Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr04g0264191 Lupinus albus HOM05D006182 ORTHO05D007236 2.1e-244 848.6 426 100.0
Lj3g0019378 Lotus japonicus HOM05D006182 ORTHO05D007236 2.0e-141 506.5 406 66.5
Glyma.08G236800 Glycine max HOM05D006182 ORTHO05D007236 5.2e-134 481.9 403 64.0
Psat4g135680 Pisum sativum HOM05D006182 ORTHO05D007236 2.9e-129 466.1 406 63.5
Phvul.011G175100 Phaseolus vulgaris HOM05D006182 ORTHO05D007236 4.8e-124 448.7 409 60.1
TPR.G9412 Trifolium pratense HOM05D006182 ORTHO05D007236 4.5e-122 442.2 407 60.2
arahy.Tifrunner.gnm1.ann1.I266YZ Arachis hypogaea HOM05D006182 ORTHO05D007236 1.5e-109 400.6 405 56.5
arahy.Tifrunner.gnm1.ann1.903WAW Arachis hypogaea HOM05D006182 ORTHO05D007236 1.7e-108 397.1 405 56.3
Dinv35991 Davidia involucrata HOM05D006182 ORTHO05D007236 7.4e-64 248.8 402 42.0
CiPaw.15G064200 Carya illinoinensis HOM05D006182 ORTHO05D007236 6.2e-55 219.2 403 38.0
Ciclev10003312m.g Citrus clementina HOM05D006182 ORTHO05D007236 1.4e-54 218.0 424 36.8
Cfa018501 Carpinus fangiana HOM05D006182 ORTHO05D007236 4.0e-54 216.5 408 37.7
QL02p006174 Quercus lobata HOM05D006182 ORTHO05D007236 7.6e-53 212.2 406 38.7
Atru.chr13.613 Acer truncatum HOM05D006182 ORTHO05D007236 3.8e-52 209.9 404 36.4
Prupe.1G390200 Prunus persica HOM05D006182 ORTHO05D007236 4.9e-52 209.5 406 36.5
vmacro21568 Vaccinium macrocarpon HOM05D006182 ORTHO05D007236 1.6e-50 204.5 417 36.9
FAN08G0368 Fragaria x ananassa HOM05D006182 ORTHO05D007236 3.5e-50 203.4 407 35.9
CANSAT64G1322 Cannabis sativa HOM05D006182 ORTHO05D007236 1.1e-48 198.4 402 36.8
FAN18G2601 Fragaria x ananassa HOM05D006182 ORTHO05D007236 1.1e-48 198.4 407 35.6
Haze_17575 Corylus avellana HOM05D006182 ORTHO05D007236 3.3e-48 196.8 407 36.1
Rhsim06G0045000 Rhododendron simsii HOM05D006182 ORTHO05D007236 3.3e-48 196.8 410 35.4
RcHm_v2.0_Chr7g0224651 Rosa chinensis HOM05D006182 ORTHO05D007236 5.7e-48 196.1 401 36.4
Manes.05G170000 Manihot esculenta HOM05D006182 ORTHO05D007236 9.7e-48 195.3 400 36.2
MD08G1060500 Malus domestica HOM05D006182 ORTHO05D007236 1.3e-47 194.9 409 35.9
Potri.002G129000 Populus trichocarpa HOM05D006182 ORTHO05D007236 1.8e-46 191.0 409 35.5
Actinidia22605 Actinidia chinensis HOM05D006182 ORTHO05D007236 3.1e-46 190.3 409 32.5
VMungo1127G0903 Vigna mungo HOM05D006182 ORTHO05D007236 2.0e-45 187.6 363 37.2
FvH4_5g30300 Fragaria vesca HOM05D006182 ORTHO05D007236 3.4e-45 186.8 407 34.6
COL.COLO4_26443 Corchorus olitorius HOM05D006182 ORTHO05D007236 3.8e-44 183.3 411 35.8
Sabra02G0101100 Salix brachista HOM05D006182 ORTHO05D007236 5.5e-43 179.5 406 34.2
Cpa.g.sc376.1 Carica papaya HOM05D006182 ORTHO05D007236 2.1e-42 177.6 406 33.3
Thecc.08G014800 Theobroma cacao HOM05D006182 ORTHO05D007236 1.1e-40 171.8 417 33.8
CsaV3_4G034020 Cucumis sativus L. HOM05D006182 ORTHO05D007236 5.7e-40 169.5 410 33.9
ClCG05G019560 Citrullus lanatus HOM05D006182 ORTHO05D007236 7.4e-40 169.1 404 32.2
Nn6g32369 Nelumbo nucifera HOM05D006182 ORTHO05D007236 6.3e-39 166.0 414 31.4
Sed0017871 Sechium edule HOM05D006182 ORTHO05D007236 1.1e-38 165.2 416 30.8
TWI56G0571 Tripterygium wilfordii HOM05D006182 ORTHO05D007236 3.1e-38 163.7 413 31.7
Duzib093G2194 Durio zibethinus HOM05D006182 ORTHO05D007236 1.0e-36 158.7 410 33.7
Hma1.2p1_0951F.1_g240770 Hydrangea macrophylla HOM05D006182 ORTHO05D007236 1.7e-36 157.9 407 33.2
Gohir.A05G016750 Gossypium hirsutum HOM05D006182 ORTHO05D007236 2.2e-36 157.5 408 32.6
Gohir.D05G017700 Gossypium hirsutum HOM05D006182 ORTHO05D007236 2.9e-36 157.1 408 32.4
PGR031G1311 Punica granatum HOM05D006182 ORTHO05D007236 6.5e-36 156.0 404 34.2
Aqoxy2G01750 Aquilegia oxysepala HOM05D006182 ORTHO05D007236 1.4e-35 154.8 418 29.7
Gorai.009G018100 Gossypium raimondii HOM05D006182 ORTHO05D007236 7.2e-35 152.5 405 31.9
Cc00_g16120 Coffea canephora HOM05D006182 ORTHO05D007236 1.2e-34 151.8 410 30.7
MELO3C032401.2 Cucumis melo HOM05D006182 ORTHO05D007236 2.1e-34 151.0 407 31.7
CAN.G210.12 Capsicum annuum HOM05D006182 ORTHO05D007236 3.6e-34 150.2 405 30.6
Nitab4.5_0001611g0150 Nicotiana tabacum HOM05D006182 ORTHO05D007236 1.0e-33 148.7 414 31.9
Peaxi162Scf00929g00711 Petunia axillaris HOM05D006182 ORTHO05D007236 2.6e-32 144.1 403 31.5
Nitab4.5_0003237g0020 Nicotiana tabacum HOM05D006182 ORTHO05D007236 9.7e-32 142.1 421 31.8
PSO541G3468 Papaver somniferum HOM05D006182 ORTHO05D007236 8.2e-31 139.0 407 30.0
PGSC0003DMG400031482 Solanum tuberosum HOM05D006182 ORTHO05D007236 8.2e-31 139.0 408 30.9
Oeu033637.2 Olea europaea HOM05D006182 ORTHO05D007236 1.8e-30 137.9 413 30.3
MBI16_g27588_MAGBIO Magnolia biondii HOM05D006182 ORTHO05D007236 2.6e-29 134.0 406 31.0
MSTRG.25113 Avicennia marina HOM05D006182 ORTHO05D007236 1.5e-27 128.3 403 28.8
DCAR_012766 Daucus carota HOM05D006182 ORTHO05D007236 1.5e-27 128.3 415 30.8
BraA09t38510Z Brassica rapa HOM05D006182 ORTHO05D007236 4.2e-27 126.7 307 32.9
Solyc12g062480.3 Solanum lycopersicum HOM05D006182 ORTHO05D007236 7.2e-27 125.9 409 29.3
Sopen07g009980 Solanum pennellii HOM05D006182 ORTHO05D007236 9.4e-27 125.6 409 29.3
Sopen12g025610 Solanum pennellii HOM05D006182 ORTHO05D007236 1.2e-26 125.2 409 29.3
AL6G43320 Arabidopsis lyrata HOM05D006182 ORTHO05D007236 2.7e-26 124.0 311 31.5
A09p29430 Brassica napus HOM05D006182 ORTHO05D007236 8.0e-26 122.5 307 32.6
AT4G09680 Arabidopsis thaliana HOM05D006182 ORTHO05D007236 1.4e-25 121.7 302 31.8
Hund17608 Selenicereus undatus HOM05D006182 ORTHO05D007236 2.3e-25 120.9 400 27.2
THA.LOC104816122 Tarenaya hassleriana HOM05D006182 ORTHO05D007236 3.0e-25 120.6 322 31.7
BcaC04g20947 Brassica carinata HOM05D006182 ORTHO05D007236 6.7e-25 119.4 316 31.6
C09p37620 Brassica napus HOM05D006182 ORTHO05D007236 6.7e-25 119.4 316 31.6
BolC9t56593H Brassica oleracea HOM05D006182 ORTHO05D007236 6.7e-25 119.4 316 31.6
BcaB01g01419 Brassica carinata HOM05D006182 ORTHO05D007236 1.1e-24 118.6 408 28.9
Carub.0006s2813 Capsella rubella HOM05D006182 ORTHO05D007236 1.5e-24 118.2 308 30.2
Aa31LG9G14980 Aethionema arabicum HOM05D006182 ORTHO05D007236 2.6e-24 117.5 298 32.2
Sc15g0006450 Simmondsia chinensis HOM05D006182 ORTHO05D007236 5.7e-24 116.3 422 26.3
Thhalv10029299m.g Eutrema salsugineum HOM05D006182 ORTHO05D007236 2.2e-23 114.4 395 28.1
Lj4A50G37 Lonicera japonica HOM05D006182 ORTHO05D007236 8.2e-23 112.5 402 28.1
ECA232G1194 Erigeron canadensis HOM05D006182 ORTHO05D007236 1.8e-22 111.3 406 27.6
CARHR260630 Cardamine hirsuta HOM05D006182 ORTHO05D007236 3.1e-22 110.5 314 29.3
SalBow7G1322 Salvia bowleyana HOM05D006182 ORTHO05D007236 2.6e-21 107.5 417 29.3
Ah.05g168900 Amaranthus hybridus HOM05D006182 ORTHO05D007236 7.7e-21 105.9 308 29.9
ATR0225G007 Amborella trichopoda HOM05D006182 ORTHO05D007236 2.9e-20 104.0 426 26.5
SGA_v2.0_scaffold217G42430 Striga asiatica HOM05D006182 ORTHO05D007236 6.5e-20 102.8 402 28.1
Sp6g07920 Schrenkiella parvula HOM05D006182 ORTHO05D007236 8.5e-20 102.4 400 27.2
EL10Ac1g01812 Beta vulgaris HOM05D006182 ORTHO05D007236 1.5e-19 101.7 429 27.5
HanXRQChr09g0268131 Helianthus annuus HOM05D006182 ORTHO05D007236 5.5e-19 99.8 309 26.5
Migut.C00612 Erythranthe guttata HOM05D006182 ORTHO05D007236 1.2e-18 98.6 397 28.5
Solyc07g021120.3 Solanum lycopersicum HOM05D006182 ORTHO05D007236 8.8e-17 92.4 393 27.5
Lsat_1_v5_gn_4_124380 Lactuca sativa HOM05D006182 ORTHO05D007236 1.2e-16 92.0 263 28.1
PSO675G0403 Papaver somniferum HOM05D006182 ORTHO05D007236 1.0e-12 79.0 169 30.2
AUR62031379 Chenopodium quinoa HOM05D006182 ORTHO05D007236 6.5e-12 76.3 410 25.6
CDE02G1449 Ceratophyllum demersum HOM05D006182 ORTHO05D007236 4.7e-10 70.1 267 27.7
SEGI_08955 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 8.0e-10 69.3 373 24.4
Zm00001eb311480 Zea mays HOM05D006182 ORTHO05D007236 2.8e-07 60.8 259 22.0


User provided reference genes

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