Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr04g0249301 Lupinus albus HOM05D007094 ORTHO05D008264 5.3e-69 264.2 133 100.0
Lalb_Chr17g0347841 Lupinus albus HOM05D007094 ORTHO05D008264 5.1e-48 194.5 118 86.4
Glyma.02G277800 Glycine max HOM05D007094 ORTHO05D008264 2.4e-45 185.7 116 83.6
Glyma.14G036700 Glycine max HOM05D007094 ORTHO05D008264 2.4e-45 185.7 116 84.5
LjContig00564g0008375 Lotus japonicus HOM05D007094 ORTHO05D008264 3.8e-43 178.3 117 79.5
Medtr5g089030 Medicago truncatula HOM05D007094 ORTHO05D008264 1.6e-41 172.9 121 75.2
Psat0s2305g0120 Pisum sativum HOM05D007094 ORTHO05D008264 6.1e-41 171.0 120 74.2
arahy.Tifrunner.gnm1.ann1.WS3KYJ Arachis hypogaea HOM05D007094 ORTHO05D008264 3.9e-40 168.3 118 78.0
arahy.Tifrunner.gnm1.ann1.S7BBNZ Arachis hypogaea HOM05D007094 ORTHO05D008264 1.1e-39 166.8 118 77.1
TPR.G16423 Trifolium pratense HOM05D007094 ORTHO05D008264 4.4e-39 164.9 120 71.7
Phvul.008G203100 Phaseolus vulgaris HOM05D007094 ORTHO05D008264 1.7e-38 162.9 117 76.1
arahy.Tifrunner.gnm1.ann1.MLT6HR Arachis hypogaea HOM05D007094 ORTHO05D008264 4.5e-36 154.8 119 70.6
VMungo0647G0750 Vigna mungo HOM05D007094 ORTHO05D008264 2.2e-35 152.5 132 65.2
CiPaw.14G110600 Carya illinoinensis HOM05D007094 ORTHO05D008264 1.6e-33 146.4 115 67.8
Dinv22210 Davidia involucrata HOM05D007094 ORTHO05D008264 1.4e-32 143.3 116 66.4
Prupe.6G146500 Prunus persica HOM05D007094 ORTHO05D008264 5.2e-32 141.4 118 66.1
Gohir.A09G108300 Gossypium hirsutum HOM05D007094 ORTHO05D008264 4.4e-31 138.3 114 62.3
QL01p016497 Quercus lobata HOM05D007094 ORTHO05D008264 4.8e-30 134.8 118 66.9
QL01p024141 Quercus lobata HOM05D007094 ORTHO05D008264 4.8e-30 134.8 118 66.9
MD11G1174500 Malus domestica HOM05D007094 ORTHO05D008264 6.3e-30 134.4 118 62.7
RcHm_v2.0_Chr5g0048901 Rosa chinensis HOM05D007094 ORTHO05D008264 8.3e-30 134.0 118 64.4
Haze_23270 Corylus avellana HOM05D007094 ORTHO05D008264 1.8e-29 132.9 117 65.0
Cfa003293 Carpinus fangiana HOM05D007094 ORTHO05D008264 2.4e-29 132.5 117 66.7
FvH4_3g26230 Fragaria vesca HOM05D007094 ORTHO05D008264 5.3e-29 131.3 118 61.9
FAN11G3047 Fragaria x ananassa HOM05D007094 ORTHO05D008264 5.3e-29 131.3 118 61.9
FAN25G3244 Fragaria x ananassa HOM05D007094 ORTHO05D008264 7.0e-29 131.0 118 61.0
Gorai.006G122200 Gossypium raimondii HOM05D007094 ORTHO05D008264 3.5e-28 128.6 115 60.0
Gohir.D09G105400 Gossypium hirsutum HOM05D007094 ORTHO05D008264 1.3e-27 126.7 115 59.1
Manes.01G177900 Manihot esculenta HOM05D007094 ORTHO05D008264 1.7e-27 126.3 119 58.0
Rhsim13G0205900 Rhododendron simsii HOM05D007094 ORTHO05D008264 1.7e-27 126.3 122 58.2
Duzib170G0850 Durio zibethinus HOM05D007094 ORTHO05D008264 1.1e-26 123.6 116 58.6
GSVIVG01037355001 Vitis vinifera HOM05D007094 ORTHO05D008264 1.9e-26 122.9 116 59.5
Ciclev10017201m.g Citrus clementina HOM05D007094 ORTHO05D008264 4.2e-26 121.7 116 58.6
Migut.D00679 Erythranthe guttata HOM05D007094 ORTHO05D008264 4.2e-26 121.7 115 55.7
Cpa.g.sc743.4 Carica papaya HOM05D007094 ORTHO05D008264 7.2e-26 120.9 121 60.3
Nn7g36894 Nelumbo nucifera HOM05D007094 ORTHO05D008264 1.6e-25 119.8 116 56.9
Duzib168G1032 Durio zibethinus HOM05D007094 ORTHO05D008264 1.0e-24 117.1 116 56.0
Sed0011068 Sechium edule HOM05D007094 ORTHO05D008264 1.0e-24 117.1 114 57.0
Thecc.09G254700 Theobroma cacao HOM05D007094 ORTHO05D008264 1.0e-24 117.1 116 56.9
MSTRG.21339 Avicennia marina HOM05D007094 ORTHO05D008264 1.8e-24 116.3 118 56.8
Sc16g0010910 Simmondsia chinensis HOM05D007094 ORTHO05D008264 1.8e-24 116.3 115 54.8
Atru.chr3.2855 Acer truncatum HOM05D007094 ORTHO05D008264 2.3e-24 115.9 115 59.1
Atru.chr3.2857 Acer truncatum HOM05D007094 ORTHO05D008264 2.3e-24 115.9 115 59.1
PSO339G5619 Papaver somniferum HOM05D007094 ORTHO05D008264 2.3e-24 115.9 118 55.1
CANSAT54G2518 Cannabis sativa HOM05D007094 ORTHO05D008264 8.8e-24 114.0 116 50.0
PSO384G3224 Papaver somniferum HOM05D007094 ORTHO05D008264 1.2e-23 113.6 118 53.4
Aqoxy2G00509 Aquilegia oxysepala HOM05D007094 ORTHO05D008264 1.5e-23 113.2 114 54.4
THA.LOC104811204 Tarenaya hassleriana HOM05D007094 ORTHO05D008264 1.5e-23 113.2 115 55.7
Oeu001497.1 Olea europaea HOM05D007094 ORTHO05D008264 2.0e-23 112.8 115 58.3
PGR119G0280 Punica granatum HOM05D007094 ORTHO05D008264 2.6e-23 112.5 115 52.2
TWI31G1326 Tripterygium wilfordii HOM05D007094 ORTHO05D008264 2.6e-23 112.5 119 56.3
ClCG02G022690 Citrullus lanatus HOM05D007094 ORTHO05D008264 3.4e-23 112.1 114 54.4
MSTRG.21340 Avicennia marina HOM05D007094 ORTHO05D008264 1.3e-22 110.2 114 52.6
Potri.009G069000 Populus trichocarpa HOM05D007094 ORTHO05D008264 1.3e-22 110.2 130 51.5
Actinidia06990 Actinidia chinensis HOM05D007094 ORTHO05D008264 1.7e-22 109.8 116 53.4
COL.COLO4_24933 Corchorus olitorius HOM05D007094 ORTHO05D008264 2.2e-22 109.4 118 55.9
MBI13_g09208_MAGBIO Magnolia biondii HOM05D007094 ORTHO05D008264 2.2e-22 109.4 116 51.7
Ah.04g159660 Amaranthus hybridus HOM05D007094 ORTHO05D008264 8.3e-22 107.5 115 50.4
FAN21G1281 Fragaria x ananassa HOM05D007094 ORTHO05D008264 8.3e-22 107.5 100 60.0
Duzib150G1213 Durio zibethinus HOM05D007094 ORTHO05D008264 1.1e-21 107.1 115 54.8
C03p06400 Brassica napus HOM05D007094 ORTHO05D008264 1.4e-21 106.7 134 49.3
BcaB01g05415 Brassica carinata HOM05D007094 ORTHO05D008264 1.8e-21 106.3 120 52.5
DCAR_029904 Daucus carota HOM05D007094 ORTHO05D008264 4.1e-21 105.1 95 57.9
A03p05490 Brassica napus HOM05D007094 ORTHO05D008264 7.0e-21 104.4 118 51.7
BraA03t09887Z Brassica rapa HOM05D007094 ORTHO05D008264 7.0e-21 104.4 118 51.7
TAR633G0748 Trochodendron aralioides HOM05D007094 ORTHO05D008264 7.0e-21 104.4 100 58.0
Potri.001G274400 Populus trichocarpa HOM05D007094 ORTHO05D008264 9.1e-21 104.0 118 53.4
Cc01_g06340 Coffea canephora HOM05D007094 ORTHO05D008264 1.2e-20 103.6 115 48.7
HPP92_015618 Vanilla planifolia HOM05D007094 ORTHO05D008264 2.0e-20 102.8 116 49.1
Lj1A303G25 Lonicera japonica HOM05D007094 ORTHO05D008264 2.7e-20 102.4 76 67.1
SGA_v2.0_scaffold29G12215 Striga asiatica HOM05D007094 ORTHO05D008264 3.5e-20 102.1 101 52.5
ATR0307G079 Amborella trichopoda HOM05D007094 ORTHO05D008264 4.5e-20 101.7 107 49.5
EL10Ac4g10089 Beta vulgaris HOM05D007094 ORTHO05D008264 1.3e-19 100.1 117 52.1
Lj1A294T17 Lonicera japonica HOM05D007094 ORTHO05D008264 1.7e-19 99.8 73 68.5
Carub.0006s1075 Capsella rubella HOM05D007094 ORTHO05D008264 2.9e-19 99.0 117 50.4
MELO3C014546.2 Cucumis melo HOM05D007094 ORTHO05D008264 2.9e-19 99.0 99 56.6
Aa31LG3G14990 Aethionema arabicum HOM05D007094 ORTHO05D008264 3.8e-19 98.6 114 48.2
unitig_52.g16873 Utricularia gibba HOM05D007094 ORTHO05D008264 5.0e-19 98.2 115 49.6
CARHR200870 Cardamine hirsuta HOM05D007094 ORTHO05D008264 6.6e-19 97.8 112 48.2
Sabra16G0168900 Salix brachista HOM05D007094 ORTHO05D008264 8.6e-19 97.4 136 45.6
CDE04G2345 Ceratophyllum demersum HOM05D007094 ORTHO05D008264 1.5e-18 96.7 120 49.2
AT5G12240 Arabidopsis thaliana HOM05D007094 ORTHO05D008264 3.3e-18 95.5 116 47.4
Lsat_1_v5_gn_2_26200 Lactuca sativa HOM05D007094 ORTHO05D008264 2.1e-17 92.8 116 47.4
BolC9t59296H Brassica oleracea HOM05D007094 ORTHO05D008264 1.8e-16 89.7 120 45.8
ECA238G4818 Erigeron canadensis HOM05D007094 ORTHO05D008264 2.3e-16 89.4 116 44.8
Sopen11g024820 Solanum pennellii HOM05D007094 ORTHO05D008264 4.0e-16 88.6 117 42.7
Zm00001eb329040 Zea mays HOM05D007094 ORTHO05D008264 5.2e-16 88.2 114 43.9
PGSC0003DMG402031249 Solanum tuberosum HOM05D007094 ORTHO05D008264 6.8e-16 87.8 117 42.7
CAN.G1167.7 Capsicum annuum HOM05D007094 ORTHO05D008264 5.7e-15 84.7 114 40.4
Solyc11g065080.2 Solanum lycopersicum HOM05D007094 ORTHO05D008264 1.3e-14 83.6 115 41.7
Zm00001eb110280 Zea mays HOM05D007094 ORTHO05D008264 2.2e-14 82.8 116 43.1
BraA10t44623Z Brassica rapa HOM05D007094 ORTHO05D008264 2.8e-14 82.4 116 43.1
Eucgr.J00674 Eucalyptus grandis HOM05D007094 ORTHO05D008264 1.8e-13 79.7 92 47.8
A10p25550 Brassica napus HOM05D007094 ORTHO05D008264 7.0e-13 77.8 116 44.8
Hund21962 Selenicereus undatus HOM05D007094 ORTHO05D008264 1.2e-12 77.0 203 32.0
Peaxi162Scf00004g04119 Petunia axillaris HOM05D007094 ORTHO05D008264 2.0e-12 76.3 95 45.3
BolC3t13146H Brassica oleracea HOM05D000282 ORTHO05D000272 3.5e-12 75.5 77 53.2
vmacro08628 Vaccinium macrocarpon HOM05D007094 ORTHO05D008264 3.5e-12 75.5 84 48.8
Oeu032576.1 Olea europaea HOM05D007094 ORTHO05D008264 5.9e-12 74.7 51 66.7
HanXRQChr12g0381391 Helianthus annuus HOM05D007094 ORTHO05D008264 2.9e-11 72.4 100 44.0
Nitab4.5_0004018g0040 Nicotiana tabacum HOM05D007094 ORTHO05D008264 3.9e-11 72.0 87 47.1
Pp3c24_4990 Physcomitrium patens HOM05D007094 ORTHO05D008264 4.3e-10 68.6 117 33.3
Hma1.2p1_0460F.1_g157640 Hydrangea macrophylla HOM05D007094 ORTHO05D008264 7.3e-10 67.8 110 43.6
CDE02G1487 Ceratophyllum demersum HOM05D004500 ORTHO05D028702 4.7e-09 65.1 56 58.9
Os07g0641800 Oryza sativa ssp. japonica HOM05D007094 ORTHO05D008264 1.4e-08 63.5 50 60.0
Haze_25678 Corylus avellana HOM05D007094 ORTHO05D008264 1.8e-08 63.2 117 42.7
AagrBONN_evm.TU.Sc2ySwM_368.1089 Anthoceros agrestis HOM05D007094 ORTHO05D008264 5.2e-08 61.6 124 34.7
SalBow6G5897 Salvia bowleyana HOM05D007094 ORTHO05D008264 5.8e-07 58.2 55 50.9
Peaxi162Scf00032g02018 Petunia axillaris HOM05D021104 ORTHO05D008264 7.5e-07 57.8 84 39.3
Mapoly0029s0132 Marchantia polymorpha HOM05D001703 ORTHO05D005708 2.2e-06 56.2 118 33.1
Sed0018655 Sechium edule HOM05D007094 ORTHO05D008264 2.2e-06 56.2 59 54.2
DCAR_029979 Daucus carota HOM05D007094 ORTHO05D008264 6.4e-06 54.7 66 47.0


User provided reference genes

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