Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr04g0248281 Lupinus albus HOM05D007542 ORTHO05D009519 3.9e-94 348.2 185 100.0
Medtr5g093430 Medicago truncatula HOM05D007542 ORTHO05D009519 2.5e-48 196.1 194 64.4
LjContig00272g0021523 Lotus japonicus HOM05D007542 ORTHO05D009519 3.2e-48 195.7 194 63.9
Glyma.18G092800 Glycine max HOM05D007542 ORTHO05D009519 2.8e-44 182.6 188 62.8
Phvul.006G046800 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 1.4e-43 180.3 186 61.8
TPR.G1179 Trifolium pratense HOM05D007542 ORTHO05D009519 3.4e-42 175.6 195 57.4
Glyma.08G319700 Glycine max HOM05D007542 ORTHO05D009519 4.5e-42 175.3 188 61.2
Medtr5g093440 Medicago truncatula HOM05D007542 ORTHO05D009519 5.9e-42 174.9 192 58.9
TAR643G0006 Trochodendron aralioides HOM05D007542 ORTHO05D009519 5.0e-41 171.8 192 55.7
Hma1.2p1_1332F.1_g276050 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 8.5e-41 171.0 190 55.3
Lj6g0015208 Lotus japonicus HOM05D007542 ORTHO05D009519 8.5e-41 171.0 183 56.8
Glyma.14G021700 Glycine max HOM05D007542 ORTHO05D009519 1.1e-40 170.6 186 60.8
Duzib170G0581 Durio zibethinus HOM05D007542 ORTHO05D009519 1.4e-40 170.2 184 55.4
Manes.03G133100 Manihot esculenta HOM05D007542 ORTHO05D009519 2.5e-40 169.5 195 52.8
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 7.2e-40 167.9 191 59.2
Cpa.g.sc12.265 Carica papaya HOM05D007542 ORTHO05D009519 1.2e-39 167.2 192 54.2
QL08p006891 Quercus lobata HOM05D007542 ORTHO05D009519 1.2e-39 167.2 198 54.5
TPR.G17892 Trifolium pratense HOM05D007542 ORTHO05D009519 1.6e-39 166.8 191 56.0
CSS0027066 Camellia sinensis var. sinensis HOM05D007542 ORTHO05D009519 2.1e-39 166.4 194 55.2
Thecc.07G031100 Theobroma cacao HOM05D007542 ORTHO05D009519 3.6e-39 165.6 188 55.3
Psat2g012400 Pisum sativum HOM05D007542 ORTHO05D009519 4.6e-39 165.2 191 59.7
Ca_06340_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 6.1e-39 164.9 185 56.2
Prupe.4G220300 Prunus persica HOM05D007542 ORTHO05D009519 1.0e-38 164.1 201 54.7
arahy.Tifrunner.gnm1.ann1.C8UBJW Arachis hypogaea HOM05D007542 ORTHO05D009519 1.8e-38 163.3 178 58.4
Psat2g012360 Pisum sativum HOM05D007542 ORTHO05D009519 1.8e-38 163.3 191 57.6
Ciclev10009585m.g Citrus clementina HOM05D007542 ORTHO05D009519 2.3e-38 162.9 183 55.7
Gorai.002G092100 Gossypium raimondii HOM05D007542 ORTHO05D009519 2.3e-38 162.9 185 53.5
arahy.Tifrunner.gnm1.ann1.T42YYR Arachis hypogaea HOM05D007542 ORTHO05D009519 3.0e-38 162.5 179 58.7
Gohir.D01G069700 Gossypium hirsutum HOM05D007542 ORTHO05D009519 1.1e-37 160.6 185 53.0
Sabra11G0071000 Salix brachista HOM05D007542 ORTHO05D009519 1.1e-37 160.6 192 52.6
GSVIVG01037700001 Vitis vinifera HOM05D007542 ORTHO05D009519 1.5e-37 160.2 195 53.8
Nn1g03444 Nelumbo nucifera HOM05D007542 ORTHO05D009519 3.3e-37 159.1 204 52.0
Potri.011G087000 Populus trichocarpa HOM05D007542 ORTHO05D009519 2.2e-36 156.4 196 52.0
Cfa020302 Carpinus fangiana HOM05D007542 ORTHO05D009519 1.1e-35 154.1 192 52.1
Phvul.008G269700 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 1.8e-35 153.3 192 53.6
Lj6g0001233 Lotus japonicus HOM05D007542 ORTHO05D009519 3.1e-35 152.5 232 47.8
COL.COLO4_09703 Corchorus olitorius HOM05D007542 ORTHO05D009519 4.1e-35 152.1 194 50.0
VMungo0647G1207 Vigna mungo HOM05D007542 ORTHO05D009519 6.9e-35 151.4 192 52.1
RcHm_v2.0_Chr5g0040991 Rosa chinensis HOM05D007542 ORTHO05D009519 9.1e-35 151.0 206 49.0
TWI38G0725 Tripterygium wilfordii HOM05D007542 ORTHO05D009519 2.0e-34 149.8 190 54.2
CsaV3_3G004930 Cucumis sativus L. HOM05D007542 ORTHO05D009519 1.3e-33 147.1 190 48.9
MELO3C014190.2 Cucumis melo HOM05D007542 ORTHO05D009519 1.7e-33 146.7 187 48.1
FAN16G3720 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.7e-33 146.7 208 46.6
FAN21G0453 Fragaria x ananassa HOM05D007542 ORTHO05D009519 2.2e-33 146.4 208 47.1
FAN25G0364 Fragaria x ananassa HOM05D007542 ORTHO05D009519 2.9e-33 146.0 198 49.0
FAN25G1685 Fragaria x ananassa HOM05D007542 ORTHO05D009519 2.9e-33 146.0 198 49.0
Prupe.4G220200 Prunus persica HOM05D007542 ORTHO05D009519 2.9e-33 146.0 200 49.0
arahy.Tifrunner.gnm1.ann1.ENS6UV Arachis hypogaea HOM05D007542 ORTHO05D009519 5.0e-33 145.2 187 52.9
FvH4_3g23270 Fragaria vesca HOM05D007542 ORTHO05D009519 5.0e-33 145.2 208 46.2
MD03G1195800 Malus domestica HOM05D007542 ORTHO05D009519 5.0e-33 145.2 198 48.0
Atru.chr2.3499 Acer truncatum HOM05D007542 ORTHO05D009519 1.1e-32 144.1 214 47.7
CiPaw.11G192900 Carya illinoinensis HOM05D007542 ORTHO05D009519 1.1e-32 144.1 199 51.3
Dinv40786 Davidia involucrata HOM05D007542 ORTHO05D009519 2.5e-32 142.9 187 48.1
Eucgr.F00716 Eucalyptus grandis HOM05D007542 ORTHO05D009519 7.2e-32 141.4 203 46.3
Nitab4.5_0000328g0130 Nicotiana tabacum HOM05D007542 ORTHO05D009519 7.2e-32 141.4 191 52.4
Cc05_g14120 Coffea canephora HOM05D007542 ORTHO05D009519 1.6e-31 140.2 203 47.3
MD11G1212200 Malus domestica HOM05D007542 ORTHO05D009519 2.1e-31 139.8 198 48.0
MSTRG.6947 Avicennia marina HOM05D007542 ORTHO05D009519 4.7e-31 138.7 188 47.3
TAR626G0917 Trochodendron aralioides HOM05D007542 ORTHO05D009519 7.9e-31 137.9 181 50.3
FAN11G1962 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.8e-30 136.7 198 46.5
Ca_25812_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 3.9e-30 135.6 188 51.1
DCAR_016720 Daucus carota HOM05D007542 ORTHO05D009519 1.1e-29 134.0 200 47.0
Aqoxy1G03049 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 4.4e-29 132.1 198 46.5
Actinidia05075 Actinidia chinensis HOM05D007542 ORTHO05D009519 1.3e-28 130.6 174 51.1
PGSC0003DMG400014384 Solanum tuberosum HOM05D007542 ORTHO05D009519 8.2e-28 127.9 220 44.1
TAR624G0015 Trochodendron aralioides HOM05D007542 ORTHO05D009519 1.1e-27 127.5 183 47.5
Medtr3g053160 Medicago truncatula HOM05D007542 ORTHO05D009519 3.1e-27 125.9 193 48.2
CAN.G492.20 Capsicum annuum HOM05D007542 ORTHO05D009519 5.9e-26 121.7 214 44.4
Oeu026398.1 Olea europaea HOM05D007542 ORTHO05D009519 7.7e-26 121.3 188 45.2
Hma1.2p1_3935F.1_g338010 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 1.1e-24 117.5 137 53.3
MBI10_g09179_MAGBIO Magnolia biondii HOM05D007542 ORTHO05D009519 2.5e-24 116.3 184 45.1
Nn1g07236 Nelumbo nucifera HOM05D007542 ORTHO05D009519 4.2e-24 115.5 203 42.4
Rhsim06G0222000 Rhododendron simsii HOM05D007542 ORTHO05D009519 4.2e-24 115.5 194 47.4
Nitab4.5_0002826g0080 Nicotiana tabacum HOM05D007542 ORTHO05D009519 7.2e-24 114.8 188 45.2
Sopen07g033030 Solanum pennellii HOM05D007542 ORTHO05D009519 7.2e-24 114.8 188 41.5
Solyc10g006150.3 Solanum lycopersicum HOM05D007542 ORTHO05D009519 6.1e-23 111.7 217 39.6
VMungo0540G1120 Vigna mungo HOM05D007542 ORTHO05D009519 1.8e-22 110.2 183 43.2
MSTRG.12988 Avicennia marina HOM05D007542 ORTHO05D009519 9.7e-21 104.4 183 41.0
Migut.H01805 Erythranthe guttata HOM05D007542 ORTHO05D009519 9.7e-21 104.4 188 40.4
CAN.G337.69 Capsicum annuum HOM05D007542 ORTHO05D009519 2.2e-20 103.2 183 43.7
PSO541G2394 Papaver somniferum HOM05D007542 ORTHO05D009519 2.8e-20 102.8 224 36.6
Sc16g0005830 Simmondsia chinensis HOM05D007542 ORTHO05D009519 4.8e-20 102.1 186 40.9
Oeu008012.1 Olea europaea HOM05D007542 ORTHO05D009519 8.2e-20 101.3 184 40.2
Peaxi162Scf00235g00059 Petunia axillaris HOM05D007542 ORTHO05D009519 1.8e-19 100.1 181 38.1
PGSC0003DMG400022335 Solanum tuberosum HOM05D007542 ORTHO05D009519 1.8e-19 100.1 172 44.8
Sc03g0008420 Simmondsia chinensis HOM05D007542 ORTHO05D009519 3.1e-19 99.4 182 42.9
Gohir.A01G083201 Gossypium hirsutum HOM05D007542 ORTHO05D009519 5.9e-18 95.1 89 56.2
Aqoxy1G03452 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 6.5e-17 91.7 141 39.7
EL10Ac4g07752 Beta vulgaris HOM05D007542 ORTHO05D009519 6.1e-15 85.1 202 36.1
Glyma.02G293000 Glycine max HOM05D007542 ORTHO05D009519 1.0e-14 84.3 171 43.3
Manes.15G067900 Manihot esculenta HOM05D007542 ORTHO05D009519 1.0e-14 84.3 144 44.4
Sopen10g002100 Solanum pennellii HOM05D007542 ORTHO05D009519 3.4e-13 79.3 94 51.1
Lj1P878T38 Lonicera japonica HOM05D007542 ORTHO05D009519 1.3e-12 77.4 158 40.5
CDE08G0529 Ceratophyllum demersum HOM05D007542 ORTHO05D009519 4.1e-11 72.4 87 46.0
Nitab4.5_0004829g0120 Nicotiana tabacum HOM05D007542 ORTHO05D009519 2.0e-10 70.1 175 34.3


User provided reference genes

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