Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr04g0254811 Lupinus albus HOM05D005032 ORTHO05D237543 5.4e-47 190.7 96 100.0
Lalb_Chr17g0341981 Lupinus albus HOM05D005032 ORTHO05D006268 2.5e-12 75.5 46 87.0
COL.COLO4_07886 Corchorus olitorius HOM05D005032 ORTHO05D006268 1.2e-11 73.2 89 55.1
Glyma.01G084500 Glycine max HOM05D005032 ORTHO05D006268 2.1e-11 72.4 47 78.7
Phvul.003G028700 Phaseolus vulgaris HOM05D005032 ORTHO05D006268 8.1e-11 70.5 45 77.8
Glyma.10G276200 Glycine max HOM05D005032 ORTHO05D006268 1.4e-10 69.7 46 78.3
Psat6g229600 Pisum sativum HOM05D005032 ORTHO05D006268 1.4e-10 69.7 46 78.3
Phvul.007G025400 Phaseolus vulgaris HOM05D005032 ORTHO05D006268 1.8e-10 69.3 46 78.3
VMungo0720G2532 Vigna mungo HOM05D005032 ORTHO05D006268 1.8e-10 69.3 46 78.3
Lj2g0024967 Lotus japonicus HOM05D005032 ORTHO05D006268 2.4e-10 68.9 47 74.5
Medtr1g111330 Medicago truncatula HOM05D005032 ORTHO05D006268 4.0e-10 68.2 93 48.4
Medtr5g054780 Medicago truncatula HOM05D005032 ORTHO05D006268 4.0e-10 68.2 47 76.6
TPR.G38289 Trifolium pratense HOM05D005032 ORTHO05D006268 4.0e-10 68.2 45 77.8
Lalb_Chr02g0146101 Lupinus albus HOM05D005032 ORTHO05D006268 5.2e-10 67.8 78 56.4
VMungo1215G1708 Vigna mungo HOM05D005032 ORTHO05D006268 5.2e-10 67.8 45 77.8
QL01p044542 Quercus lobata HOM05D005032 ORTHO05D006268 6.8e-10 67.4 46 73.9
TPR.G26307 Trifolium pratense HOM05D005032 ORTHO05D006268 6.8e-10 67.4 93 48.4
Ca_11190_v3 Cicer arietinum L. HOM05D005032 ORTHO05D006268 1.2e-09 66.6 93 48.4
Duzib248G0180 Durio zibethinus HOM05D005032 ORTHO05D006268 1.2e-09 66.6 46 71.7
Glyma.20G113500 Glycine max HOM05D005032 ORTHO05D006268 1.2e-09 66.6 46 73.9
Psat2g101480 Pisum sativum HOM05D005032 ORTHO05D006268 1.5e-09 66.2 45 75.6
arahy.Tifrunner.gnm1.ann1.HPX6PX Arachis hypogaea HOM05D005032 ORTHO05D006268 2.0e-09 65.9 46 73.9
arahy.Tifrunner.gnm1.ann1.WF5P9Q Arachis hypogaea HOM05D005032 ORTHO05D006268 2.0e-09 65.9 46 73.9
Oeu004599.1 Olea europaea HOM05D005032 ORTHO05D006268 2.0e-09 65.9 110 44.5
Eucgr.B03034 Eucalyptus grandis HOM05D005032 ORTHO05D006268 2.6e-09 65.5 46 71.7
Lj5g0015640 Lotus japonicus HOM05D005032 ORTHO05D006268 4.4e-09 64.7 46 73.9
Prupe.1G307200 Prunus persica HOM05D005032 ORTHO05D006268 4.4e-09 64.7 46 69.6
Gohir.A12G169300 Gossypium hirsutum HOM05D005032 ORTHO05D006268 7.6e-09 63.9 46 67.4
Gohir.D12G172600 Gossypium hirsutum HOM05D005032 ORTHO05D006268 7.6e-09 63.9 46 67.4
Gorai.008G185100 Gossypium raimondii HOM05D005032 ORTHO05D006268 7.6e-09 63.9 46 67.4
CSS0031703 Camellia sinensis var. sinensis HOM05D005032 ORTHO05D006268 9.9e-09 63.5 46 69.6
CSS0042031 Camellia sinensis var. sinensis HOM05D005032 ORTHO05D006268 9.9e-09 63.5 46 69.6
Manes.14G099000 Manihot esculenta HOM05D005032 ORTHO05D006268 9.9e-09 63.5 46 69.6
ECA234G2686 Erigeron canadensis HOM05D005032 ORTHO05D006268 1.3e-08 63.2 46 69.6
Lsat_1_v5_gn_4_18881 Lactuca sativa HOM05D005032 ORTHO05D006268 1.3e-08 63.2 46 69.6
Sc04g0004960 Simmondsia chinensis HOM05D005032 ORTHO05D006268 1.3e-08 63.2 46 67.4
CiPaw.15G004700 Carya illinoinensis HOM05D005032 ORTHO05D006268 1.7e-08 62.8 85 49.4
Haze_17453 Corylus avellana HOM05D005032 ORTHO05D006268 1.7e-08 62.8 46 67.4
Gohir.A13G053540 Gossypium hirsutum HOM05D005032 ORTHO05D006268 1.7e-08 62.8 46 67.4
Thecc.02G359100 Theobroma cacao HOM05D005032 ORTHO05D006268 1.7e-08 62.8 46 65.2
TWI79G0027 Tripterygium wilfordii HOM05D005032 ORTHO05D006268 1.7e-08 62.8 46 71.7
Actinidia13669 Actinidia chinensis HOM05D005032 ORTHO05D006268 2.2e-08 62.4 46 67.4
HanXRQChr16g0529611 Helianthus annuus HOM05D005032 ORTHO05D006268 2.2e-08 62.4 46 67.4
Potri.008G118200 Populus trichocarpa HOM05D005032 ORTHO05D006268 2.2e-08 62.4 46 67.4
Potri.010G128100 Populus trichocarpa HOM05D005032 ORTHO05D006268 2.2e-08 62.4 46 67.4
Rhsim12G0082300 Rhododendron simsii HOM05D005032 ORTHO05D006268 2.2e-08 62.4 46 67.4
Hund25090 Selenicereus undatus HOM05D005032 ORTHO05D006268 2.2e-08 62.4 133 38.3
ECA246G3837 Erigeron canadensis HOM05D005032 ORTHO05D006268 2.9e-08 62.0 46 67.4
AUR62002904 Chenopodium quinoa HOM05D005032 ORTHO05D006268 3.8e-08 61.6 46 63.0
AUR62035263 Chenopodium quinoa HOM05D005032 ORTHO05D006268 3.8e-08 61.6 46 63.0
Lj6A762T40 Lonicera japonica HOM05D005032 ORTHO05D006268 3.8e-08 61.6 46 67.4
Lj6A763T35 Lonicera japonica HOM05D005032 ORTHO05D006268 3.8e-08 61.6 46 67.4
MD13G1044800 Malus domestica HOM05D005032 ORTHO05D006268 3.8e-08 61.6 46 67.4
MD16G1046200 Malus domestica HOM05D005032 ORTHO05D006268 3.8e-08 61.6 46 67.4
PGSC0003DMG402012961 Solanum tuberosum HOM05D005032 ORTHO05D006268 3.8e-08 61.6 46 67.4
EL10Ac6g14461 Beta vulgaris HOM05D005032 ORTHO05D006268 4.9e-08 61.2 46 65.2
CSS0010323 Camellia sinensis var. sinensis HOM05D005032 ORTHO05D006268 4.9e-08 61.2 46 65.2
CSS0024978 Camellia sinensis var. sinensis HOM05D005032 ORTHO05D006268 4.9e-08 61.2 46 65.2
Ca_19113_v3 Cicer arietinum L. HOM05D005032 ORTHO05D006268 4.9e-08 61.2 45 73.3
Sabra10G0097300 Salix brachista HOM05D005032 ORTHO05D006268 4.9e-08 61.2 46 65.2
TAR374G1139 Trochodendron aralioides HOM05D005032 ORTHO05D006268 4.9e-08 61.2 46 67.4
Cfa018616 Carpinus fangiana HOM05D005032 ORTHO05D006268 6.4e-08 60.8 46 65.2
Gohir.D13G070800 Gossypium hirsutum HOM05D005032 ORTHO05D006268 6.4e-08 60.8 46 65.2
Gorai.013G081000 Gossypium raimondii HOM05D005032 ORTHO05D006268 6.4e-08 60.8 46 65.2
PGR102G0428 Punica granatum HOM05D005032 ORTHO05D006268 6.4e-08 60.8 46 63.0
CiPaw.16G004100 Carya illinoinensis HOM05D005032 ORTHO05D006268 8.4e-08 60.5 46 65.2
Dinv21116 Davidia involucrata HOM05D005032 ORTHO05D006268 8.4e-08 60.5 46 67.4
FvH4_4g27760 Fragaria vesca HOM05D005032 ORTHO05D006268 8.4e-08 60.5 46 65.2
FAN12G2852 Fragaria x ananassa HOM05D005032 ORTHO05D006268 8.4e-08 60.5 46 65.2
Lsat_1_v5_gn_3_59981 Lactuca sativa HOM05D005032 ORTHO05D006268 8.4e-08 60.5 46 65.2
Sabra08G0089600 Salix brachista HOM05D005032 ORTHO05D006268 8.4e-08 60.5 46 65.2
Os02g0580100 Oryza sativa ssp. japonica HOM05D005032 ORTHO05D006268 1.1e-07 60.1 93 45.2
RcHm_v2.0_Chr4g0435621 Rosa chinensis HOM05D005032 ORTHO05D006268 1.1e-07 60.1 46 65.2
THA.LOC104808234 Tarenaya hassleriana HOM05D005032 ORTHO05D006268 1.1e-07 60.1 134 37.3
vmacro01369 Vaccinium macrocarpon HOM05D005032 ORTHO05D006268 1.1e-07 60.1 46 63.0
Zm00001eb245170 Zea mays HOM05D005032 ORTHO05D006268 1.1e-07 60.1 46 67.4
FAN07G0299 Fragaria x ananassa HOM05D005032 ORTHO05D006268 1.4e-07 59.7 46 65.2
FAN22G0537 Fragaria x ananassa HOM05D005032 ORTHO05D006268 1.4e-07 59.7 46 65.2
CDE05G1095 Ceratophyllum demersum HOM05D005032 ORTHO05D006268 1.9e-07 59.3 46 65.2
MELO3C012225.2 Cucumis melo HOM05D005032 ORTHO05D006268 1.9e-07 59.3 46 63.0
CsaV3_5G034080 Cucumis sativus L. HOM05D005032 ORTHO05D006268 1.9e-07 59.3 46 63.0
Peaxi162Scf00380g00811 Petunia axillaris HOM05D005032 ORTHO05D006268 1.9e-07 59.3 46 65.2
GSVIVG01011930001 Vitis vinifera HOM05D005032 ORTHO05D006268 1.9e-07 59.3 46 65.2
Ah.03g137830 Amaranthus hybridus HOM05D005032 ORTHO05D006268 2.4e-07 58.9 46 60.9
arahy.Tifrunner.gnm1.ann1.HVU79Z Arachis hypogaea HOM05D005032 ORTHO05D006268 2.4e-07 58.9 46 58.7
CAN.G656.42 Capsicum annuum HOM05D005032 ORTHO05D006268 2.4e-07 58.9 46 65.2
ClCG05G022930 Citrullus lanatus HOM05D005032 ORTHO05D006268 2.4e-07 58.9 46 63.0
DCAR_026721 Daucus carota HOM05D005032 ORTHO05D006268 2.4e-07 58.9 46 65.2
Nn3g17775 Nelumbo nucifera HOM05D005032 ORTHO05D006268 2.4e-07 58.9 46 65.2
PSO782G1090 Papaver somniferum HOM05D005032 ORTHO05D006268 2.4e-07 58.9 46 63.0
Sed0015336 Sechium edule HOM05D005032 ORTHO05D006268 2.4e-07 58.9 46 63.0
Solyc05g009670.3 Solanum lycopersicum HOM05D005032 ORTHO05D006268 2.4e-07 58.9 46 65.2
Sopen05g005490 Solanum pennellii HOM05D005032 ORTHO05D006268 2.4e-07 58.9 46 65.2
HPP92_006145 Vanilla planifolia HOM05D005032 ORTHO05D006268 2.4e-07 58.9 85 47.1
Aqoxy3G03931 Aquilegia oxysepala HOM05D005032 ORTHO05D006268 3.2e-07 58.5 85 45.9
Migut.E00317 Erythranthe guttata HOM05D005032 ORTHO05D006268 3.2e-07 58.5 46 63.0
MBI13_g09687_MAGBIO Magnolia biondii HOM05D005032 ORTHO05D006268 4.2e-07 58.2 46 65.2
Nitab4.5_0000672g0140 Nicotiana tabacum HOM05D005032 ORTHO05D006268 4.2e-07 58.2 46 63.0
HanXRQChr17g0552231 Helianthus annuus HOM05D005032 ORTHO05D006268 5.4e-07 57.8 46 63.0
PSO063G0757 Papaver somniferum HOM05D005032 ORTHO05D006268 5.4e-07 57.8 43 65.1
Atru.chr11.1329 Acer truncatum HOM05D005032 ORTHO05D006268 7.1e-07 57.4 46 63.0
SalBow8G5398 Salvia bowleyana HOM05D005032 ORTHO05D006268 7.1e-07 57.4 46 63.0
arahy.Tifrunner.gnm1.ann1.P6ZXGF Arachis hypogaea HOM05D005032 ORTHO05D006268 1.2e-06 56.6 46 56.5
Actinidia38384 Actinidia chinensis HOM05D005032 ORTHO05D006268 2.1e-06 55.8 48 62.5
Nitab4.5_0003642g0010 Nicotiana tabacum HOM05D005032 ORTHO05D006268 2.1e-06 55.8 46 60.9
Aa31LG7G9000 Aethionema arabicum HOM05D005032 ORTHO05D006268 3.5e-06 55.1 47 59.6
Ciclev10031322m.g Citrus clementina HOM05D005032 ORTHO05D006268 3.5e-06 55.1 46 60.9
Oeu041892.2 Olea europaea HOM05D005032 ORTHO05D006268 4.6e-06 54.7 46 58.7
ATR0097G002 Amborella trichopoda HOM05D005032 ORTHO05D006268 6.0e-06 54.3 47 57.4
Cc00_g17470 Coffea canephora HOM05D005032 ORTHO05D006268 6.0e-06 54.3 46 58.7
CSS0021499 Camellia sinensis var. sinensis HOM05D005032 ORTHO05D006268 7.8e-06 53.9 93 44.1


User provided reference genes

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