Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr04g0257671 Lupinus albus HOM05D004062 ORTHO05D004417 1.3e-67 259.6 130 100.0
Glyma.02G089500 Glycine max HOM05D004062 ORTHO05D004417 3.6e-38 161.8 137 62.8
Glyma.18G293500 Glycine max HOM05D004062 ORTHO05D004417 1.1e-37 160.2 135 62.2
Phvul.008G008800 Phaseolus vulgaris HOM05D004062 ORTHO05D004417 2.3e-37 159.1 134 64.9
VMungo1383G2158 Vigna mungo HOM05D004062 ORTHO05D004417 6.8e-37 157.5 136 63.2
Glyma.18G293600 Glycine max HOM05D004062 ORTHO05D004417 1.9e-34 149.4 136 62.5
Glyma.02G089400 Glycine max HOM05D004062 ORTHO05D004417 2.1e-33 146.0 135 60.7
arahy.Tifrunner.gnm1.ann1.95RUG0 Arachis hypogaea HOM05D004062 ORTHO05D004417 2.7e-33 145.6 134 59.7
arahy.Tifrunner.gnm1.ann1.EB5M6E Arachis hypogaea HOM05D004062 ORTHO05D004417 2.7e-33 145.6 134 59.7
Lj1g0017758 Lotus japonicus HOM05D004062 ORTHO05D004417 3.0e-32 142.1 143 57.3
Psat3g097280 Pisum sativum HOM05D004062 ORTHO05D004417 2.1e-30 136.0 134 54.5
Lalb_Chr17g0335981 Lupinus albus HOM05D004062 ORTHO05D004417 4.7e-30 134.8 139 54.0
Lj1g0013725 Lotus japonicus HOM05D004062 ORTHO05D004417 1.1e-29 133.7 133 52.6
TPR.G16541 Trifolium pratense HOM05D004062 ORTHO05D004417 6.8e-29 131.0 132 56.1
Medtr7g082750 Medicago truncatula HOM05D004062 ORTHO05D004417 8.9e-29 130.6 134 55.2
Medtr7g082730 Medicago truncatula HOM05D004062 ORTHO05D004417 1.2e-28 130.2 128 57.8
VMungo1383G0607 Vigna mungo HOM05D004062 ORTHO05D004417 1.5e-28 129.8 134 53.7
Medtr7g082700 Medicago truncatula HOM05D004062 ORTHO05D004417 2.0e-28 129.4 130 57.7
Medtr7g082740 Medicago truncatula HOM05D004062 ORTHO05D004417 2.0e-28 129.4 130 57.7
Lj1g0027246 Lotus japonicus HOM05D004062 ORTHO05D004417 9.9e-28 127.1 140 52.1
Phvul.008G008700 Phaseolus vulgaris HOM05D004062 ORTHO05D004417 3.7e-27 125.2 132 52.3
arahy.Tifrunner.gnm1.ann1.56V7KA Arachis hypogaea HOM05D004062 ORTHO05D004417 2.4e-26 122.5 145 54.5
arahy.Tifrunner.gnm1.ann1.RE711V Arachis hypogaea HOM05D004062 ORTHO05D004417 2.4e-26 122.5 145 54.5
Ca_08097_v3 Cicer arietinum L. HOM05D004062 ORTHO05D004417 2.4e-26 122.5 131 54.2
Ca_08095_v3 Cicer arietinum L. HOM05D004062 ORTHO05D004417 4.1e-26 121.7 129 55.0
Ca_08096_v3 Cicer arietinum L. HOM05D004062 ORTHO05D004417 5.4e-26 121.3 129 54.3
Psat3g097360 Pisum sativum HOM05D004062 ORTHO05D004417 5.4e-26 121.3 129 55.8
Medtr7g082760 Medicago truncatula HOM05D004062 ORTHO05D004417 9.2e-26 120.6 131 53.4
Psat3g097240 Pisum sativum HOM05D004062 ORTHO05D004417 2.7e-25 119.0 127 52.8
TPR.G16550 Trifolium pratense HOM05D004062 ORTHO05D004417 3.3e-23 112.1 129 51.2
TPR.G11392 Trifolium pratense HOM05D004062 ORTHO05D004417 1.2e-22 110.2 122 51.6
TPR.G16561 Trifolium pratense HOM05D004062 ORTHO05D004417 4.7e-22 108.2 130 49.2
Psat3g097320 Pisum sativum HOM05D004062 ORTHO05D004417 1.4e-21 106.7 127 53.5
Duzib138G0221 Durio zibethinus HOM05D004062 ORTHO05D004417 6.8e-21 104.4 128 45.3
Nn4g23971 Nelumbo nucifera HOM05D004062 ORTHO05D004417 6.8e-21 104.4 135 45.2
Lj1g0018189 Lotus japonicus HOM05D004062 ORTHO05D004417 1.5e-20 103.2 133 48.9
Thecc.04G128000 Theobroma cacao HOM05D004062 ORTHO05D004417 9.9e-20 100.5 130 41.5
COL.COLO4_09380 Corchorus olitorius HOM05D004062 ORTHO05D004417 2.9e-19 99.0 134 41.0
Dinv34790 Davidia involucrata HOM05D002710 ORTHO05D002905 2.9e-19 99.0 135 44.4
Nn3g17968 Nelumbo nucifera HOM05D004062 ORTHO05D004417 3.8e-19 98.6 127 45.7
Gohir.D11G172800 Gossypium hirsutum HOM05D004062 ORTHO05D004417 6.4e-19 97.8 124 41.9
Gohir.D11G172400 Gossypium hirsutum HOM05D004062 ORTHO05D004417 1.9e-18 96.3 124 41.9
QL02p050215 Quercus lobata HOM05D004062 ORTHO05D004417 3.2e-18 95.5 134 45.5
CiPaw.04G044300 Carya illinoinensis HOM05D004062 ORTHO05D004417 4.2e-18 95.1 131 43.5
Gorai.007G185100 Gossypium raimondii HOM05D004062 ORTHO05D004417 4.2e-18 95.1 124 41.1
Dinv33967 Davidia involucrata HOM05D004062 ORTHO05D004417 5.4e-18 94.7 123 47.2
Gohir.A11G166400 Gossypium hirsutum HOM05D004062 ORTHO05D004417 2.1e-17 92.8 130 39.2
Haze_14190 Corylus avellana HOM05D004062 ORTHO05D004417 7.8e-17 90.9 130 43.8
CiPaw.03G065300 Carya illinoinensis HOM05D004062 ORTHO05D004417 1.0e-16 90.5 136 41.2
Sabra17G0098800 Salix brachista HOM05D004062 ORTHO05D004417 1.3e-16 90.1 128 43.0
MBI16_g14297_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 3.0e-16 89.0 125 41.6
MBI16_g14298_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 3.9e-16 88.6 123 40.7
Potri.017G119800 Populus trichocarpa HOM05D004062 ORTHO05D004417 5.1e-16 88.2 133 39.8
Aqoxy3G03995 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 1.5e-15 86.7 136 41.9
Aqoxy3G03996 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 1.9e-15 86.3 128 39.8
MBI16_g14296_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 7.3e-15 84.3 114 43.0
Eucgr.F02795 Eucalyptus grandis HOM05D004062 ORTHO05D004417 9.6e-15 84.0 135 39.3
TAR622G0216 Trochodendron aralioides HOM05D004062 ORTHO05D004417 9.6e-15 84.0 130 37.7
Potri.004G095150 Populus trichocarpa HOM05D004062 ORTHO05D004417 1.3e-14 83.6 133 40.6
Potri.004G095200 Populus trichocarpa HOM05D004062 ORTHO05D004417 1.3e-14 83.6 133 40.6
Rhsim08G0083900 Rhododendron simsii HOM05D004062 ORTHO05D004417 1.3e-14 83.6 125 40.8
Manes.01G113100 Manihot esculenta HOM05D004062 ORTHO05D004417 2.8e-14 82.4 127 40.2
DCAR_010711 Daucus carota HOM05D004062 ORTHO05D004417 4.8e-14 81.6 124 40.3
Hma1.2p1_0500F.1_g167200 Hydrangea macrophylla HOM05D004062 ORTHO05D004417 1.1e-13 80.5 118 44.1
PGR004G1762 Punica granatum HOM05D004062 ORTHO05D004417 1.4e-13 80.1 128 36.7
Rhsim10G0073300 Rhododendron simsii HOM05D004062 ORTHO05D004417 1.8e-13 79.7 130 36.9
TAR622G1405 Trochodendron aralioides HOM05D004062 ORTHO05D004417 2.4e-13 79.3 127 36.2
DCAR_010710 Daucus carota HOM05D004062 ORTHO05D004417 3.1e-13 79.0 122 40.2
MBI18_g04358_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 4.0e-13 78.6 123 39.0
Cc07_g08490 Coffea canephora HOM05D004062 ORTHO05D004417 6.9e-13 77.8 132 39.4
Sabra04G0064400 Salix brachista HOM05D004062 ORTHO05D004417 6.9e-13 77.8 131 38.9
CSS0038275 Camellia sinensis var. sinensis HOM05D004062 ORTHO05D004417 1.5e-12 76.6 133 37.6
Manes.02G072000 Manihot esculenta HOM05D004062 ORTHO05D004417 2.0e-12 76.3 132 37.9
TAR629G2241 Trochodendron aralioides HOM05D004062 ORTHO05D004417 2.0e-12 76.3 122 40.2
CSS0019285 Camellia sinensis var. sinensis HOM05D004062 ORTHO05D004417 4.4e-12 75.1 133 37.6
CANSAT78G1768 Cannabis sativa HOM05D004062 ORTHO05D004417 5.8e-12 74.7 137 37.2
Lsat_1_v5_gn_3_82781 Lactuca sativa HOM05D004062 ORTHO05D004417 1.3e-11 73.6 121 35.5
Rhsim09G0103200 Rhododendron simsii HOM05D004062 ORTHO05D004417 2.2e-11 72.8 125 33.6
Atru.chr1.1607 Acer truncatum HOM05D004062 ORTHO05D004417 2.9e-11 72.4 143 37.1
Actinidia15903 Actinidia chinensis HOM05D002710 ORTHO05D002905 2.9e-11 72.4 139 38.1
MSTRG.23597 Avicennia marina HOM05D004062 ORTHO05D004417 4.9e-11 71.6 127 40.9
CiPaw.05G243300 Carya illinoinensis HOM05D004062 ORTHO05D004417 4.9e-11 71.6 131 35.9
FAN22G1760 Fragaria x ananassa HOM05D004062 ORTHO05D004417 6.4e-11 71.2 139 35.3
RcHm_v2.0_Chr4g0434311 Rosa chinensis HOM05D004062 ORTHO05D004417 6.4e-11 71.2 138 35.5
FAN07G0543 Fragaria x ananassa HOM05D004062 ORTHO05D004417 8.4e-11 70.9 139 35.3
FAN17G2092 Fragaria x ananassa HOM05D004062 ORTHO05D004417 8.4e-11 70.9 137 35.8
Aqoxy3G03997 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 1.1e-10 70.5 124 33.9
FvH4_4g26630 Fragaria vesca HOM05D004062 ORTHO05D004417 1.1e-10 70.5 139 35.3
FAN12G0456 Fragaria x ananassa HOM05D004062 ORTHO05D004417 1.1e-10 70.5 139 35.3
FAN12G4350 Fragaria x ananassa HOM05D004062 ORTHO05D004417 1.1e-10 70.5 139 35.3
Ciclev10017837m.g Citrus clementina HOM05D004062 ORTHO05D004417 1.4e-10 70.1 135 36.3
SalBow3G0055 Salvia bowleyana HOM05D004062 ORTHO05D004417 1.9e-10 69.7 99 43.4
Ciclev10018020m.g Citrus clementina HOM05D004062 ORTHO05D004417 3.2e-10 68.9 138 33.3
DCAR_010708 Daucus carota HOM05D004062 ORTHO05D004417 3.2e-10 68.9 107 38.3
Aqoxy3G03994 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 5.4e-10 68.2 126 38.1
Oeu041981.1 Olea europaea HOM05D004062 ORTHO05D004417 7.1e-10 67.8 131 34.4
Potri.010G119200 Populus trichocarpa HOM05D004062 ORTHO05D004417 9.3e-10 67.4 134 35.1
SalBow5G1592 Salvia bowleyana HOM05D004062 ORTHO05D004417 9.3e-10 67.4 120 40.8
DCAR_010709 Daucus carota HOM05D004062 ORTHO05D004417 4.6e-09 65.1 119 37.8
Migut.H00242 Erythranthe guttata HOM05D004062 ORTHO05D004417 4.6e-09 65.1 125 35.2
Eucgr.B02857 Eucalyptus grandis HOM05D004062 ORTHO05D004417 6.0e-09 64.7 141 31.9
Oeu030797.1 Olea europaea HOM05D004062 ORTHO05D004417 6.0e-09 64.7 86 44.2
Oeu030798.1 Olea europaea HOM05D004062 ORTHO05D004417 6.0e-09 64.7 86 44.2
DCAR_010706 Daucus carota HOM05D004062 ORTHO05D004417 7.8e-09 64.3 120 35.0
DCAR_010707 Daucus carota HOM05D004062 ORTHO05D004417 7.8e-09 64.3 105 36.2
SGA_v2.0_scaffold202G41473 Striga asiatica HOM05D004062 ORTHO05D004417 1.0e-08 63.9 118 41.5
DCAR_010713 Daucus carota HOM05D004062 ORTHO05D004417 1.3e-08 63.5 119 35.3
Dinv16146 Davidia involucrata HOM05D004062 ORTHO05D004417 1.3e-08 63.5 121 33.1
Dinv31584 Davidia involucrata HOM05D004062 ORTHO05D004417 1.3e-08 63.5 95 37.9
Hma1.2p1_0767F.1_g215470 Hydrangea macrophylla HOM05D004062 ORTHO05D004417 1.3e-08 63.5 118 32.2
PGSC0003DMG400016976 Solanum tuberosum HOM05D004062 ORTHO05D004417 1.3e-08 63.5 104 35.6
PGSC0003DMG400030667 Solanum tuberosum HOM05D004062 ORTHO05D004417 1.3e-08 63.5 104 35.6
Oeu012583.1 Olea europaea HOM05D004062 ORTHO05D004417 3.0e-08 62.4 120 38.3
DCAR_010712 Daucus carota HOM05D004062 ORTHO05D004417 3.9e-08 62.0 117 39.3
Cpa.g.sc314.3 Carica papaya HOM05D004062 ORTHO05D004417 6.6e-08 61.2 124 33.9
Medtr3g100640 Medicago truncatula HOM05D004062 ORTHO05D004417 6.6e-08 61.2 67 49.3
Oeu047438.1 Olea europaea HOM05D004062 ORTHO05D004417 8.7e-08 60.8 119 35.3
Sabra10G0089600 Salix brachista HOM05D004062 ORTHO05D004417 8.7e-08 60.8 133 31.6
Rhsim09G0103100 Rhododendron simsii HOM05D004062 ORTHO05D004417 1.5e-07 60.1 118 33.1
Ciclev10018255m.g Citrus clementina HOM05D004062 ORTHO05D004417 5.6e-07 58.2 138 31.2
MBI10_g08537_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 5.6e-07 58.2 131 32.8
Prupe.1G317700 Prunus persica HOM05D004062 ORTHO05D004417 5.6e-07 58.2 135 36.3
Prupe.1G317600 Prunus persica HOM05D004062 ORTHO05D004417 7.3e-07 57.8 132 37.9
Oeu011480.1 Olea europaea HOM05D003529 ORTHO05D004106 9.6e-07 57.4 127 32.3
Thecc.02G220400 Theobroma cacao HOM05D004062 ORTHO05D004417 1.6e-06 56.6 129 31.0
Cc11_g09580 Coffea canephora HOM05D004062 ORTHO05D004417 6.2e-06 54.7 133 29.3


User provided reference genes

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