Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr05g0228491 Lupinus albus HOM05D006387 ORTHO05D008533 2.2e-134 482.3 240 100.0
Ca_22597_v3 Cicer arietinum L. HOM05D006387 ORTHO05D008533 2.8e-105 385.6 237 81.9
Lj4g0015074 Lotus japonicus HOM05D006387 ORTHO05D008533 1.1e-104 383.6 237 82.3
Glyma.18G146100 Glycine max HOM05D006387 ORTHO05D008533 1.6e-103 379.8 234 81.2
Psat4g119200 Pisum sativum HOM05D006387 ORTHO05D008533 1.0e-102 377.1 237 80.6
Medtr8g068855 Medicago truncatula HOM05D006387 ORTHO05D008533 1.1e-101 373.6 240 80.0
TPR.G14610 Trifolium pratense HOM05D006387 ORTHO05D008533 6.8e-99 364.4 209 86.1
CiPaw.01G046800 Carya illinoinensis HOM05D006387 ORTHO05D008533 1.5e-98 363.2 234 77.8
arahy.Tifrunner.gnm1.ann1.ZYRR1K Arachis hypogaea HOM05D006387 ORTHO05D008533 3.4e-98 362.1 232 80.2
arahy.Tifrunner.gnm1.ann1.K640S8 Arachis hypogaea HOM05D006387 ORTHO05D008533 1.7e-97 359.8 232 79.7
Dinv13619 Davidia involucrata HOM05D006387 ORTHO05D008533 2.2e-97 359.4 244 75.4
Cfa004350 Carpinus fangiana HOM05D006387 ORTHO05D008533 4.9e-97 358.2 226 79.2
Phvul.003G289400 Phaseolus vulgaris HOM05D006387 ORTHO05D008533 2.4e-96 355.9 232 77.6
QL06p047416 Quercus lobata HOM05D006387 ORTHO05D008533 4.1e-96 355.1 205 83.9
QL93p1865_0022 Quercus lobata HOM05D006387 ORTHO05D008533 4.1e-96 355.1 205 83.9
CsaV3_6G045090 Cucumis sativus L. HOM05D006387 ORTHO05D008533 1.3e-94 350.1 214 79.9
Gorai.007G233200 Gossypium raimondii HOM05D006387 ORTHO05D008533 1.3e-94 350.1 211 80.6
Prupe.6G197200 Prunus persica HOM05D006387 ORTHO05D008533 3.8e-94 348.6 215 80.9
MELO3C007722.2 Cucumis melo HOM05D006387 ORTHO05D008533 5.0e-94 348.2 207 81.6
Cpa.g.sc55.48 Carica papaya HOM05D006387 ORTHO05D008533 8.6e-94 347.4 205 80.5
Manes.12G127300 Manihot esculenta HOM05D006387 ORTHO05D008533 8.6e-94 347.4 214 78.0
PGSC0003DMG400016205 Solanum tuberosum HOM05D006387 ORTHO05D008533 8.6e-94 347.4 210 77.6
Peaxi162Scf00447g00119 Petunia axillaris HOM05D006387 ORTHO05D008533 2.5e-93 345.9 224 73.7
TWI53G0307 Tripterygium wilfordii HOM05D006387 ORTHO05D008533 4.3e-93 345.1 244 72.1
Solyc11g010510.2 Solanum lycopersicum HOM05D006387 ORTHO05D008533 5.6e-93 344.7 232 72.8
Ciclev10026362m.g Citrus clementina HOM05D006387 ORTHO05D008533 1.6e-92 343.2 225 75.6
Thecc.01G091900 Theobroma cacao HOM05D006387 ORTHO05D008533 1.6e-92 343.2 211 78.7
Haze_15057 Corylus avellana HOM05D000344 ORTHO05D000934 6.1e-92 341.3 189 86.8
Sopen11g005290 Solanum pennellii HOM05D006387 ORTHO05D008533 8.0e-92 340.9 231 71.9
SalBow5G0849 Salvia bowleyana HOM05D006387 ORTHO05D008533 1.4e-91 340.1 218 75.2
Lju188A1T76 Lonicera japonica HOM05D006387 ORTHO05D008533 1.8e-91 339.7 199 81.4
RcHm_v2.0_Chr2g0111431 Rosa chinensis HOM05D006387 ORTHO05D008533 1.8e-91 339.7 246 71.1
Sed0018819 Sechium edule HOM05D006387 ORTHO05D008533 1.8e-91 339.7 198 82.8
Nitab4.5_0001468g0050 Nicotiana tabacum HOM05D006387 ORTHO05D008533 8.9e-91 337.4 199 79.4
Lj4A270T42 Lonicera japonica HOM05D006387 ORTHO05D008533 2.0e-90 336.3 199 80.4
Nitab4.5_0010196g0030 Nicotiana tabacum HOM05D006387 ORTHO05D008533 2.0e-90 336.3 241 69.7
Atru.chr3.1288 Acer truncatum HOM05D006387 ORTHO05D008533 3.4e-90 335.5 223 73.5
CAN.G1388.12 Capsicum annuum HOM05D006387 ORTHO05D008533 3.4e-90 335.5 227 72.2
PGR102G1540 Punica granatum HOM05D006387 ORTHO05D008533 3.4e-90 335.5 232 70.3
Cc07_g14250 Coffea canephora HOM05D006387 ORTHO05D008533 4.4e-90 335.1 199 79.9
MSTRG.15694 Avicennia marina HOM05D006387 ORTHO05D008533 5.7e-90 334.7 213 75.1
Gohir.D11G217100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 5.7e-90 334.7 219 75.8
Migut.K00786 Erythranthe guttata HOM05D006387 ORTHO05D008533 1.3e-89 333.6 198 79.3
Gohir.A11G206500 Gossypium hirsutum HOM05D006387 ORTHO05D008533 2.9e-89 332.4 224 74.6
FAN26G1841 Fragaria x ananassa HOM05D006387 ORTHO05D008533 6.4e-89 331.3 251 69.3
MD15G1314800 Malus domestica HOM05D006387 ORTHO05D008533 6.4e-89 331.3 198 81.3
ECA238G0943 Erigeron canadensis HOM05D006387 ORTHO05D008533 3.2e-88 328.9 213 76.5
Potri.007G010400 Populus trichocarpa HOM05D006387 ORTHO05D008533 3.2e-88 328.9 215 74.4
THA.LOC104804173 Tarenaya hassleriana HOM05D006387 ORTHO05D008533 3.2e-88 328.9 201 79.1
Sc16g0000480 Simmondsia chinensis HOM05D006387 ORTHO05D008533 4.1e-88 328.6 221 72.9
vmacro18567 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 7.0e-88 327.8 199 78.4
Eucgr.H04725 Eucalyptus grandis HOM05D006387 ORTHO05D008533 1.6e-87 326.6 196 77.6
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 4.6e-87 325.1 206 73.8
FvH4_1g19820 Fragaria vesca HOM05D006387 ORTHO05D008533 7.8e-87 324.3 251 67.7
Sabra07G0007900 Salix brachista HOM05D006387 ORTHO05D008533 1.0e-86 323.9 207 75.8
Rhsim08G0015000 Rhododendron simsii HOM05D006387 ORTHO05D008533 3.0e-86 322.4 197 77.7
GSVIVG01003594001 Vitis vinifera HOM05D006387 ORTHO05D008533 3.0e-86 322.4 243 67.9
GSVIVG01006732001 Vitis vinifera HOM05D006387 ORTHO05D008533 3.0e-86 322.4 243 67.9
HanXRQChr14g0442661 Helianthus annuus HOM05D006387 ORTHO05D008533 6.6e-86 321.2 232 70.7
Aa31LG6G15050 Aethionema arabicum HOM05D006387 ORTHO05D008533 3.3e-85 318.9 204 75.5
Thhalv10026114m.g Eutrema salsugineum HOM05D006387 ORTHO05D008533 3.3e-85 318.9 211 73.5
Carub.0007s0212 Capsella rubella HOM05D006387 ORTHO05D008533 5.6e-85 318.2 206 75.7
unitig_748.g8645 Utricularia gibba HOM05D006387 ORTHO05D008533 7.3e-85 317.8 207 73.4
FAN19G3199 Fragaria x ananassa HOM05D006387 ORTHO05D008533 1.2e-84 317.0 247 67.6
ClCG01G018420 Citrullus lanatus HOM05D006387 ORTHO05D008533 2.1e-84 316.2 214 72.9
Duzib187G0618 Durio zibethinus HOM05D006387 ORTHO05D008533 2.1e-84 316.2 212 72.2
MBI06_g39563_MAGBIO Magnolia biondii HOM05D006387 ORTHO05D008533 2.1e-84 316.2 214 72.0
PSO541G2357 Papaver somniferum HOM05D006387 ORTHO05D008533 4.7e-84 315.1 220 68.2
EL10Ac6g15218 Beta vulgaris HOM05D006387 ORTHO05D008533 6.2e-84 314.7 231 68.4
A04p09020 Brassica napus HOM05D006387 ORTHO05D008533 6.2e-84 314.7 208 73.6
BraA04t16597Z Brassica rapa HOM05D006387 ORTHO05D008533 6.2e-84 314.7 208 73.6
C04p42900 Brassica napus HOM05D006387 ORTHO05D008533 2.3e-83 312.8 208 73.1
AUR62017959 Chenopodium quinoa HOM05D006387 ORTHO05D008533 2.3e-83 312.8 240 67.1
AUR62003651 Chenopodium quinoa HOM05D006387 ORTHO05D008533 4.0e-83 312.0 244 65.2
BcaC02g09451 Brassica carinata HOM05D006387 ORTHO05D008533 6.8e-83 311.2 208 72.6
Lsat_1_v5_gn_2_70881 Lactuca sativa HOM05D006387 ORTHO05D008533 6.8e-83 311.2 198 76.8
BolC4t25859H Brassica oleracea HOM05D006387 ORTHO05D008533 1.2e-82 310.5 208 72.6
BcaNung03133 Brassica carinata HOM05D006387 ORTHO05D008533 1.5e-82 310.1 210 71.0
Sp7g10120 Schrenkiella parvula HOM05D006387 ORTHO05D008533 7.5e-82 307.8 211 71.6
CANSAT01G3264 Cannabis sativa HOM05D006387 ORTHO05D008533 9.8e-82 307.4 184 81.5
Hund16539 Selenicereus undatus HOM05D006387 ORTHO05D008533 9.8e-82 307.4 210 71.4
Nn5g29908 Nelumbo nucifera HOM05D006387 ORTHO05D008533 6.4e-81 304.7 225 67.6
Aqoxy6G01447 Aquilegia oxysepala HOM05D006387 ORTHO05D008533 1.9e-80 303.1 198 72.2
AL7G12534 Arabidopsis lyrata HOM05D006387 ORTHO05D008533 2.4e-80 302.8 212 71.2
Actinidia26608 Actinidia chinensis HOM05D006387 ORTHO05D008533 3.9e-78 295.4 199 71.9
CDE08G1301 Ceratophyllum demersum HOM05D006387 ORTHO05D008533 1.2e-76 290.4 195 70.3
FAN28G2490 Fragaria x ananassa HOM05D006387 ORTHO05D008533 6.2e-76 288.1 222 68.9
Zm00001eb038350 Zea mays HOM05D006387 ORTHO05D008533 3.4e-74 282.3 194 67.5
Os08g0478100 Oryza sativa ssp. japonica HOM05D006387 ORTHO05D008533 1.7e-73 280.0 192 68.2
ATR0022G066 Amborella trichopoda HOM05D006387 ORTHO05D008533 1.9e-72 276.6 201 64.2
Glyma.08G280000 Glycine max HOM05D006387 ORTHO05D008533 6.8e-67 258.1 164 81.1
SEGI_33925 Sequoiadendron giganteum HOM05D006387 ORTHO05D008533 3.5e-63 245.7 230 52.2
vmacro09229 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 5.1e-62 241.9 147 77.6
CSS0019105 Camellia sinensis var. sinensis HOM05D006387 ORTHO05D008533 1.2e-58 230.7 129 86.0
Gorai.007G059200 Gossypium raimondii HOM05D006387 ORTHO05D008533 2.6e-58 229.6 239 54.4
Gohir.D11G054100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 7.1e-56 221.5 239 54.0
AT4G38090 Arabidopsis thaliana HOM05D006387 ORTHO05D008533 4.8e-52 208.8 144 72.2
Pp3c7_18820 Physcomitrium patens HOM05D006387 ORTHO05D008533 1.2e-50 204.1 195 50.3
vmacro14991 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 2.2e-49 199.9 159 63.5
Gohir.A11G050750 Gossypium hirsutum HOM05D006387 ORTHO05D008533 1.3e-46 190.7 245 48.2
VMungo0251G0198 Vigna mungo HOM05D006387 ORTHO05D008533 1.5e-45 187.2 130 74.6
AagrBONN_evm.TU.Sc2ySwM_344.3556 Anthoceros agrestis HOM05D006387 ORTHO05D008533 2.4e-43 179.9 152 53.3
SMO361G0736 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 5.8e-42 175.3 131 63.4
Cre10.g448800 Chlamydomonas reinhardtii HOM05D006387 ORTHO05D008533 1.7e-41 173.7 193 45.1
TPR.G1343 Trifolium pratense HOM05D000744 ORTHO05D000332 3.8e-41 172.6 97 84.5
FAN23G2995 Fragaria x ananassa HOM05D006387 ORTHO05D008533 1.8e-35 153.7 147 59.9
vmacro10806 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 4.5e-34 149.1 112 66.1
HPP92_016734 Vanilla planifolia HOM05D006387 ORTHO05D008533 4.9e-33 145.6 121 61.2
PRCOL_00004912 Prasinoderma coloniale HOM05D006387 ORTHO05D008533 7.9e-31 138.3 194 39.7
MCO03G602 Micromonas commoda HOM05D006387 ORTHO05D008533 1.0e-30 137.9 208 37.5
SMO361G0739 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 1.0e-30 137.9 98 66.3
CARHR246490 Cardamine hirsuta HOM05D006387 ORTHO05D008533 2.3e-30 136.7 99 69.7
SMO361G0500 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 6.7e-30 135.2 136 47.8
RcHm_v2.0_Chr2g0111411 Rosa chinensis HOM05D006387 ORTHO05D008533 5.7e-29 132.1 135 55.6
Ah.03g140080 Amaranthus hybridus HOM05D006387 ORTHO05D008533 1.8e-19 100.5 71 62.0
COL.COLO4_27345 Corchorus olitorius HOM05D000344 ORTHO05D000934 9.1e-19 98.2 77 61.0
HanXRQChr16g0520881 Helianthus annuus HOM05D006387 ORTHO05D008533 9.4e-16 88.2 51 80.4
Hma1.2p1_0119F.1_g056580 Hydrangea macrophylla HOM05D006387 ORTHO05D008533 2.1e-15 87.0 53 71.7
SMO004G0012 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 6.3e-12 75.5 64 57.8
vmacro18230 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 3.4e-10 69.7 60 55.0
vmacro18321 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 3.4e-10 69.7 55 56.4
HPP92_016750 Vanilla planifolia HOM05D006387 ORTHO05D008533 1.7e-09 67.4 81 50.6
vmacro18566 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 3.8e-09 66.2 51 58.8
Actinidia06523 Actinidia chinensis HOM05D009440 ORTHO05D011919 1.4e-08 64.3 43 72.1


User provided reference genes

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