Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr04g0248381 Lupinus albus HOM05D006843 ORTHO05D008517 4.6e-197 691.0 349 100.0
Glyma.14G022900 Glycine max HOM05D006843 ORTHO05D008517 3.8e-159 565.1 351 82.3
Glyma.02G291800 Glycine max HOM05D006843 ORTHO05D008517 7.9e-157 557.4 351 81.8
VMungo0647G1675 Vigna mungo HOM05D006843 ORTHO05D008517 3.3e-155 552.0 351 81.8
Phvul.008G268300 Phaseolus vulgaris HOM05D006843 ORTHO05D008517 5.7e-155 551.2 349 81.7
arahy.Tifrunner.gnm1.ann1.0IA02T Arachis hypogaea HOM05D006843 ORTHO05D008517 1.0e-151 540.4 350 79.1
arahy.Tifrunner.gnm1.ann1.57CCTN Arachis hypogaea HOM05D006843 ORTHO05D008517 1.0e-151 540.4 350 79.1
arahy.Tifrunner.gnm1.ann1.BV1YAY Arachis hypogaea HOM05D006843 ORTHO05D008517 1.0e-151 540.4 350 79.1
arahy.Tifrunner.gnm1.ann1.H57FKH Arachis hypogaea HOM05D006843 ORTHO05D008517 1.0e-151 540.4 350 79.1
arahy.Tifrunner.gnm1.ann1.Q92UKX Arachis hypogaea HOM05D006843 ORTHO05D008517 1.0e-151 540.4 350 79.1
LjContig00272g0007634 Lotus japonicus HOM05D006843 ORTHO05D008517 1.3e-151 540.0 354 79.1
arahy.Tifrunner.gnm1.ann1.J1CT6Y Arachis hypogaea HOM05D006843 ORTHO05D008517 1.9e-150 536.2 350 78.9
Ca_06326_v3 Cicer arietinum L. HOM05D006843 ORTHO05D008517 1.9e-150 536.2 349 79.7
TPR.G1211 Trifolium pratense HOM05D006843 ORTHO05D008517 6.1e-149 531.2 347 76.9
Psat2g011720 Pisum sativum HOM05D006843 ORTHO05D008517 9.7e-147 523.9 345 77.1
Medtr5g092970 Medicago truncatula HOM05D006843 ORTHO05D008517 1.2e-144 516.9 355 74.9
GSVIVG01037656001 Vitis vinifera HOM05D006843 ORTHO05D008517 3.0e-124 449.1 348 64.4
QL08p010009 Quercus lobata HOM05D006843 ORTHO05D008517 2.0e-123 446.4 347 66.9
Thecc.07G035800 Theobroma cacao HOM05D006843 ORTHO05D008517 4.4e-123 445.3 348 66.4
Prupe.4G214500 Prunus persica HOM05D006843 ORTHO05D008517 9.8e-123 444.1 343 65.9
CiPaw.11G190100 Carya illinoinensis HOM05D006843 ORTHO05D008517 2.2e-122 443.0 347 66.3
Gohir.A01G079900 Gossypium hirsutum HOM05D006843 ORTHO05D008517 3.7e-122 442.2 348 64.1
Cfa020337 Carpinus fangiana HOM05D006843 ORTHO05D008517 1.8e-121 439.9 348 65.8
Gohir.D01G067100 Gossypium hirsutum HOM05D006843 ORTHO05D008517 2.4e-121 439.5 348 64.4
CSS0043197 Camellia sinensis var. sinensis HOM05D006843 ORTHO05D008517 1.2e-120 437.2 354 63.6
Haze_09681 Corylus avellana HOM05D006843 ORTHO05D008517 2.0e-120 436.4 348 65.8
Gorai.002G089000 Gossypium raimondii HOM05D006843 ORTHO05D008517 1.7e-119 433.3 348 63.8
Duzib268G1400 Durio zibethinus HOM05D006843 ORTHO05D008517 2.3e-119 433.0 348 63.8
Rhsim06G0217400 Rhododendron simsii HOM05D006843 ORTHO05D008517 8.6e-119 431.0 350 62.6
Actinidia05093 Actinidia chinensis HOM05D006843 ORTHO05D008517 2.5e-118 429.5 349 63.6
CANSAT11G0475 Cannabis sativa HOM05D006843 ORTHO05D008517 5.6e-118 428.3 348 63.2
Manes.03G129700 Manihot esculenta HOM05D006843 ORTHO05D008517 4.7e-117 425.2 348 62.9
MELO3C013160.2 Cucumis melo HOM05D006843 ORTHO05D008517 5.2e-116 421.8 316 67.1
ClCG09G010830 Citrullus lanatus HOM05D006843 ORTHO05D008517 1.5e-115 420.2 310 67.7
TWI39G1240 Tripterygium wilfordii HOM05D006843 ORTHO05D008517 2.6e-115 419.5 353 62.3
CsaV3_7G021850 Cucumis sativus L. HOM05D006843 ORTHO05D008517 3.4e-115 419.1 311 68.2
Eucgr.F00758 Eucalyptus grandis HOM05D006843 ORTHO05D008517 7.5e-115 417.9 354 62.1
CiPaw.12G130200 Carya illinoinensis HOM05D006843 ORTHO05D008517 9.8e-115 417.5 350 63.1
PGR083G2310 Punica granatum HOM05D006843 ORTHO05D008517 1.7e-114 416.8 357 61.1
Cpa.g.sc12.302 Carica papaya HOM05D006843 ORTHO05D008517 3.7e-114 415.6 352 61.4
MD11G1217200 Malus domestica HOM05D006843 ORTHO05D008517 5.4e-113 411.8 348 62.6
TAR624G1415 Trochodendron aralioides HOM05D006843 ORTHO05D008517 2.7e-112 409.5 348 60.9
Cc05_g13830 Coffea canephora HOM05D006843 ORTHO05D008517 3.5e-112 409.1 334 59.9
Dinv22258 Davidia involucrata HOM05D006843 ORTHO05D008517 3.5e-112 409.1 340 61.5
Ciclev10008752m.g Citrus clementina HOM05D006843 ORTHO05D008517 2.3e-111 406.4 357 59.4
Hma1.2p1_0673F.1_g201400 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 3.3e-110 402.5 303 64.7
Nitab4.5_0003495g0070 Nicotiana tabacum HOM05D006843 ORTHO05D008517 9.5e-110 401.0 350 59.7
Sc03g0008560 Simmondsia chinensis HOM05D006843 ORTHO05D008517 9.5e-110 401.0 343 59.8
MSTRG.6924 Avicennia marina HOM05D006843 ORTHO05D008517 1.2e-109 400.6 348 58.9
MBI18_g14135_MAGBIO Magnolia biondii HOM05D006843 ORTHO05D008517 2.1e-109 399.8 350 59.4
Potri.011G090700 Populus trichocarpa HOM05D006843 ORTHO05D008517 2.1e-109 399.8 360 57.5
RcHm_v2.0_Chr5g0040061 Rosa chinensis HOM05D006843 ORTHO05D008517 1.0e-108 397.5 352 59.1
Nn1g03519 Nelumbo nucifera HOM05D006843 ORTHO05D008517 2.0e-107 393.3 349 57.9
Ah.04g165900 Amaranthus hybridus HOM05D006843 ORTHO05D008517 3.4e-107 392.5 349 58.5
A03p56990 Brassica napus HOM05D006843 ORTHO05D008517 5.8e-107 391.7 343 60.1
Thhalv10025611m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 7.5e-107 391.3 344 59.0
HanXRQChr11g0337271 Helianthus annuus HOM05D006843 ORTHO05D008517 2.9e-106 389.4 352 58.5
Sabra11G0086300 Salix brachista HOM05D006843 ORTHO05D008517 3.7e-106 389.0 356 58.1
THA.LOC104809268 Tarenaya hassleriana HOM05D006843 ORTHO05D008517 8.3e-106 387.9 348 57.8
FAN25G2076 Fragaria x ananassa HOM05D006843 ORTHO05D008517 2.4e-105 386.3 302 63.6
FvH4_3g22820 Fragaria vesca HOM05D006843 ORTHO05D008517 9.2e-105 384.4 344 59.3
Carub.0007s1386 Capsella rubella HOM05D006843 ORTHO05D008517 1.6e-104 383.6 340 59.7
AUR62015782 Chenopodium quinoa HOM05D006843 ORTHO05D008517 2.7e-104 382.9 344 58.7
Peaxi162Scf00235g00218 Petunia axillaris HOM05D006843 ORTHO05D008517 2.7e-104 382.9 309 61.8
AT4G26980 Arabidopsis thaliana HOM05D006843 ORTHO05D008517 7.8e-104 381.3 339 58.7
Nitab4.5_0007360g0010 Nicotiana tabacum HOM05D006843 ORTHO05D008517 1.7e-103 380.2 299 61.5
C07p55080 Brassica napus HOM05D006843 ORTHO05D008517 5.0e-103 378.6 344 57.8
CARHR234590 Cardamine hirsuta HOM05D006843 ORTHO05D008517 5.0e-103 378.6 343 58.0
PGSC0003DMG402022316 Solanum tuberosum HOM05D006843 ORTHO05D008517 5.0e-103 378.6 305 62.6
Aa31LG5G10440 Aethionema arabicum HOM05D006843 ORTHO05D008517 1.1e-102 377.5 343 57.1
Sed0013659 Sechium edule HOM05D006843 ORTHO05D008517 1.1e-102 377.5 332 59.3
FAN16G2069 Fragaria x ananassa HOM05D006843 ORTHO05D008517 2.5e-102 376.3 347 58.5
BcaC06g32719 Brassica carinata HOM05D006843 ORTHO05D008517 5.6e-102 375.2 344 58.4
ECA236G1023 Erigeron canadensis HOM05D006843 ORTHO05D008517 1.6e-101 373.6 304 62.8
AL7G25850 Arabidopsis lyrata HOM05D006843 ORTHO05D008517 3.6e-101 372.5 340 57.6
Solyc07g064630.4 Solanum lycopersicum HOM05D006843 ORTHO05D008517 3.6e-101 372.5 305 62.3
Aqoxy4G01855 Aquilegia oxysepala HOM05D006843 ORTHO05D008517 4.7e-101 372.1 355 55.2
Lsat_1_v5_gn_7_109981 Lactuca sativa HOM05D006843 ORTHO05D008517 4.7e-101 372.1 303 63.4
Migut.M01756 Erythranthe guttata HOM05D006843 ORTHO05D008517 1.1e-100 370.9 355 56.1
Sopen07g032830 Solanum pennellii HOM05D006843 ORTHO05D008517 2.2e-98 363.2 312 60.3
EL10Ac4g07802 Beta vulgaris HOM05D006843 ORTHO05D008517 7.1e-97 358.2 408 50.2
DCAR_012722 Daucus carota HOM05D006843 ORTHO05D008517 1.0e-95 354.4 347 55.3
SGA_v2.0_scaffold165G38275 Striga asiatica HOM05D006843 ORTHO05D008517 1.0e-95 354.4 317 56.5
Hma1.2p1_0673F.1_g201390 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 2.8e-93 346.3 304 58.2
Lj8A169G88 Lonicera japonica HOM05D006843 ORTHO05D008517 1.2e-91 340.9 304 58.2
HPP92_013325 Vanilla planifolia HOM05D006843 ORTHO05D008517 1.3e-90 337.4 307 55.4
BraA03t14769Z Brassica rapa HOM05D006843 ORTHO05D008517 3.2e-89 332.8 271 62.7
CAN.G337.136 Capsicum annuum HOM05D006843 ORTHO05D008517 5.4e-89 332.0 267 59.9
BolC7t46005H Brassica oleracea HOM05D006843 ORTHO05D008517 7.8e-88 328.2 269 61.3
unitig_8.g4621 Utricularia gibba HOM05D006843 ORTHO05D008517 2.3e-87 326.6 335 52.8
Zm00001eb224560 Zea mays HOM05D006843 ORTHO05D008517 1.6e-80 303.9 266 55.6
PSO063G3629 Papaver somniferum HOM05D006843 ORTHO05D008517 1.3e-79 300.8 348 47.4
PSO170G2271 Papaver somniferum HOM05D006843 ORTHO05D008517 8.7e-79 298.1 300 51.0
AUR62020435 Chenopodium quinoa HOM05D006843 ORTHO05D008517 3.6e-77 292.7 407 45.9
Zm00001eb273720 Zea mays HOM05D006843 ORTHO05D008517 1.1e-76 291.2 271 54.6
Mapoly0001s0246 Marchantia polymorpha HOM05D006843 ORTHO05D008517 3.8e-74 282.7 319 49.5
Pp3c9_17980 Physcomitrium patens HOM05D006843 ORTHO05D008517 4.9e-74 282.3 310 51.3
Thhalv10026846m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 2.8e-61 240.0 266 50.4
CBR_g34195 Chara braunii HOM05D006843 ORTHO05D008517 3.4e-59 233.0 387 37.7
Psat5g064560 Pisum sativum HOM05D006843 ORTHO05D008517 5.5e-57 225.7 140 80.0
Psat4g156200 Pisum sativum HOM05D006843 ORTHO05D008517 1.6e-56 224.2 140 80.0
Psat7g029280 Pisum sativum HOM05D006843 ORTHO05D008517 4.6e-56 222.6 140 78.6
Hund02000 Selenicereus undatus HOM05D006843 ORTHO05D008517 1.3e-53 214.5 214 56.1
SMO234G0011 Selaginella moellendorffii HOM05D006843 ORTHO05D008517 5.3e-52 209.1 253 47.8
Atru.chr2.3418 Acer truncatum HOM05D006843 ORTHO05D008517 1.6e-48 197.6 133 68.4
ATR0490G005 Amborella trichopoda HOM05D006843 ORTHO05D008517 2.5e-46 190.3 184 53.8
vmacro11722 Vaccinium macrocarpon HOM05D006843 ORTHO05D008517 3.1e-44 183.3 187 52.4
Os06g0679700 Oryza sativa ssp. japonica HOM05D006843 ORTHO05D008517 7.4e-38 162.2 164 50.6
Dinv20052 Davidia involucrata HOM05D002890 ORTHO05D005855 2.2e-37 160.6 121 65.3
Haze_01866 Corylus avellana HOM05D006843 ORTHO05D008517 1.4e-36 157.9 193 50.3
Psat3g185160 Pisum sativum HOM05D006843 ORTHO05D008517 9.4e-33 145.2 111 68.5
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 4.7e-32 142.9 101 72.3
CDE02G2447 Ceratophyllum demersum HOM05D006843 ORTHO05D008517 4.1e-28 129.8 246 36.2
MCO05G180 Micromonas commoda HOM05D006843 ORTHO05D008517 5.5e-25 119.4 190 35.8
Psat7g126680 Pisum sativum HOM05D006843 ORTHO05D008517 5.0e-18 96.3 62 80.6
Dinv20053 Davidia involucrata HOM05D006843 ORTHO05D008517 4.8e-13 79.7 115 41.7
ATR0926G001 Amborella trichopoda HOM05D006843 ORTHO05D008517 1.2e-08 65.1 56 57.1
Cre01.g054650 Chlamydomonas reinhardtii HOM05D006843 ORTHO05D008517 2.0e-06 57.8 96 32.3


User provided reference genes

Program Settings