Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr06g0166981 Lupinus albus HOM05D012173 ORTHO05D004310 4.3e-126 454.9 271 100.0
Lalb_Chr02g0146911 Lupinus albus HOM05D012173 ORTHO05D004310 2.7e-64 249.6 243 61.7
Medtr1g086670 Medicago truncatula HOM05D012173 ORTHO05D004310 8.9e-47 191.4 242 56.2
Glyma.02G010700 Glycine max HOM05D012173 ORTHO05D004310 3.4e-46 189.5 241 60.2
Glyma.10G011100 Glycine max HOM05D012173 ORTHO05D004310 2.5e-41 173.3 240 56.2
VMungo0720G2010 Vigna mungo HOM05D012173 ORTHO05D004310 4.7e-40 169.1 239 52.3
Psat6g160360 Pisum sativum HOM05D012173 ORTHO05D004310 3.2e-36 156.4 236 48.7
Lj5g0021212 Lotus japonicus HOM05D012173 ORTHO05D004310 1.9e-33 147.1 243 55.6
Ca_10269_v3 Cicer arietinum L. HOM05D012173 ORTHO05D004310 2.2e-29 133.7 248 52.4
TPR.G31752 Trifolium pratense HOM05D012173 ORTHO05D004310 3.7e-29 132.9 237 52.3
Phvul.007G212700 Phaseolus vulgaris HOM05D012173 ORTHO05D004310 7.1e-28 128.6 243 50.6
QL12p018988 Quercus lobata HOM05D009154 ORTHO05D004310 4.3e-25 119.4 239 43.9
Manes.05G013000 Manihot esculenta HOM05D009154 ORTHO05D004310 1.2e-19 101.3 246 38.2
arahy.Tifrunner.gnm1.ann1.DQ3PTC Arachis hypogaea HOM05D012173 ORTHO05D004310 2.7e-19 100.1 246 32.9
arahy.Tifrunner.gnm1.ann1.WF3AWK Arachis hypogaea HOM05D012173 ORTHO05D004310 2.7e-19 100.1 229 37.1
Prupe.3G008100 Prunus persica HOM05D018099 ORTHO05D020712 7.3e-17 92.0 223 39.5
MELO3C015909.2 Cucumis melo HOM05D009154 ORTHO05D004310 4.7e-16 89.4 240 37.1
Sed0022617 Sechium edule HOM05D009154 ORTHO05D004310 5.3e-15 85.9 240 38.8
arahy.Tifrunner.gnm1.ann1.RVTS57 Arachis hypogaea HOM05D012173 ORTHO05D004310 1.7e-13 80.9 90 53.3
Duzib211G0633 Durio zibethinus HOM05D009814 ORTHO05D004310 2.2e-13 80.5 229 40.2
ClCG09G004940 Citrullus lanatus HOM05D009154 ORTHO05D004310 8.4e-13 78.6 241 33.6
TAR362G0031 Trochodendron aralioides HOM05D007634 ORTHO05D004310 1.1e-12 78.2 238 40.3
CsaV3_7G030120 Cucumis sativus L. HOM05D009154 ORTHO05D004310 1.4e-12 77.8 240 41.2
Sed0019931 Sechium edule HOM05D009154 ORTHO05D004310 2.4e-12 77.0 253 33.2
Lj1C14T15 Lonicera japonica HOM05D009154 ORTHO05D004310 1.2e-11 74.7 225 32.0
TWI18G0583 Tripterygium wilfordii HOM05D009814 ORTHO05D004310 2.7e-11 73.6 246 41.5
Eucgr.K03556 Eucalyptus grandis HOM05D009154 ORTHO05D004310 3.5e-11 73.2 232 41.4
TAR365G0785 Trochodendron aralioides HOM05D007634 ORTHO05D004310 3.5e-11 73.2 230 39.1
Dinv10123 Davidia involucrata HOM05D009814 ORTHO05D004310 4.6e-11 72.8 244 39.3
Gohir.A08G120000 Gossypium hirsutum HOM05D009814 ORTHO05D004310 6.0e-11 72.4 229 42.8
PGR044G0657 Punica granatum HOM05D009154 ORTHO05D004310 6.0e-11 72.4 232 32.8
TAR636G1196 Trochodendron aralioides HOM05D007634 ORTHO05D004310 6.0e-11 72.4 102 45.1
Sabra14G0087500 Salix brachista HOM05D009154 ORTHO05D004310 1.7e-10 70.9 281 29.9
Duzib138G1730 Durio zibethinus HOM05D009814 ORTHO05D004310 5.1e-10 69.3 229 39.7
Cpa.g.sc18.87 Carica papaya HOM05D009814 ORTHO05D004310 1.5e-09 67.8 250 38.8
Gorai.004G145000 Gossypium raimondii HOM05D009814 ORTHO05D004310 1.9e-09 67.4 229 40.2
MD09G1285700 Malus domestica HOM05D018099 ORTHO05D020712 3.3e-09 66.6 221 41.2
Sed0013714 Sechium edule HOM05D009154 ORTHO05D004310 4.3e-09 66.2 194 33.0
MELO3C012929.2 Cucumis melo HOM05D009154 ORTHO05D004310 5.6e-09 65.9 249 30.5
COL.COLO4_23198 Corchorus olitorius HOM05D009814 ORTHO05D004310 9.6e-09 65.1 234 38.5
Thecc.01G317400 Theobroma cacao HOM05D009814 ORTHO05D004310 9.6e-09 65.1 238 39.5
AUR62011764 Chenopodium quinoa HOM05D009154 ORTHO05D004310 1.3e-08 64.7 222 30.2
Aqoxy5G02697 Aquilegia oxysepala HOM05D009154 ORTHO05D004310 2.1e-08 63.9 233 29.2
CsaV3_3G026560 Cucumis sativus L. HOM05D009154 ORTHO05D004310 2.1e-08 63.9 249 30.5
Gohir.D08G141000 Gossypium hirsutum HOM05D009814 ORTHO05D004310 2.8e-08 63.5 229 39.7
Hund16457 Selenicereus undatus HOM05D009154 ORTHO05D004310 3.6e-08 63.2 218 31.2
ClCG10G011600 Citrullus lanatus HOM05D009154 ORTHO05D004310 4.8e-08 62.8 241 29.9
GSVIVG01031256001 Vitis vinifera HOM05D007634 ORTHO05D004310 6.2e-08 62.4 253 40.7
HanXRQChr04g0108411 Helianthus annuus HOM05D009154 ORTHO05D004310 8.1e-08 62.0 221 27.6
AUR62024610 Chenopodium quinoa HOM05D009154 ORTHO05D004310 4.0e-07 59.7 227 29.5
Cc02_g35210 Coffea canephora HOM05D015885 ORTHO05D012930 4.0e-07 59.7 196 41.8
TWI36G1520 Tripterygium wilfordii HOM05D009814 ORTHO05D004310 5.3e-07 59.3 245 38.0
Nn3g21763 Nelumbo nucifera HOM05D007634 ORTHO05D004310 2.0e-06 57.4 88 44.3
Ciclev10021807m.g Citrus clementina HOM05D009814 ORTHO05D004310 2.6e-06 57.0 235 35.7
ECA236G0385 Erigeron canadensis HOM05D009154 ORTHO05D004310 2.6e-06 57.0 229 28.4
Sed0003021 Sechium edule HOM05D009154 ORTHO05D004310 4.5e-06 56.2 247 32.0
CSS0041924 Camellia sinensis var. sinensis HOM05D015885 ORTHO05D012930 5.8e-06 55.8 197 42.6
MBI19_g03266_MAGBIO Magnolia biondii HOM05D003564 ORTHO05D005332 9.9e-06 55.1 227 40.1
GSVIVG01034962001 Vitis vinifera HOM05D007634 ORTHO05D004310 9.9e-06 55.1 225 40.9


User provided reference genes

Program Settings