-37 157.9 102 70.6
Prupe.7G260900 Prunus persica HOM05D006119 ORTHO05D007641 5.3e-37 157.5 102 70.6
CANSAT11G0807 Cannabis sativa HOM05D006119 ORTHO05D007641 7.0e-37 157.1 102 70.6
Eucgr.C02591 Eucalyptus grandis HOM05D006119 ORTHO05D007641 7.0e-37 157.1 99 70.7
Solyc07g005410.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 9.1e-37 156.8 100 71.0
ClCG06G012280 Citrullus lanatus HOM05D006119 ORTHO05D007641 2.0e-36 155.6 100 70.0
SalBow1G1238 Salvia bowleyana HOM05D006119 ORTHO05D007641 2.0e-36 155.6 100 73.0
ECA234G1280 Erigeron canadensis HOM05D006119 ORTHO05D007641 2.7e-36 155.2 100 71.0
Eucgr.L03135 Eucalyptus grandis HOM05D006119 ORTHO05D007641 2.7e-36 155.2 97 70.1
Potri.006G186500 Populus trichocarpa HOM05D006119 ORTHO05D007641 3.5e-36 154.8 100 69.0
CAN.G1116.12 Capsicum annuum HOM05D006119 ORTHO05D007641 5.9e-36 154.1 98 72.4
Sopen07g001370 Solanum pennellii HOM05D006119 ORTHO05D007641 5.9e-36 154.1 100 70.0
RcHm_v2.0_Chr2g0085901 Rosa chinensis HOM05D006119 ORTHO05D007641 7.7e-36 153.7 102 70.6
MD15G1154500 Malus domestica HOM05D006119 ORTHO05D007641 1.0e-35 153.3 102 69.6
CsaV3_1G028790 Cucumis sativus L. HOM05D006119 ORTHO05D007641 1.3e-35 152.9 99 68.7
COL.COLO4_18789 Corchorus olitorius HOM05D006119 ORTHO05D007641 3.8e-35 151.4 100 68.0
A03p12450 Brassica napus HOM05D000882 ORTHO05D001142 6.5e-35 150.6 94 73.4
BolC3t13907H Brassica oleracea HOM05D000882 ORTHO05D001142 6.5e-35 150.6 94 73.4
BraA03t10560Z Brassica rapa HOM05D000882 ORTHO05D001142 6.5e-35 150.6 94 73.4
Potri.018G109400 Populus trichocarpa HOM05D006119 ORTHO05D007641 1.5e-34 149.4 100 67.0
unitig_899.g15448 Utricularia gibba HOM05D006119 ORTHO05D007641 1.9e-34 149.1 91 75.8
MELO3C029440.2 Cucumis melo HOM05D006119 ORTHO05D007641 2.5e-34 148.7 111 63.1
Peaxi162Scf00347g01022 Petunia axillaris HOM05D006119 ORTHO05D007641 2.5e-34 148.7 100 71.0
Sabra18G0092300 Salix brachista HOM05D006119 ORTHO05D007641 2.5e-34 148.7 100 66.0
vmacro06086 Vaccinium macrocarpon HOM05D006119 ORTHO05D007641 2.5e-34 148.7 111 64.9
MD02G1009100 Malus domestica HOM05D006119 ORTHO05D007641 4.2e-34 147.9 102 68.6
FvH4_1g01100 Fragaria vesca HOM05D006119 ORTHO05D007641 5.5e-34 147.5 100 68.0
FAN19G0026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 5.5e-34 147.5 100 68.0
PSO111G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 5.5e-34 147.5 100 65.0
FAN26G3335 Fragaria x ananassa HOM05D006119 ORTHO05D007641 9.4e-34 146.7 100 68.0
Rhsim01G0035400 Rhododendron simsii HOM05D006119 ORTHO05D007641 9.4e-34 146.7 94 72.3
RhsimUnG0039700 Rhododendron simsii HOM05D006119 ORTHO05D007641 9.4e-34 146.7 94 72.3
CDE05G1219 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 1.2e-33 146.4 100 68.0
FAN23G1211 Fragaria x ananassa HOM05D006119 ORTHO05D007641 1.6e-33 146.0 100 67.0
FAN28G1026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 2.1e-33 145.6 100 67.0
Manes.14G112500 Manihot esculenta HOM05D006119 ORTHO05D007641 3.6e-33 144.8 87 75.9
Nitab4.5_0004815g0030 Nicotiana tabacum HOM05D006119 ORTHO05D007641 4.7e-33 144.4 122 59.8
PSO561G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 8.0e-33 143.7 100 64.0
MBI15_g26716_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 1.0e-32 143.3 101 65.3
Nitab4.5_0001813g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.8e-32 142.5 88 71.6
Aqoxy7G03440 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 2.3e-32 142.1 96 68.8
Rhsim03G0256600 Rhododendron simsii HOM05D006119 ORTHO05D007641 4.0e-32 141.4 116 61.2
HPP92_017474 Vanilla planifolia HOM05D006119 ORTHO05D007641 4.0e-32 141.4 87 74.7
ATR0739G093 Amborella trichopoda HOM05D006119 ORTHO05D007641 1.5e-31 139.4 90 68.9
Nitab4.5_0002315g0130 Nicotiana tabacum HOM05D006119 ORTHO05D007641 9.8e-31 136.7 100 67.0
Nitab4.5_0001478g0060 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.7e-30 136.0 101 65.3
Zm00001eb041130 Zea mays HOM05D006119 ORTHO05D007641 2.8e-30 135.2 87 69.0
Os08g0441400 Oryza sativa ssp. japonica HOM05D006119 ORTHO05D007641 4.8e-30 134.4 87 70.1
AUR62043251 Chenopodium quinoa HOM05D006119 ORTHO05D007641 1.4e-29 132.9 94 64.9
Nitab4.5_0013449g0010 Nicotiana tabacum HOM05D006119 ORTHO05D007641 7.0e-29 130.6 96 62.5
HanXRQChr10g0314681 Helianthus annuus HOM05D006119 ORTHO05D007641 1.6e-28 129.4 100 61.0
Glyma.17G075100 Glycine max HOM05D006119 ORTHO05D007641 2.0e-28 129.0 73 83.6
Actinidia38675 Actinidia chinensis HOM05D006119 ORTHO05D007641 2.7e-28 128.6 79 72.2
EL10Ac8g18851 Beta vulgaris HOM05D006119 ORTHO05D007641 1.3e-27 126.3 92 63.0
DCAR_020878 Daucus carota HOM05D006119 ORTHO05D007641 1.3e-27 126.3 72 79.2
Nitab4.5_0006408g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 2.5e-26 122.1 74 71.6
Sp6g19680 Schrenkiella parvula HOM05D006119 ORTHO05D007641 5.5e-26 120.9 75 72.0
PGSC0003DMG400011173 Solanum tuberosum HOM05D006119 ORTHO05D007641 7.2e-26 120.6 74 71.6
Sed0018834 Sechium edule HOM05D006119 ORTHO05D007641 6.1e-25 117.5 73 69.9
CAN.G551.35 Capsicum annuum HOM05D006119 ORTHO05D007641 1.0e-24 116.7 75 70.7
Pp3c18_18500 Physcomitrium patens HOM05D006119 ORTHO05D007641 4.4e-23 111.3 101 55.4
Mapoly0012s0137 Marchantia polymorpha HOM05D006119 ORTHO05D007641 4.9e-22 107.8 90 56.7
Pp3c21_10430 Physcomitrium patens HOM05D006119 ORTHO05D007641 5.9e-20 100.9 96 51.0
SMO137G0238 Selaginella moellendorffii HOM05D006119 ORTHO05D007641 5.0e-19 97.8 93 52.7
SEGI_38164 Sequoiadendron giganteum HOM05D006119 ORTHO05D007641 6.6e-19 97.4 66 62.1
Aqoxy4G01852 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 1.6e-17 92.8 58 69.0
AagrBONN_evm.TU.Sc2ySwM_228.1886 Anthoceros agrestis HOM05D006119 ORTHO05D007641 5.2e-16 87.8 71 53.5
CDE05G1090 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 1.5e-15 86.3 66 62.1
BcaNung07255 Brassica carinata HOM05D000882 ORTHO05D001142 1.8e-13 79.3 48 68.8
Nitab4.5_0003612g0050 Nicotiana tabacum HOM05D006119 ORTHO05D007641 3.2e-13 78.6 65 56.9
PSO339G5888 Papaver somniferum HOM05D006119 ORTHO05D007641 4.7e-09 64.7 85 41.2
Pp3c22_3250 Physcomitrium patens HOM05D006119 ORTHO05D007641 3.1e-08 62.0 66 45.5
Rhsim04G0128900 Rhododendron simsii HOM05D002149 ORTHO05D002154 5.2e-08 61.2 33 81.8
MBI15_g07754_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 1.5e-07 59.7 65 46.2


User provided reference genes

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