Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr04g0264231 Lupinus albus HOM05D006182 ORTHO05D007236 2.7e-269 931.4 466 100.0
arahy.Tifrunner.gnm1.ann1.903WAW Arachis hypogaea HOM05D006182 ORTHO05D007236 4.2e-153 545.4 459 64.7
arahy.Tifrunner.gnm1.ann1.I266YZ Arachis hypogaea HOM05D006182 ORTHO05D007236 1.2e-152 543.9 459 64.5
Phvul.011G175100 Phaseolus vulgaris HOM05D006182 ORTHO05D007236 1.1e-150 537.3 455 62.6
Lj3g0019378 Lotus japonicus HOM05D006182 ORTHO05D007236 4.3e-150 535.4 461 62.3
Psat4g135680 Pisum sativum HOM05D006182 ORTHO05D007236 4.5e-147 525.4 465 59.8
CiPaw.15G064200 Carya illinoinensis HOM05D006182 ORTHO05D007236 1.5e-123 447.2 481 50.9
Prupe.1G390200 Prunus persica HOM05D006182 ORTHO05D007236 5.3e-116 422.2 474 51.1
Potri.002G129000 Populus trichocarpa HOM05D006182 ORTHO05D007236 2.6e-115 419.9 464 48.3
Haze_17575 Corylus avellana HOM05D006182 ORTHO05D007236 3.4e-115 419.5 450 53.3
Cfa018501 Carpinus fangiana HOM05D006182 ORTHO05D007236 1.1e-113 414.5 470 50.4
Manes.05G170000 Manihot esculenta HOM05D006182 ORTHO05D007236 2.5e-113 413.3 479 47.8
RcHm_v2.0_Chr7g0224651 Rosa chinensis HOM05D006182 ORTHO05D007236 6.3e-109 398.7 470 47.7
MD08G1060500 Malus domestica HOM05D006182 ORTHO05D007236 1.2e-107 394.4 466 46.8
Dinv35991 Davidia involucrata HOM05D006182 ORTHO05D007236 1.6e-107 394.0 482 46.9
Actinidia22605 Actinidia chinensis HOM05D006182 ORTHO05D007236 2.6e-107 393.3 465 47.5
Rhsim06G0045000 Rhododendron simsii HOM05D006182 ORTHO05D007236 2.6e-107 393.3 466 48.3
Thecc.08G014800 Theobroma cacao HOM05D006182 ORTHO05D007236 5.9e-107 392.1 465 49.2
FvH4_5g30300 Fragaria vesca HOM05D006182 ORTHO05D007236 5.0e-106 389.0 477 46.3
vmacro21568 Vaccinium macrocarpon HOM05D006182 ORTHO05D007236 1.1e-105 387.9 466 48.7
QL02p006174 Quercus lobata HOM05D006182 ORTHO05D007236 1.9e-105 387.1 477 49.3
TPR.G9412 Trifolium pratense HOM05D006182 ORTHO05D007236 5.5e-105 385.6 290 67.9
FAN08G0368 Fragaria x ananassa HOM05D006182 ORTHO05D007236 9.4e-105 384.8 484 45.9
CsaV3_4G034020 Cucumis sativus L. HOM05D006182 ORTHO05D007236 1.6e-104 384.0 480 46.2
Atru.chr13.613 Acer truncatum HOM05D006182 ORTHO05D007236 4.7e-104 382.5 471 45.2
Sed0017871 Sechium edule HOM05D006182 ORTHO05D007236 6.1e-104 382.1 425 49.9
MSTRG.25113 Avicennia marina HOM05D006182 ORTHO05D007236 1.0e-103 381.3 468 44.2
Hma1.2p1_0951F.1_g240770 Hydrangea macrophylla HOM05D006182 ORTHO05D007236 1.3e-101 374.4 474 46.4
TWI56G0571 Tripterygium wilfordii HOM05D006182 ORTHO05D007236 2.2e-101 373.6 466 48.1
CANSAT64G1322 Cannabis sativa HOM05D006182 ORTHO05D007236 3.1e-100 369.8 480 44.4
Duzib093G2194 Durio zibethinus HOM05D006182 ORTHO05D007236 5.3e-100 369.0 472 45.8
CAN.G210.12 Capsicum annuum HOM05D006182 ORTHO05D007236 7.0e-100 368.6 450 43.6
SGA_v2.0_scaffold217G42430 Striga asiatica HOM05D006182 ORTHO05D007236 1.6e-99 367.5 474 43.7
PGR031G1311 Punica granatum HOM05D006182 ORTHO05D007236 1.7e-98 364.0 464 43.8
PGSC0003DMG400031482 Solanum tuberosum HOM05D006182 ORTHO05D007236 5.0e-98 362.5 452 44.5
Nn6g32369 Nelumbo nucifera HOM05D006182 ORTHO05D007236 7.2e-97 358.6 498 43.4
DCAR_012766 Daucus carota HOM05D006182 ORTHO05D007236 1.0e-95 354.8 474 43.2
Cc00_g16120 Coffea canephora HOM05D006182 ORTHO05D007236 1.4e-95 354.4 469 42.9
Aqoxy2G01750 Aquilegia oxysepala HOM05D006182 ORTHO05D007236 5.2e-95 352.4 473 42.1
Lj4A50G37 Lonicera japonica HOM05D006182 ORTHO05D007236 4.4e-94 349.4 468 42.9
Sopen07g009980 Solanum pennellii HOM05D006182 ORTHO05D007236 4.4e-94 349.4 456 42.3
FAN18G2601 Fragaria x ananassa HOM05D006182 ORTHO05D007236 5.7e-94 349.0 498 43.2
Peaxi162Scf00929g00711 Petunia axillaris HOM05D006182 ORTHO05D007236 1.3e-93 347.8 450 43.1
ClCG05G019560 Citrullus lanatus HOM05D006182 ORTHO05D007236 1.7e-93 347.4 462 44.8
Sabra02G0101100 Salix brachista HOM05D006182 ORTHO05D007236 8.3e-93 345.1 413 45.8
Hund17608 Selenicereus undatus HOM05D006182 ORTHO05D007236 2.4e-92 343.6 462 42.0
MELO3C032401.2 Cucumis melo HOM05D006182 ORTHO05D007236 1.6e-91 340.9 480 42.9
Gorai.009G018100 Gossypium raimondii HOM05D006182 ORTHO05D007236 3.5e-91 339.7 477 42.3
Cpa.g.c37201 Carica papaya HOM05D006182 ORTHO05D007236 5.9e-91 339.0 412 44.4
Gohir.A05G016750 Gossypium hirsutum HOM05D006182 ORTHO05D007236 1.7e-90 337.4 477 42.3
Carub.0006s2813 Capsella rubella HOM05D006182 ORTHO05D007236 2.2e-90 337.0 456 41.0
Gohir.D05G017700 Gossypium hirsutum HOM05D006182 ORTHO05D007236 2.9e-90 336.7 477 42.1
HanXRQChr09g0268131 Helianthus annuus HOM05D006182 ORTHO05D007236 5.0e-90 335.9 466 43.3
Nitab4.5_0003237g0020 Nicotiana tabacum HOM05D006182 ORTHO05D007236 2.1e-88 330.5 451 41.9
ECA232G1194 Erigeron canadensis HOM05D006182 ORTHO05D007236 1.0e-87 328.2 487 41.7
unitig_8.g5014 Utricularia gibba HOM05D006182 ORTHO05D007236 1.0e-87 328.2 470 39.8
Solyc07g021120.3 Solanum lycopersicum HOM05D006182 ORTHO05D007236 2.3e-87 327.0 456 40.6
Lsat_1_v5_gn_4_124380 Lactuca sativa HOM05D006182 ORTHO05D007236 3.0e-87 326.6 463 39.5
Sc15g0006460 Simmondsia chinensis HOM05D006182 ORTHO05D007236 1.2e-86 324.7 442 42.1
MBI16_g27588_MAGBIO Magnolia biondii HOM05D006182 ORTHO05D007236 1.5e-86 324.3 476 40.3
AL6G43320 Arabidopsis lyrata HOM05D006182 ORTHO05D007236 1.3e-85 321.2 458 42.1
Aa31LG9G14980 Aethionema arabicum HOM05D006182 ORTHO05D007236 2.8e-85 320.1 460 40.4
Nitab4.5_0001611g0150 Nicotiana tabacum HOM05D006182 ORTHO05D007236 2.8e-85 320.1 493 39.8
EL10Ac1g01812 Beta vulgaris HOM05D006182 ORTHO05D007236 1.1e-84 318.2 466 38.6
THA.LOC104816122 Tarenaya hassleriana HOM05D006182 ORTHO05D007236 4.1e-84 316.2 462 39.8
BcaB01g01419 Brassica carinata HOM05D006182 ORTHO05D007236 7.0e-84 315.5 458 41.7
AT4G09680 Arabidopsis thaliana HOM05D006182 ORTHO05D007236 9.2e-84 315.1 455 39.3
Thhalv10029299m.g Eutrema salsugineum HOM05D006182 ORTHO05D007236 1.6e-83 314.3 455 41.3
BcaC04g20947 Brassica carinata HOM05D006182 ORTHO05D007236 3.5e-83 313.2 463 41.7
A09p29430 Brassica napus HOM05D006182 ORTHO05D007236 3.5e-83 313.2 459 41.4
C09p37620 Brassica napus HOM05D006182 ORTHO05D007236 3.5e-83 313.2 463 41.7
BraA09t38510Z Brassica rapa HOM05D006182 ORTHO05D007236 8.6e-82 308.5 467 40.5
BolC9t56593H Brassica oleracea HOM05D006182 ORTHO05D007236 1.9e-81 307.4 467 41.3
SalBow7G1322 Salvia bowleyana HOM05D006182 ORTHO05D007236 7.3e-81 305.4 468 39.7
Sp6g07920 Schrenkiella parvula HOM05D006182 ORTHO05D007236 1.2e-80 304.7 403 43.7
AUR62031379 Chenopodium quinoa HOM05D006182 ORTHO05D007236 1.0e-79 301.6 360 45.3
FAN10G2690 Fragaria x ananassa HOM05D006182 ORTHO05D007236 1.8e-79 300.8 309 51.8
PSO541G3468 Papaver somniferum HOM05D006182 ORTHO05D007236 2.6e-78 297.0 477 39.8
PSO675G0403 Papaver somniferum HOM05D006182 ORTHO05D007236 5.4e-76 289.3 477 39.4
Oeu032242.1 Olea europaea HOM05D006182 ORTHO05D007236 3.5e-75 286.6 295 50.2
Ah.05g168900 Amaranthus hybridus HOM05D006182 ORTHO05D007236 1.6e-72 277.7 438 38.1
Ciclev10003565m.g Citrus clementina HOM05D006182 ORTHO05D007236 1.7e-69 267.7 380 39.5
ATR0225G007 Amborella trichopoda HOM05D006182 ORTHO05D007236 4.9e-69 266.2 474 38.4
FAN19G3122 Fragaria x ananassa HOM05D006182 ORTHO05D007236 3.5e-67 260.0 278 50.0
TWI36G0305 Tripterygium wilfordii HOM05D006182 ORTHO05D007236 1.5e-65 254.6 411 39.4
Migut.C00612 Erythranthe guttata HOM05D006182 ORTHO05D007236 3.6e-64 250.0 370 39.2
Os09g0376000 Oryza sativa ssp. japonica HOM05D006182 ORTHO05D007236 1.1e-63 248.4 462 33.3
Sopen12g025610 Solanum pennellii HOM05D006182 ORTHO05D007236 6.4e-61 239.2 454 33.9
FAN16G1533 Fragaria x ananassa HOM05D006182 ORTHO05D007236 8.3e-61 238.8 309 45.0
Hma1.2p1_2764F.1_g328150 Hydrangea macrophylla HOM05D006182 ORTHO05D007236 2.1e-59 234.2 309 44.0
Solyc12g062480.3 Solanum lycopersicum HOM05D006182 ORTHO05D007236 1.3e-58 231.5 220 50.5
Zm00001eb311480 Zea mays HOM05D006182 ORTHO05D007236 1.9e-57 227.6 477 31.0
FAN17G1630 Fragaria x ananassa HOM05D006182 ORTHO05D007236 7.3e-57 225.7 262 47.7
Eucgr.F02378 Eucalyptus grandis HOM05D006182 ORTHO05D007236 2.2e-53 214.2 376 38.0
FAN19G0764 Fragaria x ananassa HOM05D006182 ORTHO05D007236 8.7e-42 175.6 214 46.7
HPP92_010557 Vanilla planifolia HOM05D006182 ORTHO05D007236 2.8e-40 170.6 419 32.0
SEGI_31096 Sequoiadendron giganteum HOM05D006182 ORTHO05D007236 4.0e-31 140.2 138 44.9
Mapoly0037s0065 Marchantia polymorpha HOM05D006182 ORTHO05D007236 1.1e-25 122.1 355 25.6
Pp3c12_3560 Physcomitrium patens HOM05D006182 ORTHO05D007236 1.1e-23 115.5 328 29.0
GSVIVG01009572001 Vitis vinifera HOM05D006182 ORTHO05D007236 4.9e-21 106.7 74 68.9
COL.COLO4_26443 Corchorus olitorius HOM05D006182 ORTHO05D007236 2.5e-20 104.4 65 72.3
SMO356G0287 Selaginella moellendorffii HOM05D006182 ORTHO05D007236 3.0e-18 97.4 390 24.4
Dinv00354 Davidia involucrata HOM05D006182 ORTHO05D007236 5.1e-18 96.7 56 76.8
VMungo1127G0903 Vigna mungo HOM05D006182 ORTHO05D007236 2.4e-15 87.8 107 48.6
Dinv35387 Davidia involucrata HOM05D013161 ORTHO05D007236 9.0e-15 85.9 51 74.5
Glyma.08G236800 Glycine max HOM05D006182 ORTHO05D007236 1.3e-10 72.0 42 83.3


User provided reference genes

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