Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr04g0258561 Lupinus albus HOM05D001596 ORTHO05D007454 4.8e-137 491.1 238 100.0
Lalb_Chr17g0337091 Lupinus albus HOM05D001596 ORTHO05D007454 5.3e-112 407.9 228 87.3
Medtr7g012250 Medicago truncatula HOM05D001596 ORTHO05D007454 1.5e-103 379.8 228 81.1
Psat3g198440 Pisum sativum HOM05D001596 ORTHO05D007454 1.5e-103 379.8 227 78.9
Lj1g0022114 Lotus japonicus HOM05D001596 ORTHO05D007454 7.2e-101 370.9 227 79.3
TPR.G33449 Trifolium pratense HOM05D001596 ORTHO05D007454 1.8e-99 366.3 228 79.4
Glyma.08G241500 Glycine max HOM05D001596 ORTHO05D007454 8.2e-97 357.5 229 75.5
VMungo1383G1350 Vigna mungo HOM05D001596 ORTHO05D007454 1.4e-96 356.7 229 76.0
Phvul.008G036300 Phaseolus vulgaris HOM05D001596 ORTHO05D007454 1.8e-96 356.3 229 76.0
CiPaw.03G091700 Carya illinoinensis HOM05D001596 ORTHO05D007454 2.1e-92 342.8 225 72.9
Haze_14474 Corylus avellana HOM05D001596 ORTHO05D007454 5.2e-91 338.2 228 69.3
Dinv33807 Davidia involucrata HOM05D001596 ORTHO05D007454 4.4e-90 335.1 219 70.8
Cfa007621 Carpinus fangiana HOM05D001596 ORTHO05D007454 2.2e-89 332.8 228 68.4
TWI60G0862 Tripterygium wilfordii HOM05D001596 ORTHO05D007454 7.0e-88 327.8 227 69.6
QL02p039390 Quercus lobata HOM05D001596 ORTHO05D007454 1.2e-87 327.0 224 70.1
Duzib264G1014 Durio zibethinus HOM05D001596 ORTHO05D007454 5.9e-87 324.7 216 69.4
RcHm_v2.0_Chr2g0166601 Rosa chinensis HOM05D001596 ORTHO05D007454 5.9e-87 324.7 214 68.7
Aqoxy3G00463 Aquilegia oxysepala HOM05D001596 ORTHO05D007454 7.7e-87 324.3 224 67.4
QL02p039646 Quercus lobata HOM05D001596 ORTHO05D007454 1.3e-86 323.6 224 69.2
MD17G1056300 Malus domestica HOM05D001596 ORTHO05D007454 2.9e-86 322.4 216 68.1
Rhsim08G0073300 Rhododendron simsii HOM05D001596 ORTHO05D007454 6.5e-86 321.2 224 68.3
Thecc.04G090400 Theobroma cacao HOM05D001596 ORTHO05D007454 1.9e-85 319.7 220 66.4
RcHm_v2.0_Chr6g0268991 Rosa chinensis HOM05D001596 ORTHO05D007454 7.2e-85 317.8 214 67.8
FAN02G3139 Fragaria x ananassa HOM05D001596 ORTHO05D007454 9.4e-85 317.4 214 68.7
Gohir.A11G071400 Gossypium hirsutum HOM05D001596 ORTHO05D007454 9.4e-85 317.4 213 70.4
MD09G1060900 Malus domestica HOM05D001596 ORTHO05D007454 9.4e-85 317.4 218 67.9
TWI32G0402 Tripterygium wilfordii HOM05D001596 ORTHO05D007454 9.4e-85 317.4 227 67.0
arahy.Tifrunner.gnm1.ann1.PFF9RU Arachis hypogaea HOM05D001596 ORTHO05D007454 1.2e-84 317.0 224 70.5
FvH4_6g47530 Fragaria vesca HOM05D001596 ORTHO05D007454 1.6e-84 316.6 214 67.8
FAN05G3728 Fragaria x ananassa HOM05D001596 ORTHO05D007454 1.6e-84 316.6 215 67.9
FAN14G3752 Fragaria x ananassa HOM05D001596 ORTHO05D007454 1.6e-84 316.6 214 67.8
arahy.Tifrunner.gnm1.ann1.RG9N1V Arachis hypogaea HOM05D001596 ORTHO05D007454 2.1e-84 316.2 222 70.7
Lju41A7T38 Lonicera japonica HOM05D001596 ORTHO05D007454 3.6e-84 315.5 247 61.5
Nn4g23337 Nelumbo nucifera HOM05D001596 ORTHO05D007454 4.7e-84 315.1 225 66.2
Gorai.007G081000 Gossypium raimondii HOM05D001596 ORTHO05D007454 8.0e-84 314.3 223 67.7
CSS0015839 Camellia sinensis var. sinensis HOM05D001596 ORTHO05D007454 1.4e-83 313.5 224 67.0
Duzib147G0136 Durio zibethinus HOM05D001596 ORTHO05D007454 1.8e-83 313.2 211 68.2
Eucgr.J01367 Eucalyptus grandis HOM05D001596 ORTHO05D007454 4.0e-83 312.0 227 65.6
Manes.02G050801 Manihot esculenta HOM05D001596 ORTHO05D007454 6.7e-83 311.2 232 63.8
PGR083G0116 Punica granatum HOM05D001596 ORTHO05D007454 8.8e-83 310.8 225 65.8
Gohir.D11G075400 Gossypium hirsutum HOM05D001596 ORTHO05D007454 7.5e-82 307.8 218 67.0
Ciclev10011769m.g Citrus clementina HOM05D001596 ORTHO05D007454 3.7e-81 305.4 207 66.7
Cpa.g.sc14.140 Carica papaya HOM05D001596 ORTHO05D007454 6.3e-81 304.7 230 63.5
Atru.chr8.373 Acer truncatum HOM05D001596 ORTHO05D007454 7.0e-80 301.2 207 67.1
ClCG10G015410 Citrullus lanatus HOM05D001596 ORTHO05D007454 1.2e-79 300.4 224 61.2
MELO3C009840.2 Cucumis melo HOM05D001596 ORTHO05D007454 2.0e-79 299.7 231 60.2
CANSAT64G0989 Cannabis sativa HOM05D001596 ORTHO05D007454 2.7e-79 299.3 232 60.8
vmacro18163 Vaccinium macrocarpon HOM05D001596 ORTHO05D007454 4.5e-79 298.5 255 58.4
HPP92_007741 Vanilla planifolia HOM05D001596 ORTHO05D007454 4.5e-79 298.5 207 65.2
CsaV3_3G041100 Cucumis sativus L. HOM05D001596 ORTHO05D007454 7.7e-79 297.7 225 62.7
PGSC0003DMG400023092 Solanum tuberosum HOM05D001596 ORTHO05D007454 8.5e-78 294.3 223 62.3
PSO478G2046 Papaver somniferum HOM05D001596 ORTHO05D007454 2.5e-77 292.7 219 63.0
Potri.017G089700 Populus trichocarpa HOM05D001596 ORTHO05D007454 4.2e-77 292.0 221 64.7
PSO017G0157 Papaver somniferum HOM05D001596 ORTHO05D007454 7.2e-77 291.2 219 62.6
Sed0001933 Sechium edule HOM05D001596 ORTHO05D007454 1.6e-76 290.0 224 59.8
SEGI_18695 Sequoiadendron giganteum HOM05D001596 ORTHO05D007454 3.6e-76 288.9 206 63.6
Sc04g0005110 Simmondsia chinensis HOM05D001596 ORTHO05D007454 8.0e-76 287.7 224 62.5
Oeu062142.1 Olea europaea HOM05D001596 ORTHO05D007454 1.4e-75 287.0 224 62.9
ATR0111G021 Amborella trichopoda HOM05D001596 ORTHO05D007454 2.3e-75 286.2 226 61.5
Thhalv10027783m.g Eutrema salsugineum HOM05D001596 ORTHO05D007454 5.2e-75 285.0 220 62.3
Cc07_g03840 Coffea canephora HOM05D001596 ORTHO05D007454 4.4e-74 282.0 207 62.3
Solyc03g013310.3 Solanum lycopersicum HOM05D001596 ORTHO05D007454 9.8e-74 280.8 224 61.2
Sp7g02580 Schrenkiella parvula HOM05D001596 ORTHO05D007454 3.7e-73 278.9 221 61.5
Sopen03g012490 Solanum pennellii HOM05D001596 ORTHO05D007454 1.8e-72 276.6 224 60.3
Migut.H00656 Erythranthe guttata HOM05D001596 ORTHO05D007454 3.1e-72 275.8 208 61.5
Aa31LG9G16590 Aethionema arabicum HOM05D001596 ORTHO05D007454 5.4e-72 275.0 220 59.5
AT5G39400 Arabidopsis thaliana HOM05D001596 ORTHO05D007454 5.4e-72 275.0 208 63.5
BcaB06g27297 Brassica carinata HOM05D001596 ORTHO05D007454 5.4e-72 275.0 221 61.1
C04p45720 Brassica napus HOM05D001596 ORTHO05D007454 5.4e-72 275.0 221 61.1
BolC4t26157H Brassica oleracea HOM05D001596 ORTHO05D007454 5.4e-72 275.0 221 61.1
BcaB02g07985 Brassica carinata HOM05D001596 ORTHO05D007454 2.0e-71 273.1 223 61.0
BcaB06g27323 Brassica carinata HOM05D001596 ORTHO05D007454 2.7e-71 272.7 221 61.1
CARHR262960 Cardamine hirsuta HOM05D001596 ORTHO05D007454 2.7e-71 272.7 210 62.4
AL7G50930 Arabidopsis lyrata HOM05D001596 ORTHO05D007454 5.9e-71 271.6 208 63.0
BcaC08g44416 Brassica carinata HOM05D001596 ORTHO05D007454 5.9e-71 271.6 223 60.5
BolC6t37066H Brassica oleracea HOM05D001596 ORTHO05D007454 5.9e-71 271.6 223 60.5
C06p18530 Brassica napus HOM05D001596 ORTHO05D007454 1.3e-70 270.4 223 60.1
DCAR_005555 Daucus carota HOM05D001596 ORTHO05D007454 1.7e-70 270.0 207 59.9
BraA04t16874Z Brassica rapa HOM05D001596 ORTHO05D007454 2.3e-70 269.6 221 60.6
THA.LOC104805493 Tarenaya hassleriana HOM05D001596 ORTHO05D007454 2.3e-70 269.6 207 62.8
A04p12090 Brassica napus HOM05D001596 ORTHO05D007454 3.8e-70 268.9 221 60.6
A07p19970 Brassica napus HOM05D001596 ORTHO05D007454 3.8e-70 268.9 223 60.1
BraA07t29696Z Brassica rapa HOM05D001596 ORTHO05D007454 3.8e-70 268.9 223 60.1
SalBow1G0648 Salvia bowleyana HOM05D001596 ORTHO05D007454 1.1e-69 267.3 208 60.6
TAR374G0779 Trochodendron aralioides HOM05D001596 ORTHO05D007454 1.5e-69 266.9 169 71.6
Carub.0007s3654 Capsella rubella HOM05D001596 ORTHO05D007454 2.8e-68 262.7 221 59.3
Hma1.2p1_1813F.1_g303840 Hydrangea macrophylla HOM05D001596 ORTHO05D007454 6.1e-68 261.5 177 71.2
Prupe.3G259200 Prunus persica HOM05D001596 ORTHO05D007454 4.4e-66 255.4 178 66.3
CiPaw.04G058900 Carya illinoinensis HOM05D001596 ORTHO05D007454 1.1e-64 250.8 206 61.7
Nitab4.5_0005196g0030 Nicotiana tabacum HOM05D001596 ORTHO05D007454 1.2e-63 247.3 225 54.2
Nitab4.5_0001637g0100 Nicotiana tabacum HOM05D001596 ORTHO05D007454 1.5e-61 240.4 219 55.7
SEGI_14678 Sequoiadendron giganteum HOM05D001596 ORTHO05D007454 1.9e-61 240.0 206 57.8
Mapoly0058s0093 Marchantia polymorpha HOM05D001596 ORTHO05D007454 3.1e-59 232.6 207 51.7
Ca_06803_v3 Cicer arietinum L. HOM05D001596 ORTHO05D007454 7.5e-58 228.0 145 76.6
GSVIVG01011485001 Vitis vinifera HOM05D001596 ORTHO05D007454 2.9e-57 226.1 164 64.0
SMO118G0408 Selaginella moellendorffii HOM05D001596 ORTHO05D007454 9.2e-56 221.1 206 54.4
COL.COLO4_07429 Corchorus olitorius HOM05D001596 ORTHO05D007454 1.3e-54 217.2 141 68.8
CBR_g29865 Chara braunii HOM05D001596 ORTHO05D007454 7.3e-53 211.5 213 49.8
SGA_v2.0_scaffold413G51159 Striga asiatica HOM05D001596 ORTHO05D007454 1.2e-50 204.1 207 49.3
FAN09G2972 Fragaria x ananassa HOM05D001596 ORTHO05D007454 3.0e-46 189.5 126 67.5
Lsat_1_v5_gn_3_98880 Lactuca sativa HOM05D001596 ORTHO05D007454 1.5e-45 187.2 225 45.3
Lsat_1_v5_gn_3_98660 Lactuca sativa HOM05D001596 ORTHO05D007454 9.5e-45 184.5 208 48.1
RcHm_v2.0_Chr5g0056771 Rosa chinensis HOM05D001596 ORTHO05D007454 1.1e-43 181.0 143 59.4
HanXRQChr15g0473081 Helianthus annuus HOM05D001596 ORTHO05D007454 1.8e-43 180.3 224 46.4
ECA246G1680 Erigeron canadensis HOM05D001596 ORTHO05D007454 3.1e-43 179.5 207 49.8
Lsat_1_v5_gn_7_89141 Lactuca sativa HOM05D001596 ORTHO05D007454 1.2e-42 177.6 217 43.8
Lsat_1_v5_gn_3_98761 Lactuca sativa HOM05D001596 ORTHO05D007454 3.4e-42 176.0 211 46.9
Lsat_1_v5_gn_3_98721 Lactuca sativa HOM05D001596 ORTHO05D007454 1.1e-40 171.0 208 45.2
SGA_v2.0_scaffold413G51158 Striga asiatica HOM05D001596 ORTHO05D007454 7.1e-40 168.3 143 56.6
FAN09G3451 Fragaria x ananassa HOM05D001596 ORTHO05D007454 3.1e-35 152.9 99 68.7
FAN09G0681 Fragaria x ananassa HOM05D001596 ORTHO05D007454 6.9e-27 125.2 70 75.7
Peaxi162Scf00451g00420 Petunia axillaris HOM05D001596 ORTHO05D007454 1.6e-20 104.0 64 73.4
Actinidia17573 Actinidia chinensis HOM05D001596 ORTHO05D007454 1.8e-19 100.5 65 72.3
AagrBONN_evm.TU.Sc2ySwM_228.2959 Anthoceros agrestis HOM05D001596 ORTHO05D007454 5.6e-13 79.0 119 39.5
unitig_62.g23436 Utricularia gibba HOM05D001596 ORTHO05D007454 6.0e-07 58.9 63 46.0


User provided reference genes

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