Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr05g0217811 Lupinus albus HOM05D004488 ORTHO05D005374 1.4e-102 376.3 196 100.0
Lalb_Chr16g0382951 Lupinus albus HOM05D004488 ORTHO05D005374 6.8e-81 304.3 196 81.1
Glyma.07G182000 Glycine max HOM05D004488 ORTHO05D005374 1.4e-73 280.0 196 74.0
Phvul.002G213000 Phaseolus vulgaris HOM05D004488 ORTHO05D005374 6.8e-73 277.7 196 75.0
Glyma.08G067800 Glycine max HOM05D004488 ORTHO05D005374 2.6e-72 275.8 196 74.5
VMungo0251G0098 Vigna mungo HOM05D004488 ORTHO05D005374 3.7e-71 271.9 196 74.5
QL11p025232 Quercus lobata HOM05D004488 ORTHO05D005374 5.4e-70 268.1 178 74.7
Thecc.02G129200 Theobroma cacao HOM05D004488 ORTHO05D005374 1.0e-68 263.8 196 70.4
COL.COLO4_32390 Corchorus olitorius HOM05D004488 ORTHO05D005374 2.3e-68 262.7 195 70.8
Gohir.D13G049600 Gossypium hirsutum HOM05D004488 ORTHO05D005374 6.6e-68 261.2 198 70.2
CANSAT54G1769 Cannabis sativa HOM05D004488 ORTHO05D005374 1.5e-67 260.0 188 70.2
Glyma.13G256500 Glycine max HOM05D004488 ORTHO05D005374 4.3e-67 258.5 197 67.5
TWI14G0417 Tripterygium wilfordii HOM05D004488 ORTHO05D005374 9.5e-67 257.3 196 69.4
Gohir.A13G050800 Gossypium hirsutum HOM05D004488 ORTHO05D005374 2.8e-66 255.8 198 69.2
CARHR241720 Cardamine hirsuta HOM05D004488 ORTHO05D005374 3.6e-66 255.4 189 68.8
Manes.07G041900 Manihot esculenta HOM05D004488 ORTHO05D005374 3.6e-66 255.4 179 72.6
Medtr2g009630 Medicago truncatula HOM05D004488 ORTHO05D005374 4.7e-66 255.0 197 66.0
Phvul.006G201800 Phaseolus vulgaris HOM05D004488 ORTHO05D005374 4.7e-66 255.0 198 66.2
arahy.Tifrunner.gnm1.ann1.YWY5YF Arachis hypogaea HOM05D004488 ORTHO05D005374 1.1e-65 253.8 177 72.3
Potri.017G043200 Populus trichocarpa HOM05D004488 ORTHO05D005374 1.4e-65 253.4 170 75.9
arahy.Tifrunner.gnm1.ann1.80YYCP Arachis hypogaea HOM05D004488 ORTHO05D005374 2.3e-65 252.7 177 71.8
Manes.10G097800 Manihot esculenta HOM05D004488 ORTHO05D005374 3.1e-65 252.3 196 68.9
SGA_v2.0_scaffold83G26377 Striga asiatica HOM05D004488 ORTHO05D005374 3.1e-65 252.3 194 67.5
FAN20G0168 Fragaria x ananassa HOM05D004488 ORTHO05D005374 8.9e-65 250.8 182 70.9
Thhalv10026279m.g Eutrema salsugineum HOM05D004488 ORTHO05D005374 1.2e-64 250.4 191 65.4
Dinv16003 Davidia involucrata HOM05D004488 ORTHO05D005374 2.6e-64 249.2 184 69.0
CiPaw.06G157800 Carya illinoinensis HOM05D004488 ORTHO05D005374 3.4e-64 248.8 196 67.9
BcaNung02186 Brassica carinata HOM05D004488 ORTHO05D005374 4.4e-64 248.4 194 63.9
Eucgr.G00989 Eucalyptus grandis HOM05D004488 ORTHO05D005374 4.4e-64 248.4 172 72.1
Sp7g31350 Schrenkiella parvula HOM05D004488 ORTHO05D005374 5.8e-64 248.1 189 65.1
Prupe.8G070100 Prunus persica HOM05D004488 ORTHO05D005374 9.9e-64 247.3 195 66.2
Hund06459 Selenicereus undatus HOM05D004488 ORTHO05D005374 3.7e-63 245.4 177 68.9
Lj4g0013422 Lotus japonicus HOM05D004488 ORTHO05D005374 6.4e-63 244.6 173 74.0
AT4G33625 Arabidopsis thaliana HOM05D004488 ORTHO05D005374 1.1e-62 243.8 191 63.9
Carub.0007s0681 Capsella rubella HOM05D004488 ORTHO05D005374 1.1e-62 243.8 190 63.7
Cpa.g.sc20.3 Carica papaya HOM05D004488 ORTHO05D005374 1.4e-62 243.4 190 66.8
FvH4_2g11740 Fragaria vesca HOM05D004488 ORTHO05D005374 1.4e-62 243.4 182 68.7
Nn5g29881 Nelumbo nucifera HOM05D004488 ORTHO05D005374 1.4e-62 243.4 196 67.3
THA.LOC104807182 Tarenaya hassleriana HOM05D004488 ORTHO05D005374 1.9e-62 243.0 191 63.9
Ciclev10029296m.g Citrus clementina HOM05D004488 ORTHO05D005374 2.4e-62 242.7 206 61.7
unitig_0.g894 Utricularia gibba HOM05D004488 ORTHO05D005374 2.4e-62 242.7 179 68.2
TAR381G0147 Trochodendron aralioides HOM05D004488 ORTHO05D005374 3.2e-62 242.3 196 64.3
CiPaw.05G029400 Carya illinoinensis HOM05D004488 ORTHO05D005374 5.4e-62 241.5 192 66.7
AL7G17880 Arabidopsis lyrata HOM05D004488 ORTHO05D005374 7.1e-62 241.1 191 63.4
MD05G1047700 Malus domestica HOM05D004488 ORTHO05D005374 7.1e-62 241.1 193 65.8
Psat1g214000 Pisum sativum HOM05D004488 ORTHO05D005374 7.1e-62 241.1 186 66.1
C07p59770 Brassica napus HOM05D004488 ORTHO05D005374 9.2e-62 240.7 203 61.1
BolC7t46423H Brassica oleracea HOM05D004488 ORTHO05D005374 9.2e-62 240.7 203 61.1
Duzib132G0794 Durio zibethinus HOM05D004488 ORTHO05D005374 1.6e-61 240.0 199 63.8
MBI16_g12465_MAGBIO Magnolia biondii HOM05D004488 ORTHO05D005374 1.6e-61 240.0 193 65.3
GSVIVG01015661001 Vitis vinifera HOM05D004488 ORTHO05D005374 1.6e-61 240.0 175 69.7
RcHm_v2.0_Chr6g0270971 Rosa chinensis HOM05D004488 ORTHO05D005374 2.1e-61 239.6 171 71.3
CSS0011276 Camellia sinensis var. sinensis HOM05D004488 ORTHO05D005374 2.7e-61 239.2 198 64.1
PGR042G1599 Punica granatum HOM05D004488 ORTHO05D005374 2.7e-61 239.2 180 71.1
A01p04690 Brassica napus HOM05D004488 ORTHO05D005374 6.0e-61 238.0 200 63.5
BraA01t00452Z Brassica rapa HOM05D004488 ORTHO05D005374 6.0e-61 238.0 200 63.5
Gorai.013G055400 Gossypium raimondii HOM05D004488 ORTHO05D005374 7.8e-61 237.7 179 68.7
HPP92_019609 Vanilla planifolia HOM05D004488 ORTHO05D005374 7.8e-61 237.7 193 61.7
C01p05080 Brassica napus HOM05D004488 ORTHO05D005374 1.3e-60 236.9 176 67.6
BolC1t00490H Brassica oleracea HOM05D004488 ORTHO05D005374 1.3e-60 236.9 176 67.6
MD10G1054500 Malus domestica HOM05D004488 ORTHO05D005374 1.7e-60 236.5 193 62.7
MSTRG.16621 Avicennia marina HOM05D004488 ORTHO05D005374 2.3e-60 236.1 180 64.4
Sc18g0007070 Simmondsia chinensis HOM05D004488 ORTHO05D005374 2.3e-60 236.1 177 65.5
Lsat_1_v5_gn_5_110001 Lactuca sativa HOM05D004488 ORTHO05D005374 3.0e-60 235.7 199 58.3
Sopen01g048360 Solanum pennellii HOM05D004488 ORTHO05D005374 3.0e-60 235.7 200 60.0
CSS0006356 Camellia sinensis var. sinensis HOM05D004488 ORTHO05D005374 3.9e-60 235.3 198 63.1
CSS0028940 Camellia sinensis var. sinensis HOM05D004488 ORTHO05D005374 5.1e-60 235.0 168 69.6
Atru.chr6.1271 Acer truncatum HOM05D004488 ORTHO05D005374 8.6e-60 234.2 196 61.7
Migut.B00550 Erythranthe guttata HOM05D004488 ORTHO05D005374 8.6e-60 234.2 180 67.2
Solyc01g105980.3 Solanum lycopersicum HOM05D004488 ORTHO05D005374 8.6e-60 234.2 200 59.5
Ah.01g023950 Amaranthus hybridus HOM05D004488 ORTHO05D005374 1.1e-59 233.8 177 67.2
Hma1.2p1_0908F.1_g235500 Hydrangea macrophylla HOM05D004488 ORTHO05D005374 1.9e-59 233.0 198 60.1
Lj6g0006499 Lotus japonicus HOM05D004488 ORTHO05D005374 3.3e-59 232.3 200 65.5
AUR62027109 Chenopodium quinoa HOM05D004488 ORTHO05D005374 7.3e-59 231.1 183 63.9
BraA03t15251Z Brassica rapa HOM05D004488 ORTHO05D005374 9.5e-59 230.7 177 63.8
AUR62012885 Chenopodium quinoa HOM05D004488 ORTHO05D005374 9.5e-59 230.7 202 57.9
PGSC0003DMG400033581 Solanum tuberosum HOM05D004488 ORTHO05D005374 2.1e-58 229.6 200 59.0
VMungo0540G1072 Vigna mungo HOM05D004488 ORTHO05D005374 2.8e-58 229.2 196 60.7
BcaC09g52174 Brassica carinata HOM05D004488 ORTHO05D005374 3.6e-58 228.8 157 68.8
ECA234G4299 Erigeron canadensis HOM05D004488 ORTHO05D005374 3.6e-58 228.8 199 57.3
Nn1g05574 Nelumbo nucifera HOM05D004488 ORTHO05D005374 3.6e-58 228.8 180 66.1
Sabra17G0029400 Salix brachista HOM05D004488 ORTHO05D005374 3.6e-58 228.8 150 75.3
Actinidia02393 Actinidia chinensis HOM05D004488 ORTHO05D005374 6.2e-58 228.0 180 63.3
Peaxi162Scf00299g00625 Petunia axillaris HOM05D004488 ORTHO05D005374 8.1e-58 227.6 176 63.6
Hund00379 Selenicereus undatus HOM05D004488 ORTHO05D005374 8.1e-58 227.6 215 55.3
Aqoxy5G01383 Aquilegia oxysepala HOM05D004488 ORTHO05D005374 1.1e-57 227.3 200 59.0
CsaV3_4G014750 Cucumis sativus L. HOM05D004488 ORTHO05D005374 1.1e-57 227.3 201 61.2
Rhsim11G0142400 Rhododendron simsii HOM05D004488 ORTHO05D005374 3.1e-57 225.7 187 63.6
Aa31sc21G80 Aethionema arabicum HOM05D004488 ORTHO05D005374 4.0e-57 225.3 226 52.2
EL10Ac9g22071 Beta vulgaris HOM05D004488 ORTHO05D005374 4.0e-57 225.3 177 64.4
HanXRQChr16g0514551 Helianthus annuus HOM05D004488 ORTHO05D005374 4.0e-57 225.3 193 58.5
SalBow6G2847 Salvia bowleyana HOM05D004488 ORTHO05D005374 5.2e-57 224.9 161 68.9
SalBow6G6277 Salvia bowleyana HOM05D004488 ORTHO05D005374 5.2e-57 224.9 161 68.9
Oeu029681.1 Olea europaea HOM05D004488 ORTHO05D005374 6.8e-57 224.6 172 65.7
FAN24G0482 Fragaria x ananassa HOM05D004488 ORTHO05D005374 1.2e-56 223.8 182 65.4
CAN.G997.3 Capsicum annuum HOM05D004488 ORTHO05D005374 2.0e-56 223.0 169 64.5
vmacro01860 Vaccinium macrocarpon HOM05D004488 ORTHO05D005374 2.6e-56 222.6 201 60.7
CDE01G0475 Ceratophyllum demersum HOM05D004488 ORTHO05D005374 3.4e-56 222.2 190 61.1
CDE04G0584 Ceratophyllum demersum HOM05D004488 ORTHO05D005374 4.4e-56 221.9 172 64.5
HanXRQChr10g0289991 Helianthus annuus HOM05D004488 ORTHO05D005374 4.4e-56 221.9 200 58.0
Sed0014769 Sechium edule HOM05D004488 ORTHO05D005374 5.8e-56 221.5 172 67.4
Actinidia00306 Actinidia chinensis HOM05D004488 ORTHO05D005374 4.9e-55 218.4 164 68.3
PSO210G5219 Papaver somniferum HOM05D004488 ORTHO05D005374 6.4e-55 218.0 194 59.3
Oeu010528.2 Olea europaea HOM05D004488 ORTHO05D005374 1.1e-54 217.2 197 58.9
TAR625G0886 Trochodendron aralioides HOM05D004488 ORTHO05D005374 1.1e-54 217.2 173 65.3
ClCG10G009630 Citrullus lanatus HOM05D004488 ORTHO05D005374 2.4e-54 216.1 221 56.1
Nitab4.5_0001636g0030 Nicotiana tabacum HOM05D004488 ORTHO05D005374 5.4e-54 214.9 191 57.6
Nitab4.5_0002095g0050 Nicotiana tabacum HOM05D004488 ORTHO05D005374 7.1e-54 214.5 181 59.7
ATR0767G217 Amborella trichopoda HOM05D004488 ORTHO05D005374 9.2e-54 214.2 203 58.6
Rhsim11G0140000 Rhododendron simsii HOM05D004488 ORTHO05D005374 1.2e-53 213.8 203 58.6
Potri.007G115800 Populus trichocarpa HOM05D004488 ORTHO05D005374 4.6e-53 211.8 191 59.7
PSO541G1276 Papaver somniferum HOM05D004488 ORTHO05D005374 7.8e-53 211.1 191 59.7
PSO675G8955 Papaver somniferum HOM05D004488 ORTHO05D005374 5.1e-52 208.4 194 58.8
Os07g0118300 Oryza sativa ssp. japonica HOM05D004488 ORTHO05D005374 9.6e-51 204.1 171 60.2
Rhsim11G0142300 Rhododendron simsii HOM05D004488 ORTHO05D005374 3.6e-50 202.2 167 61.1
SEGI_26358 Sequoiadendron giganteum HOM05D004488 ORTHO05D005374 3.6e-50 202.2 167 61.1
Zm00001eb118020 Zea mays HOM05D004488 ORTHO05D005374 6.2e-50 201.4 171 63.2
MELO3C018054.2 Cucumis melo HOM05D004488 ORTHO05D005374 7.6e-48 194.5 167 62.9
TAR625G0448 Trochodendron aralioides HOM05D004488 ORTHO05D005374 3.8e-47 192.2 141 67.4
Aqoxy6G00871 Aquilegia oxysepala HOM05D004488 ORTHO05D005374 1.1e-46 190.7 188 55.9
Cc02_g20910 Coffea canephora HOM05D004488 ORTHO05D005374 1.1e-46 190.7 181 55.8
Rhsim11G0139900 Rhododendron simsii HOM05D004488 ORTHO05D005374 4.2e-46 188.7 188 53.7
DCAR_032425 Daucus carota HOM05D004488 ORTHO05D005374 9.6e-43 177.6 172 55.8
SMO361G0333 Selaginella moellendorffii HOM05D004488 ORTHO05D005374 2.1e-42 176.4 166 56.0
Sed0000556 Sechium edule HOM05D004488 ORTHO05D005374 2.8e-42 176.0 147 63.3
Zm00001eb299000 Zea mays HOM05D004488 ORTHO05D005374 6.9e-41 171.4 165 53.9
SMO361G0551 Selaginella moellendorffii HOM05D004488 ORTHO05D005374 1.7e-39 166.8 163 52.8
Lj5C230T1 Lonicera japonica HOM05D004488 ORTHO05D005374 3.2e-38 162.5 200 46.0
AagrBONN_evm.TU.Sc2ySwM_117.2605 Anthoceros agrestis HOM05D004488 ORTHO05D005374 1.8e-33 146.7 167 49.7
Pp3c15_10510 Physcomitrium patens HOM05D004488 ORTHO05D005374 2.9e-31 139.4 193 41.5
TWI59G0067 Tripterygium wilfordii HOM05D004488 ORTHO05D005374 3.2e-30 136.0 110 63.6
Pp3c13_16610 Physcomitrium patens HOM05D004488 ORTHO05D005374 4.2e-30 135.6 168 44.0
TPR.G9512 Trifolium pratense HOM05D004488 ORTHO05D005374 1.6e-29 133.7 93 69.9
Cfa005736 Carpinus fangiana HOM05D004488 ORTHO05D005374 2.1e-29 133.3 110 61.8
DCAR_001857 Daucus carota HOM05D004488 ORTHO05D005374 2.1e-29 133.3 102 65.7
Pp3c4_7970 Physcomitrium patens HOM05D004488 ORTHO05D005374 4.6e-29 132.1 165 45.5
SMO361G0358 Selaginella moellendorffii HOM05D004488 ORTHO05D005374 2.3e-28 129.8 125 57.6
CSS0017372 Camellia sinensis var. sinensis HOM05D004488 ORTHO05D005374 3.3e-27 125.9 85 71.8
Haze_10520 Corylus avellana HOM05D004488 ORTHO05D005374 1.6e-26 123.6 100 64.0
Lj9A348T63 Lonicera japonica HOM05D004488 ORTHO05D005374 1.6e-26 123.6 97 61.9
Actinidia28030 Actinidia chinensis HOM05D004488 ORTHO05D005374 3.7e-26 122.5 99 63.6
CDE02G2113 Ceratophyllum demersum HOM05D004488 ORTHO05D005374 3.1e-25 119.4 95 60.0
TPR.G8448 Trifolium pratense HOM05D004488 ORTHO05D005374 2.0e-24 116.7 85 72.9
Mapoly0135s0052 Marchantia polymorpha HOM05D004488 ORTHO05D005374 2.2e-23 113.2 139 46.0
Lj9A348T62 Lonicera japonica HOM05D004488 ORTHO05D005374 2.7e-21 106.3 81 60.5
CDE02G4257 Ceratophyllum demersum HOM05D004488 ORTHO05D005374 8.2e-18 94.7 82 59.8
Haze_10521 Corylus avellana HOM05D004488 ORTHO05D005374 1.4e-17 94.0 68 69.1
CAN.G755.11 Capsicum annuum HOM05D004488 ORTHO05D005374 5.9e-16 88.6 76 59.2
Actinidia30718 Actinidia chinensis HOM05D004488 ORTHO05D005374 1.4e-14 84.0 166 35.5
BraA03t15274Z Brassica rapa HOM05D004488 ORTHO05D005374 3.6e-13 79.3 63 63.5
Cre09.g398845 Chlamydomonas reinhardtii HOM05D004488 ORTHO05D005374 8.8e-12 74.7 125 33.6
Gohir.A11G229600 Gossypium hirsutum HOM05D004488 ORTHO05D005374 9.7e-11 71.2 46 84.8
A03p62120 Brassica napus HOM05D004488 ORTHO05D005374 9.1e-09 64.7 66 48.5
Thhalv10002778m.g Eutrema salsugineum HOM05D004488 ORTHO05D005374 9.1e-09 64.7 42 76.2
SMO361G0062 Selaginella moellendorffii HOM05D004488 ORTHO05D005374 2.0e-08 63.5 96 44.8
Ca_00165_v3 Cicer arietinum L. HOM05D004488 ORTHO05D005374 3.4e-08 62.8 77 48.1
Gohir.A09G038265 Gossypium hirsutum HOM05D003588 ORTHO05D005374 5.0e-07 58.9 46 76.1
Zm00001eb345470 Zea mays HOM05D001942 ORTHO05D008996 2.5e-06 56.6 43 72.1
Glyma.08G067761 Glycine max HOM05D004488 ORTHO05D005374 9.4e-06 54.7 52 55.8


User provided reference genes

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