Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr04g0248161 Lupinus albus HOM05D006019 ORTHO05D007900 7.0e-309 1063.1 551 100.0
VMungo0647G0128 Vigna mungo HOM05D006019 ORTHO05D007900 6.5e-238 827.4 543 80.3
LjContig00272g0018197 Lotus japonicus HOM05D006019 ORTHO05D007900 2.6e-234 815.5 546 79.7
Phvul.008G272400 Phaseolus vulgaris HOM05D006019 ORTHO05D007900 3.3e-234 815.1 546 79.3
Glyma.02G294900 Glycine max HOM05D006019 ORTHO05D007900 3.1e-232 808.5 547 78.6
Glyma.14G018700 Glycine max HOM05D006019 ORTHO05D007900 1.7e-230 802.7 550 78.2
TPR.G35353 Trifolium pratense HOM05D006019 ORTHO05D007900 3.7e-225 785.0 542 76.8
Medtr5g093830 Medicago truncatula HOM05D006019 ORTHO05D007900 2.2e-222 775.8 541 75.6
Psat2g009800 Pisum sativum HOM05D006019 ORTHO05D007900 1.3e-217 760.0 539 73.3
Ca_06346_v3 Cicer arietinum L. HOM05D006019 ORTHO05D007900 5.5e-213 744.6 439 85.4
QL08p020269 Quercus lobata HOM05D006019 ORTHO05D007900 8.0e-212 740.7 538 71.0
arahy.Tifrunner.gnm1.ann1.G2L6CM Arachis hypogaea HOM05D006019 ORTHO05D007900 2.3e-211 739.2 459 82.8
CSS0042888 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 2.0e-210 736.1 545 70.1
CSS0000535 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 2.2e-209 732.6 544 69.5
GSVIVG01037722001 Vitis vinifera HOM05D006019 ORTHO05D007900 4.8e-209 731.5 523 71.1
Potri.015G065900 Populus trichocarpa HOM05D006019 ORTHO05D007900 1.8e-208 729.6 527 71.3
TAR629G1914 Trochodendron aralioides HOM05D006019 ORTHO05D007900 4.1e-208 728.4 539 70.3
Atru.chr2.3529 Acer truncatum HOM05D006019 ORTHO05D007900 1.2e-207 726.9 503 73.2
Sabra15G0091100 Salix brachista HOM05D006019 ORTHO05D007900 1.6e-207 726.5 527 71.2
CiPaw.11G172700 Carya illinoinensis HOM05D006019 ORTHO05D007900 1.0e-206 723.8 495 74.5
Actinidia35369 Actinidia chinensis HOM05D006019 ORTHO05D007900 2.9e-206 722.2 471 75.6
Eucgr.F03504 Eucalyptus grandis HOM05D006019 ORTHO05D007900 5.0e-206 721.5 550 69.3
Atru.chr2.3549 Acer truncatum HOM05D006019 ORTHO05D007900 1.9e-205 719.5 549 69.4
RcHm_v2.0_Chr5g0041541 Rosa chinensis HOM05D006019 ORTHO05D007900 7.2e-205 717.6 535 69.7
Haze_09462 Corylus avellana HOM05D006019 ORTHO05D007900 2.3e-203 712.6 536 70.5
Manes.03G136600 Manihot esculenta HOM05D006019 ORTHO05D007900 2.3e-203 712.6 543 68.1
ClCG10G005120 Citrullus lanatus HOM05D006019 ORTHO05D007900 8.8e-203 710.7 524 70.6
vmacro09689 Vaccinium macrocarpon HOM05D006019 ORTHO05D007900 1.5e-202 709.9 471 74.1
Ciclev10007944m.g Citrus clementina HOM05D006019 ORTHO05D007900 2.6e-202 709.1 544 68.0
Dinv22232 Davidia involucrata HOM05D006019 ORTHO05D007900 2.6e-202 709.1 528 71.0
FAN21G2609 Fragaria x ananassa HOM05D006019 ORTHO05D007900 7.5e-202 707.6 533 68.9
MELO3C014178.2 Cucumis melo HOM05D006019 ORTHO05D007900 1.7e-201 706.4 526 69.8
Duzib213G0195 Durio zibethinus HOM05D006019 ORTHO05D007900 2.8e-201 705.7 545 67.0
Peaxi162Scf00235g00727 Petunia axillaris HOM05D006019 ORTHO05D007900 2.8e-201 705.7 537 68.0
Thecc.07G028300 Theobroma cacao HOM05D006019 ORTHO05D007900 6.3e-201 704.5 542 67.9
CANSAT11G1049 Cannabis sativa HOM05D006019 ORTHO05D007900 1.1e-200 703.7 557 65.7
CsaV3_3G004800 Cucumis sativus L. HOM05D006019 ORTHO05D007900 1.8e-200 703.0 524 69.5
Prupe.4G223000 Prunus persica HOM05D006019 ORTHO05D007900 3.1e-200 702.2 538 68.6
PGR031G3909 Punica granatum HOM05D006019 ORTHO05D007900 7.0e-200 701.0 541 67.5
MD11G1209500 Malus domestica HOM05D006019 ORTHO05D007900 1.7e-198 696.4 538 68.6
Gorai.002G093600 Gossypium raimondii HOM05D006019 ORTHO05D007900 2.3e-198 696.0 520 68.8
COL.COLO4_09733 Corchorus olitorius HOM05D006019 ORTHO05D007900 3.8e-198 695.3 547 66.0
Gohir.A01G084500 Gossypium hirsutum HOM05D006019 ORTHO05D007900 6.6e-198 694.5 544 66.7
Nitab4.5_0000984g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 6.6e-198 694.5 547 66.9
Nn1g07344 Nelumbo nucifera HOM05D006019 ORTHO05D007900 8.6e-198 694.1 544 66.5
arahy.Tifrunner.gnm1.ann1.PR9FWM Arachis hypogaea HOM05D006019 ORTHO05D007900 1.1e-197 693.7 459 78.4
FAN25G1378 Fragaria x ananassa HOM05D006019 ORTHO05D007900 1.5e-197 693.3 538 68.0
Gohir.D01G070900 Gossypium hirsutum HOM05D006019 ORTHO05D007900 1.5e-197 693.3 520 68.7
Sed0026759 Sechium edule HOM05D006019 ORTHO05D007900 1.6e-196 689.9 474 73.0
Nitab4.5_0002826g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 6.1e-196 688.0 487 71.7
CAN.G337.58 Capsicum annuum HOM05D006019 ORTHO05D007900 3.0e-195 685.6 543 65.2
Oeu026379.1 Olea europaea HOM05D006019 ORTHO05D007900 2.0e-194 682.9 472 71.2
Cpa.g.sc284.5 Carica papaya HOM05D006019 ORTHO05D007900 7.5e-194 681.0 560 64.8
Cc05_g14300 Coffea canephora HOM05D006019 ORTHO05D007900 1.3e-193 680.2 531 65.2
Sopen07g033150 Solanum pennellii HOM05D006019 ORTHO05D007900 1.2e-191 673.7 539 64.7
Lj1C880T10 Lonicera japonica HOM05D006019 ORTHO05D007900 1.6e-191 673.3 526 67.9
PGSC0003DMG400022300 Solanum tuberosum HOM05D006019 ORTHO05D007900 1.6e-191 673.3 544 63.6
THA.LOC104817684 Tarenaya hassleriana HOM05D006019 ORTHO05D007900 4.6e-191 671.8 471 70.7
Migut.M01708 Erythranthe guttata HOM05D006019 ORTHO05D007900 1.0e-190 670.6 550 64.2
FvH4_3g23540 Fragaria vesca HOM05D006019 ORTHO05D007900 2.3e-190 669.5 511 69.3
Solyc07g064950.3 Solanum lycopersicum HOM05D006019 ORTHO05D007900 3.0e-190 669.1 533 64.4
DCAR_017106 Daucus carota HOM05D006019 ORTHO05D007900 4.3e-189 665.2 441 73.5
TWI39G1205 Tripterygium wilfordii HOM05D006019 ORTHO05D007900 2.8e-188 662.5 481 69.2
ECA240G2757 Erigeron canadensis HOM05D006019 ORTHO05D007900 6.2e-188 661.4 537 62.4
Lsat_1_v5_gn_9_90660 Lactuca sativa HOM05D006019 ORTHO05D007900 8.9e-187 657.5 535 62.2
HanXRQChr13g0408251 Helianthus annuus HOM05D006019 ORTHO05D007900 2.6e-186 656.0 537 61.5
MBI19_g29437_MAGBIO Magnolia biondii HOM05D006019 ORTHO05D007900 1.3e-185 653.7 534 65.0
Aqoxy1G02863 Aquilegia oxysepala HOM05D006019 ORTHO05D007900 5.4e-184 648.3 463 69.5
FAN16G2690 Fragaria x ananassa HOM05D006019 ORTHO05D007900 3.9e-182 642.1 538 64.5
Thhalv10013195m.g Eutrema salsugineum HOM05D006019 ORTHO05D007900 1.5e-181 640.2 472 66.3
Sp6g17150 Schrenkiella parvula HOM05D006019 ORTHO05D007900 1.9e-181 639.8 475 66.3
BcaB05g22192 Brassica carinata HOM05D006019 ORTHO05D007900 3.3e-181 639.0 473 66.0
AL8G30770 Arabidopsis lyrata HOM05D006019 ORTHO05D007900 2.3e-179 632.9 476 65.1
AUR62020342 Chenopodium quinoa HOM05D006019 ORTHO05D007900 2.3e-179 632.9 531 59.7
BolC2t07733H Brassica oleracea HOM05D006019 ORTHO05D007900 5.2e-179 631.7 486 64.6
PSO541G6030 Papaver somniferum HOM05D006019 ORTHO05D007900 6.8e-179 631.3 529 62.4
AT5G55220 Arabidopsis thaliana HOM05D006019 ORTHO05D007900 1.2e-178 630.6 482 64.3
Carub.0008s1557 Capsella rubella HOM05D006019 ORTHO05D007900 2.6e-178 629.4 473 65.8
BraA02t06043Z Brassica rapa HOM05D006019 ORTHO05D007900 4.4e-178 628.6 475 65.5
PSO675G6628 Papaver somniferum HOM05D006019 ORTHO05D007900 4.4e-178 628.6 529 62.2
CARHR268580 Cardamine hirsuta HOM05D006019 ORTHO05D007900 1.7e-177 626.7 482 65.1
EL10Ac4g07692 Beta vulgaris HOM05D006019 ORTHO05D007900 2.2e-177 626.3 576 58.5
Rhsim04G0016400 Rhododendron simsii HOM05D006019 ORTHO05D000403 1.4e-176 623.6 554 61.9
Aa31LG3G11210 Aethionema arabicum HOM05D006019 ORTHO05D007900 2.1e-175 619.8 543 60.4
HanXRQChr03g0076861 Helianthus annuus HOM05D006019 ORTHO05D007900 1.7e-174 616.7 500 60.6
ATR1128G029 Amborella trichopoda HOM05D006019 ORTHO05D007900 2.9e-169 599.4 443 66.6
A02p09780 Brassica napus HOM05D006019 ORTHO05D000403 1.7e-166 590.1 449 65.0
C02p16310 Brassica napus HOM05D006019 ORTHO05D000403 8.6e-166 587.8 523 60.4
AUR62015881 Chenopodium quinoa HOM05D006019 ORTHO05D007900 2.5e-165 586.3 503 58.6
Ah.06g182250 Amaranthus hybridus HOM05D006019 ORTHO05D007900 5.6e-165 585.1 547 56.3
Hund01957 Selenicereus undatus HOM05D006019 ORTHO05D007900 5.8e-162 575.1 548 57.8
BcaC03g14251 Brassica carinata HOM05D006019 ORTHO05D007900 3.5e-159 565.8 473 60.7
Os06g0308000 Oryza sativa ssp. japonica HOM05D006019 ORTHO05D007900 5.6e-157 558.5 450 60.2
Zm00001eb405570 Zea mays HOM05D006019 ORTHO05D007900 6.0e-151 538.5 453 56.5
SGA_v2.0_scaffold171G38908 Striga asiatica HOM05D006019 ORTHO05D007900 5.1e-150 535.4 494 58.1
SalBow8G4839 Salvia bowleyana HOM05D006019 ORTHO05D007900 1.6e-148 530.4 528 55.3
Sc16g0005740 Simmondsia chinensis HOM05D006019 ORTHO05D007900 6.2e-148 528.5 487 59.8
unitig_22.g6170 Utricularia gibba HOM05D006019 ORTHO05D007900 1.4e-147 527.3 373 70.2
BcaC03g14252 Brassica carinata HOM05D006019 ORTHO05D007900 1.3e-137 494.2 368 64.9
CDE04G0522 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 4.6e-135 485.7 409 61.6
SEGI_28230 Sequoiadendron giganteum HOM05D006019 ORTHO05D007900 7.4e-133 478.4 470 50.0
FAN11G0939 Fragaria x ananassa HOM05D006019 ORTHO05D007900 2.6e-130 469.9 374 66.0
Mapoly0157s0020 Marchantia polymorpha HOM05D006019 ORTHO05D007900 1.9e-125 453.8 466 48.9
Pp3c2_30270 Physcomitrium patens HOM05D006019 ORTHO05D007900 8.2e-124 448.4 527 44.4
AagrBONN_evm.TU.Sc2ySwM_228.3732 Anthoceros agrestis HOM05D006019 ORTHO05D007900 3.1e-123 446.4 468 48.5
Pp3c11_10950 Physcomitrium patens HOM05D006019 ORTHO05D007900 3.1e-123 446.4 485 46.4
FAN25G3210 Fragaria x ananassa HOM05D006019 ORTHO05D007900 6.9e-115 418.7 450 55.6
CBR_g21850 Chara braunii HOM05D006019 ORTHO05D007900 2.2e-113 413.7 475 44.0
SMO361G0007 Selaginella moellendorffii HOM05D006019 ORTHO05D007900 1.1e-107 394.8 439 44.6
MCO13G367 Micromonas commoda HOM05D006019 ORTHO05D007900 1.1e-72 278.5 465 34.6
PRCOL_00002693 Prasinoderma coloniale HOM05D006019 ORTHO05D007900 6.2e-63 246.1 424 33.0
VMungo0464G1494 Vigna mungo HOM05D006019 ORTHO05D007900 2.1e-58 231.1 151 78.1
Glyma.14G020800 Glycine max HOM05D006019 ORTHO05D007900 2.5e-56 224.2 136 83.1
A10p12490 Brassica napus HOM05D006019 ORTHO05D007900 5.4e-51 206.5 383 39.4
Oeu026380.1 Olea europaea HOM05D006019 ORTHO05D007900 6.0e-42 176.4 139 64.7
HPP92_015779 Vanilla planifolia HOM05D006019 ORTHO05D007900 4.0e-38 163.7 249 38.6
TAR720G0004 Trochodendron aralioides HOM05D006019 ORTHO05D007900 9.0e-38 162.5 107 76.6
Glyma.14G020666 Glycine max HOM05D006019 ORTHO05D007900 3.0e-33 147.5 92 80.4
Cre01.g001750 Chlamydomonas reinhardtii HOM05D006019 ORTHO05D007900 3.3e-32 144.1 465 24.3
VMungo0647G0792 Vigna mungo HOM05D006019 ORTHO05D007900 8.1e-31 139.4 94 80.9
CDE04G2936 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 9.6e-24 115.9 68 80.9
Hma1.2p1_4091F.1_g338270 Hydrangea macrophylla HOM05D006019 ORTHO05D007900 1.1e-22 112.5 113 59.3
BraA10t43342Z Brassica rapa HOM05D006019 ORTHO05D007900 1.1e-19 102.4 208 34.1
C09p45770 Brassica napus HOM05D006019 ORTHO05D007900 3.2e-19 100.9 230 32.6
BolC9t57451H Brassica oleracea HOM05D006019 ORTHO05D007900 1.2e-18 99.0 205 32.7
C09p45760 Brassica napus HOM05D006019 ORTHO05D007900 5.7e-16 90.1 108 50.0
BcaC04g20257 Brassica carinata HOM05D006019 ORTHO05D007900 2.9e-12 77.8 79 55.7
Ca_29171_v3 Cicer arietinum L. HOM05D006019 ORTHO05D003051 7.9e-10 69.7 461 21.5
unitig_22.g6169 Utricularia gibba HOM05D006019 ORTHO05D007900 3.0e-09 67.8 134 38.1
BraA02t07229Z Brassica rapa HOM05D011432 ORTHO05D014939 5.3e-06 57.0 40 65.0


User provided reference genes

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