Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr04g0254991 Lupinus albus HOM05D006903 ORTHO05D008655 7.4e-240 833.6 449 100.0
Glyma.02G101000 Glycine max HOM05D006903 ORTHO05D008655 1.8e-185 652.9 451 78.5
Ca_26576_v3 Cicer arietinum L. HOM05D006903 ORTHO05D008655 1.2e-184 650.2 451 76.1
Phvul.003G026200 Phaseolus vulgaris HOM05D006903 ORTHO05D008655 6.3e-183 644.4 451 75.4
VMungo1215G2648 Vigna mungo HOM05D006903 ORTHO05D008655 7.8e-181 637.5 451 74.9
Lj2g0014822 Lotus japonicus HOM05D006903 ORTHO05D008655 3.8e-180 635.2 408 80.6
arahy.Tifrunner.gnm1.ann1.9PC4TR Arachis hypogaea HOM05D006903 ORTHO05D008655 2.3e-177 625.9 453 74.4
arahy.Tifrunner.gnm1.ann1.RDH5GK Arachis hypogaea HOM05D006903 ORTHO05D008655 2.2e-175 619.4 453 73.5
Medtr5g053280 Medicago truncatula HOM05D006903 ORTHO05D008655 3.7e-175 618.6 449 72.6
TPR.G22411 Trifolium pratense HOM05D006903 ORTHO05D008655 3.6e-170 602.1 377 81.4
Haze_17427 Corylus avellana HOM05D006903 ORTHO05D008655 2.0e-152 543.1 448 64.1
Haze_17428 Corylus avellana HOM05D006903 ORTHO05D008655 2.0e-152 543.1 448 64.1
QL01p001027 Quercus lobata HOM05D006903 ORTHO05D008655 1.6e-149 533.5 448 62.5
CSS0045037 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 1.2e-146 523.9 400 67.0
GSVIVG01011964001 Vitis vinifera HOM05D006903 ORTHO05D008655 3.1e-145 519.2 443 62.3
Prupe.1G304300 Prunus persica HOM05D006903 ORTHO05D008655 4.0e-145 518.8 406 67.2
MD13G1047700 Malus domestica HOM05D006903 ORTHO05D008655 5.3e-145 518.5 404 66.6
Peaxi162Scf00367g00739 Petunia axillaris HOM05D006903 ORTHO05D008655 3.4e-144 515.8 441 62.4
FAN12G3275 Fragaria x ananassa HOM05D006903 ORTHO05D008655 7.6e-144 514.6 406 65.5
RcHm_v2.0_Chr4g0435961 Rosa chinensis HOM05D006903 ORTHO05D008655 7.6e-144 514.6 437 61.8
Dinv16514 Davidia involucrata HOM05D006903 ORTHO05D008655 1.3e-143 513.8 400 65.2
Actinidia14845 Actinidia chinensis HOM05D006903 ORTHO05D008655 3.8e-143 512.3 400 65.8
FvH4_4g28200 Fragaria vesca HOM05D006903 ORTHO05D008655 4.9e-143 511.9 406 65.0
FAN22G1870 Fragaria x ananassa HOM05D006903 ORTHO05D008655 1.1e-142 510.8 406 65.3
Duzib248G0677 Durio zibethinus HOM05D006903 ORTHO05D008655 1.4e-142 510.4 450 62.2
Hund05771 Selenicereus undatus HOM05D006903 ORTHO05D008655 3.2e-142 509.2 404 64.1
Rhsim09G0113100 Rhododendron simsii HOM05D006903 ORTHO05D008655 7.1e-142 508.1 399 65.9
Sabra10G0099600 Salix brachista HOM05D006903 ORTHO05D008655 1.2e-141 507.3 401 66.8
Sed0022387 Sechium edule HOM05D006903 ORTHO05D008655 3.5e-141 505.8 407 63.9
CsaV3_5G033920 Cucumis sativus L. HOM05D006903 ORTHO05D008655 1.3e-140 503.8 405 63.7
CANSAT64G1629 Cannabis sativa HOM05D006903 ORTHO05D008655 1.7e-140 503.4 448 60.7
Cpa.g.sc1.226 Carica papaya HOM05D006903 ORTHO05D008655 3.0e-140 502.7 404 64.9
DCAR_030091 Daucus carota HOM05D006903 ORTHO05D008655 6.6e-140 501.5 400 65.0
Nitab4.5_0005803g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 6.6e-140 501.5 400 65.0
Migut.E00291 Erythranthe guttata HOM05D006903 ORTHO05D008655 8.7e-140 501.1 401 63.8
Potri.010G130700 Populus trichocarpa HOM05D006903 ORTHO05D008655 8.7e-140 501.1 433 62.4
CiPaw.16G002500 Carya illinoinensis HOM05D006903 ORTHO05D008655 1.1e-139 500.7 433 63.0
CAN.G184.79 Capsicum annuum HOM05D006903 ORTHO05D008655 4.3e-139 498.8 407 63.4
Thhalv10007585m.g Eutrema salsugineum HOM05D006903 ORTHO05D008655 4.3e-139 498.8 406 63.5
Sc04g0006770 Simmondsia chinensis HOM05D006903 ORTHO05D008655 5.6e-139 498.4 400 63.5
FAN17G3035 Fragaria x ananassa HOM05D006903 ORTHO05D008655 1.8e-137 493.4 406 64.3
BraA08t34657Z Brassica rapa HOM05D006903 ORTHO05D008655 2.4e-137 493.0 404 63.4
Psat0s629g0200 Pisum sativum HOM05D006903 ORTHO05D008655 2.4e-137 493.0 330 77.9
A08p27120 Brassica napus HOM05D006903 ORTHO05D008655 6.9e-137 491.5 404 62.9
Sopen05g005730 Solanum pennellii HOM05D006903 ORTHO05D008655 6.9e-137 491.5 400 63.8
Sp1g22600 Schrenkiella parvula HOM05D006903 ORTHO05D008655 4.5e-136 488.8 405 62.2
AT1G26090 Arabidopsis thaliana HOM05D006903 ORTHO05D008655 2.9e-135 486.1 407 61.9
PGR119G0052 Punica granatum HOM05D006903 ORTHO05D008655 2.9e-135 486.1 403 63.3
PSO478G5279 Papaver somniferum HOM05D006903 ORTHO05D008655 3.8e-135 485.7 406 60.6
Lj3C1020T9 Lonicera japonica HOM05D006903 ORTHO05D008655 4.9e-135 485.3 399 64.4
C03p72740 Brassica napus HOM05D006903 ORTHO05D008655 8.4e-135 484.6 400 63.0
Oeu044621.1 Olea europaea HOM05D006903 ORTHO05D008655 1.4e-134 483.8 400 63.2
Carub.0001s2488 Capsella rubella HOM05D006903 ORTHO05D008655 4.2e-134 482.3 404 61.4
SalBow8G1412 Salvia bowleyana HOM05D006903 ORTHO05D008655 4.2e-134 482.3 399 62.4
EL10Ac6g14516 Beta vulgaris HOM05D006903 ORTHO05D008655 5.4e-134 481.9 402 61.9
BolC3t19572H Brassica oleracea HOM05D006903 ORTHO05D008655 5.4e-134 481.9 400 62.8
Eucgr.G02357 Eucalyptus grandis HOM05D006903 ORTHO05D008655 5.4e-134 481.9 399 63.2
Aqoxy3G00382 Aquilegia oxysepala HOM05D006903 ORTHO05D008655 7.1e-134 481.5 406 61.8
AUR62002930 Chenopodium quinoa HOM05D006903 ORTHO05D008655 9.3e-134 481.1 400 61.2
HanXRQChr15g0476011 Helianthus annuus HOM05D006903 ORTHO05D008655 9.3e-134 481.1 448 57.1
Gorai.005G137600 Gossypium raimondii HOM05D006903 ORTHO05D008655 1.2e-133 480.7 404 62.9
Lsat_1_v5_gn_3_58300 Lactuca sativa HOM05D006903 ORTHO05D008655 1.6e-133 480.3 401 62.8
CARHR025840 Cardamine hirsuta HOM05D006903 ORTHO05D008655 2.1e-133 479.9 404 61.9
AL1G39690 Arabidopsis lyrata HOM05D006903 ORTHO05D008655 3.0e-132 476.1 407 60.2
Nn3g17696 Nelumbo nucifera HOM05D006903 ORTHO05D008655 3.0e-132 476.1 408 61.0
Aa31LG7G8910 Aethionema arabicum HOM05D006903 ORTHO05D008655 6.7e-132 474.9 402 61.9
Cc11_g10700 Coffea canephora HOM05D006903 ORTHO05D008655 4.3e-131 472.2 400 62.2
ClCG05G023070 Citrullus lanatus HOM05D006903 ORTHO05D008655 1.6e-130 470.3 445 56.9
MELO3C012210.2 Cucumis melo HOM05D006903 ORTHO05D008655 2.8e-130 469.5 425 58.8
FAN07G2589 Fragaria x ananassa HOM05D006903 ORTHO05D008655 3.1e-129 466.1 406 61.3
Nitab4.5_0004705g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 3.1e-129 466.1 400 62.2
Cfa018642 Carpinus fangiana HOM05D006903 ORTHO05D008655 2.6e-128 463.0 448 58.0
MBI10_g08549_MAGBIO Magnolia biondii HOM05D006903 ORTHO05D008655 4.9e-127 458.8 441 56.2
COL.COLO4_07859 Corchorus olitorius HOM05D006903 ORTHO05D008655 4.2e-126 455.7 404 60.1
BcaB03g12083 Brassica carinata HOM05D006903 ORTHO05D008655 9.3e-126 454.5 406 60.1
TWI31G1007 Tripterygium wilfordii HOM05D006903 ORTHO05D008655 3.9e-124 449.1 420 61.9
PGSC0003DMG400000822 Solanum tuberosum HOM05D006903 ORTHO05D008655 5.1e-124 448.7 374 61.8
ECA246G0069 Erigeron canadensis HOM05D006903 ORTHO05D008655 1.1e-123 447.6 374 62.8
Ciclev10033640m.g Citrus clementina HOM05D006903 ORTHO05D008655 3.8e-119 432.6 379 60.4
ATR0053G028 Amborella trichopoda HOM05D006903 ORTHO05D008655 6.7e-116 421.8 405 57.5
Atru.chr11.1372 Acer truncatum HOM05D006903 ORTHO05D008655 1.6e-114 417.2 329 65.3
Zm00001eb252440 Zea mays HOM05D006903 ORTHO05D008655 1.1e-113 414.5 394 55.8
PSO017G3486 Papaver somniferum HOM05D006903 ORTHO05D008655 1.4e-113 414.1 355 59.2
Manes.06G073100 Manihot esculenta HOM05D006903 ORTHO05D008655 1.5e-112 410.6 328 65.5
unitig_62.g23710 Utricularia gibba HOM05D006903 ORTHO05D008655 2.0e-112 410.2 434 53.0
AUR62007740 Chenopodium quinoa HOM05D006903 ORTHO05D008655 3.6e-109 399.4 376 55.6
SGA_v2.0_scaffold14G06815 Striga asiatica HOM05D006903 ORTHO05D008655 8.2e-106 388.3 330 60.6
AagrBONN_evm.TU.Sc2ySwM_117.1113 Anthoceros agrestis HOM05D006903 ORTHO05D008655 1.6e-101 374.0 401 51.1
Ah.03g137980 Amaranthus hybridus HOM05D006903 ORTHO05D008655 1.0e-100 371.3 396 50.3
Thecc.02G362300 Theobroma cacao HOM05D006903 ORTHO05D008655 1.4e-97 360.9 293 64.5
Hma1.2p1_0406F.1_g145980 Hydrangea macrophylla HOM05D006903 ORTHO05D008655 2.2e-95 353.6 293 63.8
SEGI_13133 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 9.4e-94 348.2 361 54.0
Pp3c6_9390 Physcomitrium patens HOM05D006903 ORTHO05D008655 2.7e-93 346.7 401 47.9
TAR629G3475 Trochodendron aralioides HOM05D006903 ORTHO05D008655 1.4e-92 344.4 293 60.8
vmacro10523 Vaccinium macrocarpon HOM05D006903 ORTHO05D008655 2.3e-92 343.6 376 51.3
Mapoly0088s0003 Marchantia polymorpha HOM05D006903 ORTHO05D008655 7.0e-89 332.0 400 45.2
Gohir.D02G116200 Gossypium hirsutum HOM05D006903 ORTHO05D008655 1.1e-86 324.7 264 64.8
Gohir.A03G097100 Gossypium hirsutum HOM05D006903 ORTHO05D008655 1.9e-86 323.9 264 64.8
SEGI_18137 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 3.4e-83 313.2 333 53.5
SMO367G1048 Selaginella moellendorffii HOM05D006903 ORTHO05D008655 3.5e-80 303.1 405 43.7
Solyc05g009920.4 Solanum lycopersicum HOM05D006903 ORTHO05D008655 5.5e-78 295.8 234 65.8
HanXRQChr00c0584g0576181 Helianthus annuus HOM05D006903 ORTHO05D008655 3.1e-73 280.0 266 57.5
Glyma.01G089202 Glycine max HOM05D006903 ORTHO05D008655 2.2e-58 230.7 145 75.2
HPP92_003072 Vanilla planifolia HOM05D006903 ORTHO05D008655 1.1e-46 191.8 248 45.2
HPP92_003073 Vanilla planifolia HOM05D006903 ORTHO05D008655 1.1e-44 185.3 166 58.4
GSVIVG01021676001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.1e-44 185.3 130 72.3
Os02g0711200 Oryza sativa ssp. japonica HOM05D006903 ORTHO05D008655 1.3e-42 178.3 162 56.2
Potri.008G115401 Populus trichocarpa HOM05D006903 ORTHO05D008655 2.1e-40 171.0 153 56.2
CSS0042654 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 8.4e-34 149.1 146 57.5
GSVIVG01031030001 Vitis vinifera HOM05D006903 ORTHO05D008655 5.6e-30 136.3 101 67.3
HanXRQChr00c0584g0576191 Helianthus annuus HOM05D006903 ORTHO05D008655 2.3e-23 114.4 104 58.7
GSVIVG01021677001 Vitis vinifera HOM05D006903 ORTHO05D008655 3.0e-23 114.0 95 61.1
CSS0002023 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 3.3e-22 110.5 122 54.1
TAR629G0855 Trochodendron aralioides HOM05D006903 ORTHO05D008655 3.1e-20 104.0 70 71.4
TAR626G1973 Trochodendron aralioides HOM05D006903 ORTHO05D008655 1.1e-17 95.5 91 52.7


User provided reference genes

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