Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr04g0264111 Lupinus albus HOM05D001231 ORTHO05D001012 8.9e-29 129.4 58 100.0
Glyma.16G100400 Glycine max HOM05D001231 ORTHO05D001012 4.6e-09 63.9 56 53.6
Lj4g0025743 Lotus japonicus HOM05D001231 ORTHO05D001012 4.6e-09 63.9 56 55.4
Phvul.003G282500 Phaseolus vulgaris HOM05D001231 ORTHO05D001012 1.0e-08 62.8 56 53.6
Medtr8g070770 Medicago truncatula HOM05D001231 ORTHO05D001012 1.3e-08 62.4 55 52.7
Lalb_Chr05g0229081 Lupinus albus HOM05D001231 ORTHO05D001012 5.1e-08 60.5 56 51.8
Glyma.08G268000 Glycine max HOM05D001231 ORTHO05D001012 8.6e-08 59.7 53 54.7
Medtr8g070790 Medicago truncatula HOM05D001231 ORTHO05D001012 1.9e-07 58.5 56 50.0
Os03g0130300 Oryza sativa ssp. japonica HOM05D001231 ORTHO05D001012 2.5e-07 58.2 56 50.0
Psat4g112000 Pisum sativum HOM05D001231 ORTHO05D001012 2.5e-07 58.2 55 50.9
arahy.Tifrunner.gnm1.ann1.IDU4K1 Arachis hypogaea HOM05D001231 ORTHO05D001012 3.3e-07 57.8 56 50.0
Manes.18G077618 Manihot esculenta HOM05D001231 ORTHO05D001012 3.3e-07 57.8 56 50.0
Dinv00224 Davidia involucrata HOM05D001231 ORTHO05D001012 4.3e-07 57.4 56 53.6
Prupe.1G341500 Prunus persica HOM05D001231 ORTHO05D001012 4.3e-07 57.4 56 53.6
Solyc07g007730.4 Solanum lycopersicum HOM05D001231 ORTHO05D001012 5.6e-07 57.0 56 50.0
Sopen07g001060 Solanum pennellii HOM05D001231 ORTHO05D001012 5.6e-07 57.0 56 50.0
arahy.Tifrunner.gnm1.ann1.IS2QLD Arachis hypogaea HOM05D001231 ORTHO05D001012 7.3e-07 56.6 53 52.8
Oeu059528.1 Olea europaea HOM05D001231 ORTHO05D001012 7.3e-07 56.6 55 52.7
Nn3g18726 Nelumbo nucifera HOM05D001231 ORTHO05D001012 1.2e-06 55.8 56 53.6
Atru.chr11.1065 Acer truncatum HOM05D001231 ORTHO05D001012 1.6e-06 55.5 52 53.8
MD13G1012400 Malus domestica HOM05D001231 ORTHO05D001012 1.6e-06 55.5 56 51.8
GSVIVG01010274001 Vitis vinifera HOM05D001231 ORTHO05D001012 1.6e-06 55.5 56 53.6
Nitab4.5_0007878g0020 Nicotiana tabacum HOM05D001231 ORTHO05D001012 2.1e-06 55.1 56 48.2
Peaxi162Scf00088g00119 Petunia axillaris HOM05D001231 ORTHO05D001012 2.1e-06 55.1 56 48.2
SalBow2G2204 Salvia bowleyana HOM05D001231 ORTHO05D001012 2.1e-06 55.1 52 51.9
Thecc.02G298100 Theobroma cacao HOM05D001231 ORTHO05D001012 2.1e-06 55.1 56 51.8
PGSC0003DMG400015130 Solanum tuberosum HOM05D001231 ORTHO05D001012 2.8e-06 54.7 56 46.4
TPR.G19837 Trifolium pratense HOM05D001231 ORTHO05D001012 2.8e-06 54.7 51 51.0
HanXRQChr12g0365821 Helianthus annuus HOM05D001231 ORTHO05D001012 3.6e-06 54.3 56 48.2
MD02G1301100 Malus domestica HOM05D001231 ORTHO05D001012 3.6e-06 54.3 56 50.0
Solyc07g007755.1 Solanum lycopersicum HOM05D001231 ORTHO05D001012 3.6e-06 54.3 56 46.4
QL03p041430 Quercus lobata HOM05D001231 ORTHO05D001012 4.7e-06 53.9 56 51.8
PGSC0003DMG400030677 Solanum tuberosum HOM05D001231 ORTHO05D001012 4.7e-06 53.9 56 48.2
Cc11_g07160 Coffea canephora HOM05D001231 ORTHO05D001012 6.2e-06 53.5 56 50.0
Oeu059529.1 Olea europaea HOM05D001231 ORTHO05D001012 6.2e-06 53.5 55 50.9
PGSC0003DMG400015132 Solanum tuberosum HOM05D001231 ORTHO05D001012 6.2e-06 53.5 52 48.1
Atru.chr11.1068 Acer truncatum HOM05D001231 ORTHO05D001012 8.1e-06 53.1 52 51.9
Cpa.g.sc2.96 Carica papaya HOM05D001231 ORTHO05D001012 8.1e-06 53.1 53 49.1
Hma1.2p1_0383F.1_g140490 Hydrangea macrophylla HOM05D001231 ORTHO05D001012 8.1e-06 53.1 53 49.1
Manes.02G163900 Manihot esculenta HOM05D001231 ORTHO05D001012 8.1e-06 53.1 56 50.0


User provided reference genes

Program Settings