Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr06g0165621 Lupinus albus HOM05D004323 ORTHO05D005140 4.2e-157 558.1 319 100.0
Lalb_Chr02g0145481 Lupinus albus HOM05D004323 ORTHO05D005140 2.6e-122 442.6 285 81.4
Glyma.20G125700 Glycine max HOM05D004323 ORTHO05D005140 1.6e-119 433.3 282 80.1
Glyma.10G264800 Glycine max HOM05D004323 ORTHO05D005140 7.8e-119 431.0 282 80.1
Lj5g0009857 Lotus japonicus HOM05D004323 ORTHO05D005140 7.3e-117 424.5 282 76.6
Lj5g0025367 Lotus japonicus HOM05D004323 ORTHO05D005140 4.8e-116 421.8 282 76.6
arahy.Tifrunner.gnm1.ann1.JPDL6B Arachis hypogaea HOM05D004323 ORTHO05D005140 2.4e-115 419.5 323 78.0
arahy.Tifrunner.gnm1.ann1.B1S40C Arachis hypogaea HOM05D004323 ORTHO05D005140 4.0e-115 418.7 286 76.6
Ca_17253_v3 Cicer arietinum L. HOM05D004323 ORTHO05D005140 2.9e-113 412.5 321 76.9
Psat7g004960 Pisum sativum HOM05D004323 ORTHO05D005140 3.5e-111 405.6 284 75.4
VMungo0720G0280 Vigna mungo HOM05D004323 ORTHO05D005140 3.5e-111 405.6 281 74.4
Psat7g006200 Pisum sativum HOM05D004323 ORTHO05D005140 8.7e-110 401.0 279 74.9
Medtr8g105830 Medicago truncatula HOM05D004323 ORTHO05D005140 5.8e-106 388.3 290 72.1
Phvul.007G037100 Phaseolus vulgaris HOM05D004323 ORTHO05D005140 1.3e-105 387.1 282 72.3
Haze_11028 Corylus avellana HOM05D004323 ORTHO05D005140 5.5e-96 355.1 289 66.8
Cfa008584 Carpinus fangiana HOM05D004323 ORTHO05D005140 2.3e-94 349.7 289 66.1
CiPaw.05G248000 Carya illinoinensis HOM05D004323 ORTHO05D005140 9.0e-91 337.8 286 64.3
QL01p002128 Quercus lobata HOM05D004323 ORTHO05D005140 6.5e-89 331.6 331 65.6
Sed0006370 Sechium edule HOM05D004323 ORTHO05D005140 8.4e-89 331.3 297 62.0
Prupe.1G322700 Prunus persica HOM05D004323 ORTHO05D005140 1.9e-88 330.1 286 64.0
Potri.008G127900 Populus trichocarpa HOM05D004323 ORTHO05D005140 5.5e-88 328.6 285 62.1
Potri.010G114900 Populus trichocarpa HOM05D004323 ORTHO05D005140 3.5e-87 325.9 287 62.0
FAN07G1710 Fragaria x ananassa HOM05D004323 ORTHO05D005140 7.9e-87 324.7 288 63.9
Ciclev10015960m.g Citrus clementina HOM05D004323 ORTHO05D005140 1.0e-86 324.3 320 64.7
MD13G1027200 Malus domestica HOM05D004323 ORTHO05D005140 2.3e-86 323.2 290 60.7
FvH4_4g32210 Fragaria vesca HOM05D004323 ORTHO05D005140 8.7e-86 321.2 288 62.8
FAN12G1900 Fragaria x ananassa HOM05D004323 ORTHO05D005140 8.7e-86 321.2 288 62.8
CANSAT01G2279 Cannabis sativa HOM05D004323 ORTHO05D005140 4.3e-85 318.9 300 63.3
FAN22G0457 Fragaria x ananassa HOM05D004323 ORTHO05D005140 7.4e-85 318.2 288 63.2
Manes.15G126000 Manihot esculenta HOM05D004323 ORTHO05D005140 9.7e-85 317.8 325 66.5
RcHm_v2.0_Chr4g0440951 Rosa chinensis HOM05D004323 ORTHO05D005140 9.7e-85 317.8 288 62.8
CsaV3_5G010330 Cucumis sativus L. HOM05D004323 ORTHO05D005140 1.3e-84 317.4 303 59.4
FAN17G1549 Fragaria x ananassa HOM05D004323 ORTHO05D005140 3.7e-84 315.8 288 62.5
MD16G1030300 Malus domestica HOM05D004323 ORTHO05D005140 6.3e-84 315.1 286 59.8
Sabra10G0085000 Salix brachista HOM05D004323 ORTHO05D005140 6.9e-83 311.6 287 61.3
Eucgr.C01716 Eucalyptus grandis HOM05D004323 ORTHO05D005140 2.0e-82 310.1 288 60.8
Atru.chr11.379 Acer truncatum HOM05D004323 ORTHO05D005140 1.4e-80 303.9 283 61.1
TWI79G0055 Tripterygium wilfordii HOM05D004323 ORTHO05D005140 2.5e-80 303.1 281 59.4
Sabra08G0096600 Salix brachista HOM05D004323 ORTHO05D005140 2.7e-79 299.7 267 60.7
ClCG07G004410 Citrullus lanatus HOM05D004323 ORTHO05D005140 4.6e-79 298.9 299 57.2
TAR622G1143 Trochodendron aralioides HOM05D004323 ORTHO05D005140 1.4e-78 297.4 285 57.9
TAR629G2255 Trochodendron aralioides HOM05D004323 ORTHO05D005140 3.9e-78 295.8 284 58.1
Cpa.g.sc65.119 Carica papaya HOM05D004323 ORTHO05D005140 7.4e-77 291.6 326 61.7
GSVIVG01030895001 Vitis vinifera HOM05D004323 ORTHO05D005140 1.7e-73 280.4 291 56.7
Nn4g24090 Nelumbo nucifera HOM05D004323 ORTHO05D005140 9.7e-69 264.6 282 55.3
Dinv19000 Davidia involucrata HOM05D004323 ORTHO05D005140 4.8e-68 262.3 283 56.5
AT1G71080 Arabidopsis thaliana HOM05D004323 ORTHO05D005140 1.1e-67 261.2 289 53.3
Aa31LG4G9980 Aethionema arabicum HOM05D004323 ORTHO05D005140 4.1e-67 259.2 287 53.7
BraA07t31307Z Brassica rapa HOM05D004323 ORTHO05D005140 2.0e-66 256.9 283 53.7
BolC6t39576H Brassica oleracea HOM05D004323 ORTHO05D005140 2.6e-66 256.5 294 52.4
C06p45200 Brassica napus HOM05D004323 ORTHO05D005140 4.5e-66 255.8 293 51.9
Carub.0002s1789 Capsella rubella HOM05D004323 ORTHO05D005140 7.7e-66 255.0 288 54.2
A07p37500 Brassica napus HOM05D004323 ORTHO05D005140 1.0e-65 254.6 283 53.7
Dinv14868 Davidia involucrata HOM05D004323 ORTHO05D005140 2.2e-65 253.4 278 54.7
CSS0029895 Camellia sinensis var. sinensis HOM05D004323 ORTHO05D005140 5.0e-65 252.3 283 53.4
CDE09G0723 Ceratophyllum demersum HOM05D004323 ORTHO05D005140 8.5e-65 251.5 289 53.6
Thhalv10018840m.g Eutrema salsugineum HOM05D004323 ORTHO05D005140 1.5e-64 250.8 296 50.7
AL2G30660 Arabidopsis lyrata HOM05D004323 ORTHO05D005140 4.2e-64 249.2 288 52.1
Haze_14209 Corylus avellana HOM05D004323 ORTHO05D007831 4.2e-64 249.2 304 49.7
vmacro05495 Vaccinium macrocarpon HOM05D004323 ORTHO05D005140 4.2e-64 249.2 288 52.8
Cfa007861 Carpinus fangiana HOM05D004323 ORTHO05D007831 5.5e-64 248.8 278 53.2
Cc07_g08280 Coffea canephora HOM05D004323 ORTHO05D005140 7.2e-64 248.4 297 50.8
Sp5g26250 Schrenkiella parvula HOM05D004323 ORTHO05D005140 1.6e-63 247.3 281 53.0
BcaB03g14869 Brassica carinata HOM05D004323 ORTHO05D005140 2.7e-63 246.5 293 51.2
CARHR064370 Cardamine hirsuta HOM05D004323 ORTHO05D005140 2.7e-63 246.5 287 51.6
HPP92_006392 Vanilla planifolia HOM05D004323 ORTHO05D005140 4.7e-63 245.7 285 51.6
BcaC08g46546 Brassica carinata HOM05D004323 ORTHO05D005140 8.0e-63 245.0 285 52.3
Thecc.04G123700 Theobroma cacao HOM05D004323 ORTHO05D005140 1.0e-62 244.6 295 51.5
Duzib133G0462 Durio zibethinus HOM05D004323 ORTHO05D005140 2.3e-62 243.4 289 51.9
Rhsim10G0078500 Rhododendron simsii HOM05D004323 ORTHO05D005140 3.0e-62 243.0 302 52.3
DCAR_010732 Daucus carota HOM05D004323 ORTHO05D005140 4.0e-62 242.7 296 51.0
Lj2C436T13 Lonicera japonica HOM05D004323 ORTHO05D005140 8.8e-62 241.5 321 48.9
TWI75G0714 Tripterygium wilfordii HOM05D004323 ORTHO05D005140 8.8e-62 241.5 241 56.8
Sc14g0004810 Simmondsia chinensis HOM05D004323 ORTHO05D005140 1.1e-61 241.1 307 51.5
Ciclev10012163m.g Citrus clementina HOM05D004323 ORTHO05D005140 2.6e-61 240.0 292 51.0
Hma1.2p1_0500F.1_g166900 Hydrangea macrophylla HOM05D004323 ORTHO05D005140 5.7e-61 238.8 325 47.4
Hma1.2p1_1820F.1_g304196 Hydrangea macrophylla HOM05D004323 ORTHO05D005140 5.7e-61 238.8 325 47.4
THA.LOC104810161 Tarenaya hassleriana HOM05D004323 ORTHO05D005140 5.7e-61 238.8 258 53.9
COL.COLO4_27122 Corchorus olitorius HOM05D004323 ORTHO05D005140 7.5e-61 238.4 294 50.7
Manes.02G073900 Manihot esculenta HOM05D004323 ORTHO05D005140 7.5e-61 238.4 289 50.5
ECA246G3962 Erigeron canadensis HOM05D004323 ORTHO05D005140 2.2e-60 236.9 300 49.0
Zm00001eb217130 Zea mays HOM05D004323 ORTHO05D005140 4.8e-60 235.7 285 49.5
CAN.G625.75 Capsicum annuum HOM05D004323 ORTHO05D005140 6.3e-60 235.3 287 49.8
Cpa.g.sc116.11 Carica papaya HOM05D004323 ORTHO05D005140 6.3e-60 235.3 288 53.1
Os01g0507500 Oryza sativa ssp. japonica HOM05D004323 ORTHO05D005140 1.4e-59 234.2 285 50.9
PGR119G1370 Punica granatum HOM05D004323 ORTHO05D005140 7.0e-59 231.9 291 49.5
MBI16_g32956_MAGBIO Magnolia biondii HOM05D004323 ORTHO05D005140 9.1e-59 231.5 246 55.7
Gohir.D11G173500 Gossypium hirsutum HOM05D004323 ORTHO05D005140 1.2e-58 231.1 286 50.0
Gorai.007G185800 Gossypium raimondii HOM05D004323 ORTHO05D005140 7.7e-58 228.4 286 49.7
CiPaw.03G067400 Carya illinoinensis HOM05D004323 ORTHO05D005140 1.0e-57 228.0 283 49.8
Potri.004G092200 Populus trichocarpa HOM05D004323 ORTHO05D005140 1.7e-57 227.3 284 47.9
Zm00001eb053510 Zea mays HOM05D004323 ORTHO05D005140 2.9e-57 226.5 277 49.5
Hund14974 Selenicereus undatus HOM05D004323 ORTHO05D005140 3.8e-57 226.1 305 47.9
Gohir.A11G167200 Gossypium hirsutum HOM05D004323 ORTHO05D005140 8.5e-57 224.9 286 49.0
Eucgr.F02814 Eucalyptus grandis HOM05D004323 ORTHO05D005140 1.5e-56 224.2 298 49.7
HanXRQChr12g0375961 Helianthus annuus HOM05D004323 ORTHO05D005140 1.9e-56 223.8 292 46.9
PSO782G4339 Papaver somniferum HOM05D004323 ORTHO05D005140 1.9e-56 223.8 293 48.8
PSO063G1150 Papaver somniferum HOM05D004323 ORTHO05D005140 3.2e-56 223.0 303 48.5
TWI53G1939 Tripterygium wilfordii HOM05D004323 ORTHO05D005140 4.2e-56 222.6 290 48.3
ATR0326G041 Amborella trichopoda HOM05D004323 ORTHO05D005140 5.5e-56 222.2 283 47.7
Nitab4.5_0003598g0060 Nicotiana tabacum HOM05D004323 ORTHO05D005140 7.2e-56 221.9 307 46.9
Atru.chr1.1769 Acer truncatum HOM05D004323 ORTHO05D005140 9.4e-56 221.5 294 46.3
Aqoxy3G03961 Aquilegia oxysepala HOM05D004323 ORTHO05D005140 1.2e-55 221.1 279 48.4
Solyc02g091270.3 Solanum lycopersicum HOM05D004323 ORTHO05D005140 1.2e-55 221.1 296 48.3
Dinv33986 Davidia involucrata HOM05D004323 ORTHO05D005140 2.1e-55 220.3 215 56.7
Migut.L00479 Erythranthe guttata HOM05D004323 ORTHO05D005140 3.6e-55 219.5 297 48.5
CDE08G1420 Ceratophyllum demersum HOM05D004323 ORTHO05D005140 1.0e-54 218.0 260 53.8
PGR004G1785 Punica granatum HOM05D004323 ORTHO05D005140 5.2e-54 215.7 273 50.2
Sabra04G0062000 Salix brachista HOM05D004323 ORTHO05D005140 6.8e-54 215.3 331 42.0
Nitab4.5_0002456g0110 Nicotiana tabacum HOM05D004323 ORTHO05D005140 8.8e-54 214.9 278 48.2
Prupe.3G151600 Prunus persica HOM05D004323 ORTHO05D005140 8.8e-54 214.9 295 49.8
Ah.02g115750 Amaranthus hybridus HOM05D004323 ORTHO05D005140 1.2e-53 214.5 300 48.7
SHI04771 Sapria himalayana HOM05D004323 ORTHO05D005140 7.5e-53 211.8 270 48.9
PGSC0003DMG400030599 Solanum tuberosum HOM05D004323 ORTHO05D005140 1.7e-52 210.7 296 47.0
SalBow7G2861 Salvia bowleyana HOM05D004323 ORTHO05D005140 2.8e-52 209.9 273 47.6
unitig_748.g8745 Utricularia gibba HOM05D004323 ORTHO05D005140 2.8e-52 209.9 306 44.8
EL10Ac5g11852 Beta vulgaris HOM05D004323 ORTHO05D005140 6.3e-52 208.8 307 46.3
Peaxi162Scf00803g00424 Petunia axillaris HOM05D004323 ORTHO05D005140 8.3e-52 208.4 268 49.3
Sopen02g035890 Solanum pennellii HOM05D004323 ORTHO05D005140 1.4e-51 207.6 290 46.6
SGA_v2.0_scaffold174G39287 Striga asiatica HOM05D004323 ORTHO05D005140 1.2e-50 204.5 291 45.0
Nn3g18066 Nelumbo nucifera HOM05D004323 ORTHO05D005140 1.2e-47 194.5 166 61.4
MD09G1260000 Malus domestica HOM05D004323 ORTHO05D005140 5.2e-46 189.1 285 45.3
THA.LOC104805595 Tarenaya hassleriana HOM05D004323 ORTHO05D005140 1.5e-45 187.6 298 44.0
Gohir.A07G076100 Gossypium hirsutum HOM05D004323 ORTHO05D005140 2.2e-44 183.7 239 47.7
Oeu041976.1 Olea europaea HOM05D004323 ORTHO05D005140 4.9e-44 182.6 164 59.1
Gorai.001G085700 Gossypium raimondii HOM05D004323 ORTHO05D005140 1.1e-43 181.4 216 50.9
SalBow1G3118 Salvia bowleyana HOM05D004323 ORTHO05D005140 4.1e-43 179.5 202 49.0
Actinidia17651 Actinidia chinensis HOM05D004323 ORTHO05D005140 5.4e-43 179.1 284 42.3
Oeu030805.1 Olea europaea HOM05D004323 ORTHO05D005140 1.6e-42 177.6 289 42.9
Gohir.D07G080600 Gossypium hirsutum HOM05D004323 ORTHO05D005140 1.3e-41 174.5 216 49.5
Sp7g04050 Schrenkiella parvula HOM05D004323 ORTHO05D005140 1.7e-41 174.1 283 39.9
AUR62030721 Chenopodium quinoa HOM05D004323 ORTHO05D005140 1.5e-40 171.0 174 56.3
CARHR214700 Cardamine hirsuta HOM05D004323 ORTHO05D005140 2.1e-39 167.2 287 40.4
PSO063G0228 Papaver somniferum HOM05D004323 ORTHO05D005140 6.8e-38 162.2 145 57.2
SEGI_02231 Sequoiadendron giganteum HOM05D004323 ORTHO05D005140 1.5e-37 161.0 181 49.7
AT5G38050 Arabidopsis thaliana HOM05D004323 ORTHO05D005140 2.0e-37 160.6 287 40.8
Carub.0005s1233 Capsella rubella HOM05D004323 ORTHO05D005140 1.3e-36 157.9 282 42.2
Thhalv10027858m.g Eutrema salsugineum HOM05D004323 ORTHO05D005140 1.3e-36 157.9 283 38.5
CSS0030424 Camellia sinensis var. sinensis HOM05D004323 ORTHO05D005140 1.1e-35 154.8 163 53.4
unitig_32.g11885 Utricularia gibba HOM05D004323 ORTHO05D005140 4.6e-34 149.4 282 37.6
SMO268G0019 Selaginella moellendorffii HOM05D004323 ORTHO05D005140 1.3e-33 147.9 172 50.0
AagrBONN_evm.TU.Sc2ySwM_117.2431 Anthoceros agrestis HOM05D004323 ORTHO05D005140 1.0e-30 138.3 117 56.4
AUR62036351 Chenopodium quinoa HOM05D004323 ORTHO05D005140 4.0e-30 136.3 238 44.1
Mapoly0014s0191 Marchantia polymorpha HOM05D004323 ORTHO05D005140 6.8e-30 135.6 280 36.8
AagrBONN_evm.TU.Sc2ySwM_344.4471 Anthoceros agrestis HOM05D004323 ORTHO05D005140 1.5e-29 134.4 281 34.2
CSS0049640 Camellia sinensis var. sinensis HOM05D004323 ORTHO05D005140 4.4e-29 132.9 156 50.0
Pp3c21_20610 Physcomitrium patens HOM05D004323 ORTHO05D005140 1.3e-28 131.3 130 51.5
Pp3c18_1330 Physcomitrium patens HOM05D004323 ORTHO05D005140 1.1e-27 128.3 300 34.3
CBR_g81558 Chara braunii HOM05D004323 ORTHO05D005140 7.0e-27 125.6 133 51.1
Aa31LG9G17280 Aethionema arabicum HOM05D004323 ORTHO05D004022 2.0e-26 124.0 167 46.1
FvH4_7g01202 Fragaria vesca HOM05D004323 ORTHO05D005140 2.7e-26 123.6 77 74.0
MELO3C018369.2 Cucumis melo HOM05D004323 ORTHO05D005140 3.5e-26 123.2 125 58.4
BcaB06g27162 Brassica carinata HOM05D004323 ORTHO05D005140 6.6e-25 119.0 268 33.6
BcaB05g24642 Brassica carinata HOM05D004323 ORTHO05D005140 2.7e-18 97.1 176 40.9
Sed0022868 Sechium edule HOM05D004323 ORTHO05D005140 2.4e-11 73.9 53 73.6
CSS0012754 Camellia sinensis var. sinensis HOM05D004323 ORTHO05D005140 7.1e-11 72.4 137 43.8
AL7G52902 Arabidopsis lyrata HOM05D004323 ORTHO05D005140 7.8e-10 68.9 57 54.4
Nn091s42875 Nelumbo nucifera HOM05D004323 ORTHO05D005140 1.3e-09 68.2 105 45.7
Duzib138G1259 Durio zibethinus HOM05D004323 ORTHO05D005140 1.1e-08 65.1 159 36.5
FAN16G1718 Fragaria x ananassa HOM05D004323 ORTHO05D005140 9.6e-08 62.0 48 60.4
Lsat_1_v5_gn_3_83040 Lactuca sativa HOM05D004323 ORTHO05D005140 6.2e-07 59.3 161 34.2
SEGI_05570 Sequoiadendron giganteum HOM05D004323 ORTHO05D005140 1.1e-06 58.5 107 44.9
Medtr7g114200 Medicago truncatula HOM05D063531 ORTHO05D005140 2.4e-06 57.4 40 67.5
QL02p048579 Quercus lobata HOM05D004323 ORTHO05D005140 5.2e-06 56.2 110 38.2


User provided reference genes

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