Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr05g0228661 Lupinus albus HOM05D003551 ORTHO05D048508 3.0e-79 298.5 156 100.0
Lalb_Chr23g0277731 Lupinus albus HOM05D003551 ORTHO05D004869 6.9e-28 127.9 134 61.2
Lalb_Chr17g0336921 Lupinus albus HOM05D003551 ORTHO05D048508 2.1e-16 89.7 52 86.5
Haze_12293 Corylus avellana HOM05D003551 ORTHO05D004869 2.0e-14 83.2 133 43.6
Glyma.11G244500 Glycine max HOM05D003551 ORTHO05D004869 7.4e-14 81.3 131 46.6
QL05p021165 Quercus lobata HOM05D003551 ORTHO05D004869 1.3e-13 80.5 130 46.9
Hma1.2p1_0079F.1_g041260 Hydrangea macrophylla HOM05D003551 ORTHO05D004869 1.7e-13 80.1 123 42.3
Cfa009260 Carpinus fangiana HOM05D003551 ORTHO05D004869 4.8e-13 78.6 133 42.1
Phvul.001G256500 Phaseolus vulgaris HOM05D003551 ORTHO05D004869 4.8e-13 78.6 137 43.1
Dinv14754 Davidia involucrata HOM05D003551 ORTHO05D004869 1.4e-12 77.0 138 38.4
Rhsim12G0038300 Rhododendron simsii HOM05D003551 ORTHO05D004869 1.4e-12 77.0 141 41.1
Lj6C816T3 Lonicera japonica HOM05D003551 ORTHO05D004869 2.4e-12 76.3 134 39.6
Psat2g160640 Pisum sativum HOM05D003551 ORTHO05D004869 3.1e-12 75.9 138 44.2
TAR374G0468 Trochodendron aralioides HOM05D003551 ORTHO05D004869 4.1e-12 75.5 134 41.0
Ciclev10030726m.g Citrus clementina HOM05D003551 ORTHO05D004869 5.3e-12 75.1 124 41.1
VMungo0540G0742 Vigna mungo HOM05D003551 ORTHO05D004869 5.3e-12 75.1 137 43.1
Ca_25128_v3 Cicer arietinum L. HOM05D003551 ORTHO05D004869 9.1e-12 74.3 125 43.2
CANSAT01G3182 Cannabis sativa HOM05D003551 ORTHO05D004869 1.2e-11 73.9 131 42.0
CSS0025446 Camellia sinensis var. sinensis HOM05D003551 ORTHO05D004869 1.6e-11 73.6 140 39.3
Atru.chr11.1974 Acer truncatum HOM05D003551 ORTHO05D004869 2.0e-11 73.2 124 41.1
DCAR_007035 Daucus carota HOM05D003551 ORTHO05D004869 2.0e-11 73.2 124 41.1
PGR119G0237 Punica granatum HOM05D003551 ORTHO05D004869 2.0e-11 73.2 124 43.5
CiPaw.06G064600 Carya illinoinensis HOM05D003551 ORTHO05D004869 2.6e-11 72.8 124 40.3
Medtr3g086350 Medicago truncatula HOM05D003551 ORTHO05D004869 2.6e-11 72.8 137 41.6
TPR.G5678 Trifolium pratense HOM05D003551 ORTHO05D004869 3.5e-11 72.4 133 42.1
COL.COLO4_23531 Corchorus olitorius HOM05D003551 ORTHO05D004869 4.5e-11 72.0 124 41.9
Thecc.02G267000 Theobroma cacao HOM05D003551 ORTHO05D004869 5.9e-11 71.6 124 41.9
Peaxi162Scf00062g00716 Petunia axillaris HOM05D003551 ORTHO05D004869 7.7e-11 71.2 142 40.1
Duzib268G0822 Durio zibethinus HOM05D003551 ORTHO05D004869 1.0e-10 70.9 124 41.1
Nitab4.5_0001290g0150 Nicotiana tabacum HOM05D003551 ORTHO05D004869 1.7e-10 70.1 142 40.8
Manes.12G019500 Manihot esculenta HOM05D003551 ORTHO05D004869 2.2e-10 69.7 126 39.7
Hund25033 Selenicereus undatus HOM05D003551 ORTHO05D004869 3.8e-10 68.9 125 38.4
Eucgr.H02450 Eucalyptus grandis HOM05D003551 ORTHO05D004869 5.0e-10 68.6 124 41.9
FAN17G0358 Fragaria x ananassa HOM05D003551 ORTHO05D004869 6.5e-10 68.2 135 40.7
Nitab4.5_0004725g0020 Nicotiana tabacum HOM05D003551 ORTHO05D004869 6.5e-10 68.2 124 40.3
FAN22G1040 Fragaria x ananassa HOM05D003551 ORTHO05D004869 8.5e-10 67.8 125 40.0
Cpa.g.sc33.80 Carica papaya HOM05D003551 ORTHO05D004869 1.1e-09 67.4 124 41.1
MELO3C022674.2 Cucumis melo HOM05D003551 ORTHO05D004869 1.1e-09 67.4 118 39.8
CsaV3_1G012700 Cucumis sativus L. HOM05D003551 ORTHO05D004869 1.1e-09 67.4 118 39.8
Lj1g0001310 Lotus japonicus HOM05D003551 ORTHO05D004869 1.1e-09 67.4 133 39.8
PGSC0003DMG400004723 Solanum tuberosum HOM05D003551 ORTHO05D004869 1.1e-09 67.4 142 39.4
vmacro01109 Vaccinium macrocarpon HOM05D003551 ORTHO05D004869 1.9e-09 66.6 144 40.3
Gohir.A12G268000 Gossypium hirsutum HOM05D003551 ORTHO05D004869 2.5e-09 66.2 134 39.6
Solyc12g099890.2 Solanum lycopersicum HOM05D003551 ORTHO05D004869 2.5e-09 66.2 142 38.0
Thhalv10006828m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 3.2e-09 65.9 122 40.2
FvH4_4g25230 Fragaria vesca HOM05D003551 ORTHO05D004869 3.2e-09 65.9 125 39.2
FAN07G2018 Fragaria x ananassa HOM05D003551 ORTHO05D004869 3.2e-09 65.9 125 39.2
FAN12G2593 Fragaria x ananassa HOM05D003551 ORTHO05D004869 3.2e-09 65.9 125 39.2
Gorai.008G288600 Gossypium raimondii HOM05D003551 ORTHO05D004869 3.2e-09 65.9 134 39.6
RcHm_v2.0_Chr4g0432421 Rosa chinensis HOM05D003551 ORTHO05D004869 3.2e-09 65.9 125 39.2
ClCG03G002050 Citrullus lanatus HOM05D003551 ORTHO05D004869 4.2e-09 65.5 118 38.1
Migut.K00634 Erythranthe guttata HOM05D003551 ORTHO05D004869 4.2e-09 65.5 127 40.9
C08p46730 Brassica napus HOM05D003551 ORTHO05D004869 7.2e-09 64.7 119 41.2
BolC8t52212H Brassica oleracea HOM05D003551 ORTHO05D004869 7.2e-09 64.7 119 41.2
THA.LOC104809236 Tarenaya hassleriana HOM05D003551 ORTHO05D004869 7.2e-09 64.7 125 39.2
TWI75G1217 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 7.2e-09 64.7 131 40.5
BraA09t41676Z Brassica rapa HOM05D003551 ORTHO05D004869 9.4e-09 64.3 119 40.3
MD16G1105900 Malus domestica HOM05D003551 ORTHO05D004869 9.4e-09 64.3 140 38.6
TWI36G0896 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 9.4e-09 64.3 131 39.7
HanXRQChr08g0208471 Helianthus annuus HOM05D003551 ORTHO05D004869 1.2e-08 63.9 127 37.0
Sopen12g034510 Solanum pennellii HOM05D003551 ORTHO05D004869 1.2e-08 63.9 142 37.3
Gohir.D12G268400 Gossypium hirsutum HOM05D003551 ORTHO05D004869 1.6e-08 63.5 137 38.7
Aqoxy3G00657 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 2.1e-08 63.2 128 36.7
Aqoxy3G01365 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 2.1e-08 63.2 128 36.7
A09p63240 Brassica napus HOM05D003551 ORTHO05D004869 2.1e-08 63.2 119 40.3
LjContig00312_ERROPOS870357g0004032 Lotus japonicus HOM05D003551 ORTHO05D004869 3.6e-08 62.4 120 40.8
arahy.Tifrunner.gnm1.ann1.A5BQBU Arachis hypogaea HOM05D003551 ORTHO05D004869 6.1e-08 61.6 124 38.7
MELO3C026845.2 Cucumis melo HOM05D003551 ORTHO05D004869 6.1e-08 61.6 118 39.0
Prupe.1G240500 Prunus persica HOM05D003551 ORTHO05D004869 6.1e-08 61.6 125 39.2
EL10Ac6g14297 Beta vulgaris HOM05D003551 ORTHO05D004869 1.0e-07 60.8 120 37.5
ECA240G1955 Erigeron canadensis HOM05D003551 ORTHO05D004869 1.0e-07 60.8 127 36.2
Thhalv10005577m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 1.0e-07 60.8 124 37.9
ATR0824G183 Amborella trichopoda HOM05D003551 ORTHO05D004869 1.8e-07 60.1 134 38.8
arahy.Tifrunner.gnm1.ann1.MWLQ6N Arachis hypogaea HOM05D003551 ORTHO05D004869 1.8e-07 60.1 124 37.9
Sc04g0005980 Simmondsia chinensis HOM05D003551 ORTHO05D004869 1.8e-07 60.1 135 34.1
AL1G24840 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 2.3e-07 59.7 122 37.7
Sabra08G0139300 Salix brachista HOM05D003551 ORTHO05D004869 2.3e-07 59.7 132 38.6
arahy.Tifrunner.gnm1.ann1.5TZZ24 Arachis hypogaea HOM05D003551 ORTHO05D004869 3.0e-07 59.3 124 39.5
Sp1g11680 Schrenkiella parvula HOM05D003551 ORTHO05D004869 3.0e-07 59.3 121 38.0
Carub.0003s0103 Capsella rubella HOM05D003551 ORTHO05D004869 4.0e-07 58.9 120 40.0
arahy.Tifrunner.gnm1.ann1.X9TT4V Arachis hypogaea HOM05D003551 ORTHO05D004869 5.2e-07 58.5 184 35.3
CAN.G484.3 Capsicum annuum HOM05D003551 ORTHO05D004869 5.2e-07 58.5 101 41.6
MSTRG.7955 Avicennia marina HOM05D003551 ORTHO05D004869 6.7e-07 58.2 124 37.1
Oeu014152.4 Olea europaea HOM05D003551 ORTHO05D004869 8.8e-07 57.8 124 37.9
Potri.008G182900 Populus trichocarpa HOM05D003551 ORTHO05D004869 8.8e-07 57.8 130 39.2
Sed0023493 Sechium edule HOM05D003551 ORTHO05D004869 8.8e-07 57.8 113 34.5
unitig_22.g6421 Utricularia gibba HOM05D003551 ORTHO05D004869 8.8e-07 57.8 136 35.3
TWI34G1512 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 1.2e-06 57.4 102 39.2
Aa31LG1G1640 Aethionema arabicum HOM05D003551 ORTHO05D004869 2.0e-06 56.6 121 36.4
AT1G13160 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 2.0e-06 56.6 122 36.1
Carub.0001s1289 Capsella rubella HOM05D003551 ORTHO05D004869 2.6e-06 56.2 119 37.8
SalBow2G2049 Salvia bowleyana HOM05D003551 ORTHO05D004869 2.6e-06 56.2 124 36.3
arahy.Tifrunner.gnm1.ann1.006XS9 Arachis hypogaea HOM05D003551 ORTHO05D004869 3.3e-06 55.8 124 37.9
Actinidia08116 Actinidia chinensis HOM05D003551 ORTHO05D004869 4.4e-06 55.5 110 39.1
AL7G20520 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 5.7e-06 55.1 119 37.0
CDE02G2789 Ceratophyllum demersum HOM05D003551 ORTHO05D004869 9.7e-06 54.3 123 35.8


User provided reference genes

Program Settings