Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr04g0258981 Lupinus albus HOM05D007869 ORTHO05D009962 3.0e-190 668.3 333 100.0
Lalb_Chr17g0337801 Lupinus albus HOM05D007869 ORTHO05D009962 2.6e-149 532.3 334 79.3
Glyma.09G283900 Glycine max HOM05D007869 ORTHO05D009962 2.8e-135 485.7 324 76.2
Glyma.20G001800 Glycine max HOM05D007869 ORTHO05D009962 1.1e-134 483.8 318 77.0
VMungo0251G2255 Vigna mungo HOM05D007869 ORTHO05D009962 2.6e-133 479.2 323 74.0
Phvul.003G003700 Phaseolus vulgaris HOM05D007869 ORTHO05D009962 2.1e-130 469.5 324 74.1
Medtr1g038260 Medicago truncatula HOM05D007869 ORTHO05D009962 1.4e-126 456.8 320 73.1
Lj2g0022280 Lotus japonicus HOM05D007869 ORTHO05D009962 1.2e-125 453.8 330 71.8
TPR.G29782 Trifolium pratense HOM05D007869 ORTHO05D009962 1.1e-123 447.2 323 71.2
Psat6g099760 Pisum sativum HOM05D007869 ORTHO05D009962 2.7e-114 416.0 302 70.9
Prupe.2G203300 Prunus persica HOM05D007869 ORTHO05D009962 1.1e-107 394.0 302 64.2
Atru.chr5.803 Acer truncatum HOM05D007869 ORTHO05D009962 3.9e-105 385.6 311 60.5
RcHm_v2.0_Chr1g0361741 Rosa chinensis HOM05D007869 ORTHO05D009962 3.3e-104 382.5 306 64.1
CANSAT56G0171 Cannabis sativa HOM05D007869 ORTHO05D009962 5.7e-104 381.7 292 63.4
CiPaw.02G045900 Carya illinoinensis HOM05D007869 ORTHO05D009962 1.4e-102 377.1 280 66.1
Cfa003717 Carpinus fangiana HOM05D007869 ORTHO05D009962 2.0e-101 373.2 299 61.9
Duzib138G0629 Durio zibethinus HOM05D007869 ORTHO05D009962 4.5e-101 372.1 305 59.3
Haze_15765 Corylus avellana HOM05D007869 ORTHO05D009962 1.0e-100 370.9 299 61.2
Ciclev10021277m.g Citrus clementina HOM05D007869 ORTHO05D009962 2.9e-100 369.4 289 62.6
FAN10G0101 Fragaria x ananassa HOM05D007869 ORTHO05D009962 1.9e-99 366.7 305 61.0
Thecc.01G330400 Theobroma cacao HOM05D007869 ORTHO05D009962 3.2e-99 365.9 302 59.6
FAN06G2096 Fragaria x ananassa HOM05D007869 ORTHO05D009962 9.4e-99 364.4 305 60.7
Potri.014G108300 Populus trichocarpa HOM05D007869 ORTHO05D009962 1.4e-97 360.5 290 59.3
FAN06G3475 Fragaria x ananassa HOM05D007869 ORTHO05D009962 3.0e-97 359.4 287 62.4
Manes.05G005500 Manihot esculenta HOM05D007869 ORTHO05D009962 1.1e-96 357.5 297 56.9
FAN03G1443 Fragaria x ananassa HOM05D007869 ORTHO05D009962 2.6e-96 356.3 305 59.7
FAN03G2169 Fragaria x ananassa HOM05D007869 ORTHO05D009962 2.6e-96 356.3 305 59.7
Sabra02G0132700 Salix brachista HOM05D007869 ORTHO05D009962 3.7e-95 352.4 313 56.2
Sabra14G0079800 Salix brachista HOM05D007869 ORTHO05D009962 6.3e-95 351.7 291 58.4
TAR374G1227 Trochodendron aralioides HOM05D007869 ORTHO05D009962 8.2e-95 351.3 302 56.3
TWI14G0946 Tripterygium wilfordii HOM05D007869 ORTHO05D009962 3.1e-94 349.4 295 58.3
Medtr1g038290 Medicago truncatula HOM05D007869 ORTHO05D009962 1.0e-92 344.4 314 60.5
Cpa.g.sc57.67 Carica papaya HOM05D007869 ORTHO05D009962 6.5e-92 341.7 318 55.0
COL.COLO4_23074 Corchorus olitorius HOM05D007869 ORTHO05D009962 1.2e-90 337.4 298 56.4
Nn3g18755 Nelumbo nucifera HOM05D007869 ORTHO05D009962 1.2e-88 330.9 319 53.6
arahy.Tifrunner.gnm1.ann1.WBP5Q2 Arachis hypogaea HOM05D007869 ORTHO05D009962 9.7e-88 327.8 312 54.8
CsaV3_6G008420 Cucumis sativus L. HOM05D007869 ORTHO05D009962 9.7e-88 327.8 279 58.1
ClCG06G002380 Citrullus lanatus HOM05D007869 ORTHO05D009962 1.8e-86 323.6 280 57.9
arahy.Tifrunner.gnm1.ann1.2P25JP Arachis hypogaea HOM05D007869 ORTHO05D009962 4.1e-86 322.4 287 57.5
Sc01g0002100 Simmondsia chinensis HOM05D007869 ORTHO05D009962 1.9e-83 313.5 316 51.3
CARHR001570 Cardamine hirsuta HOM05D007869 ORTHO05D009962 3.2e-83 312.8 290 54.5
Sp1g01350 Schrenkiella parvula HOM05D007869 ORTHO05D009962 2.1e-82 310.1 291 55.0
FAN01G2503 Fragaria x ananassa HOM05D007869 ORTHO05D009962 2.7e-82 309.7 255 59.6
FAN10G1242 Fragaria x ananassa HOM05D007869 ORTHO05D009962 6.1e-82 308.5 252 61.1
Thhalv10009953m.g Eutrema salsugineum HOM05D007869 ORTHO05D009962 1.0e-81 307.8 290 54.1
BraA10t42381Z Brassica rapa HOM05D007869 ORTHO05D009962 4.0e-81 305.8 292 52.7
BolC5t28887H Brassica oleracea HOM05D007869 ORTHO05D009962 8.8e-81 304.7 291 52.6
A10p01030 Brassica napus HOM05D007869 ORTHO05D009962 1.5e-80 303.9 284 52.8
THA.LOC104825914 Tarenaya hassleriana HOM05D007869 ORTHO05D009962 2.0e-80 303.5 283 54.8
C05p01060 Brassica napus HOM05D007869 ORTHO05D009962 4.4e-80 302.4 291 51.9
BcaC05g24607 Brassica carinata HOM05D007869 ORTHO05D009962 1.4e-78 297.4 284 52.1
Carub.0001s0129 Capsella rubella HOM05D007869 ORTHO05D009962 3.5e-77 292.7 296 50.7
MELO3C022297.2 Cucumis melo HOM05D007869 ORTHO05D009962 5.0e-76 288.9 287 51.6
Aa31LG1G10230 Aethionema arabicum HOM05D007869 ORTHO05D009962 4.2e-75 285.8 295 50.2
EL10Ac1g00161 Beta vulgaris HOM05D007869 ORTHO05D009962 7.2e-75 285.0 284 51.4
Sed0016589 Sechium edule HOM05D007869 ORTHO05D009962 9.5e-75 284.6 281 52.3
MBI04_g38990_MAGBIO Magnolia biondii HOM05D007869 ORTHO05D009962 1.2e-74 284.3 279 54.1
AT2G41610 Arabidopsis thaliana HOM05D007869 ORTHO05D009962 1.8e-73 280.4 280 52.1
FvH4_7g18090 Fragaria vesca HOM05D007869 ORTHO05D009962 3.0e-73 279.6 227 64.8
AUR62023523 Chenopodium quinoa HOM05D007869 ORTHO05D009962 1.5e-72 277.3 299 48.8
Ah.05g178800 Amaranthus hybridus HOM05D007869 ORTHO05D009962 5.7e-72 275.4 283 50.9
Actinidia28076 Actinidia chinensis HOM05D007869 ORTHO05D009962 7.5e-72 275.0 209 64.1
AUR62004577 Chenopodium quinoa HOM05D007869 ORTHO05D009962 1.7e-71 273.9 299 48.5
CSS0017560 Camellia sinensis var. sinensis HOM05D007869 ORTHO05D009962 1.8e-70 270.4 216 62.5
AL4G39680 Arabidopsis lyrata HOM05D007869 ORTHO05D009962 2.4e-70 270.0 284 50.0
PSO384G3553 Papaver somniferum HOM05D007869 ORTHO05D009962 1.6e-69 267.3 337 46.6
ATR0579G134 Amborella trichopoda HOM05D007869 ORTHO05D009962 8.0e-66 255.0 324 44.8
PSO135G1025 Papaver somniferum HOM05D007869 ORTHO05D009962 1.4e-65 254.2 327 45.6
Lju170C22T1 Lonicera japonica HOM05D007869 ORTHO05D009962 5.4e-62 242.3 218 56.4
HPP92_007374 Vanilla planifolia HOM05D007869 ORTHO05D009962 5.4e-62 242.3 286 45.5
Gorai.004G148700 Gossypium raimondii HOM05D007869 ORTHO05D009962 6.0e-61 238.8 184 62.0
Gohir.D08G144000 Gossypium hirsutum HOM05D007869 ORTHO05D009962 1.0e-60 238.0 184 62.0
Gohir.A08G122700 Gossypium hirsutum HOM05D007869 ORTHO05D009962 2.3e-60 236.9 184 61.4
Zm00001eb010960 Zea mays HOM05D007869 ORTHO05D009962 2.3e-60 236.9 283 43.5
Os03g0253600 Oryza sativa ssp. japonica HOM05D007869 ORTHO05D009962 3.0e-60 236.5 277 43.7
Zm00001eb398460 Zea mays HOM05D007869 ORTHO05D009962 1.5e-59 234.2 303 41.6
MBI04_g27772_MAGBIO Magnolia biondii HOM05D007869 ORTHO05D009962 7.3e-59 231.9 228 54.8
Os10g0200700 Oryza sativa ssp. japonica HOM05D007869 ORTHO05D009962 1.8e-57 227.3 240 48.3
FvH4_7g18120 Fragaria vesca HOM05D007869 ORTHO05D009962 7.8e-53 211.8 161 66.5
Rhsim01G0181500 Rhododendron simsii HOM05D007869 ORTHO05D009962 2.5e-51 206.8 192 55.7
Dinv32655 Davidia involucrata HOM05D007869 ORTHO05D009962 2.9e-39 166.8 147 53.1
Duzib133G0538 Durio zibethinus HOM05D007869 ORTHO05D009962 2.5e-14 84.0 195 28.2
SEGI_25376 Sequoiadendron giganteum HOM05D007869 ORTHO05D009962 5.1e-12 76.3 113 43.4


User provided reference genes

Program Settings