Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr04g0247881 Lupinus albus HOM05D005924 ORTHO05D007290 1.4e-75 286.2 144 100.0
Phvul.008G278700 Phaseolus vulgaris HOM05D005924 ORTHO05D007290 8.3e-52 207.2 144 77.1
arahy.Tifrunner.gnm1.ann1.7P25LN Arachis hypogaea HOM05D005924 ORTHO05D007290 2.4e-51 205.7 144 75.0
arahy.Tifrunner.gnm1.ann1.RJW0MD Arachis hypogaea HOM05D005924 ORTHO05D007290 2.4e-51 205.7 144 75.0
Glyma.02G300000 Glycine max HOM05D005924 ORTHO05D007290 4.1e-51 204.9 133 79.7
Ca_06392_v3 Cicer arietinum L. HOM05D005924 ORTHO05D007290 6.0e-50 201.1 145 74.5
Duzib213G0633 Durio zibethinus HOM05D005924 ORTHO05D007290 1.0e-49 200.3 142 71.1
Glyma.14G013900 Glycine max HOM05D005924 ORTHO05D007290 2.3e-49 199.1 144 74.3
VMungo0647G1823 Vigna mungo HOM05D005924 ORTHO05D007290 5.0e-49 198.0 144 75.7
CSS0023895 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 8.6e-49 197.2 143 72.7
Lj6g0020710 Lotus japonicus HOM05D005924 ORTHO05D007290 1.1e-48 196.8 142 76.8
Psat2g007680 Pisum sativum HOM05D000001 ORTHO05D000003 2.8e-47 192.2 144 72.2
Medtr5g095700 Medicago truncatula HOM05D005924 ORTHO05D007290 1.1e-46 190.3 146 71.2
COL.COLO4_09820 Corchorus olitorius HOM05D005924 ORTHO05D007290 1.8e-46 189.5 143 68.5
Thecc.07G014800 Theobroma cacao HOM05D005924 ORTHO05D007290 3.1e-46 188.7 142 67.6
Ciclev10009817m.g Citrus clementina HOM05D005924 ORTHO05D007290 6.8e-46 187.6 144 71.5
Gohir.D05G383300 Gossypium hirsutum HOM05D005924 ORTHO05D007290 6.8e-46 187.6 143 69.9
CSS0025987 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 8.9e-46 187.2 145 67.6
CSS0049690 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 8.9e-46 187.2 145 67.6
TPR.G8617 Trifolium pratense HOM05D005924 ORTHO05D007290 8.9e-46 187.2 147 72.1
Manes.15G060600 Manihot esculenta HOM05D005924 ORTHO05D007290 1.5e-45 186.4 144 70.1
SGA_v2.0_scaffold8G04406 Striga asiatica HOM05D005924 ORTHO05D007290 1.5e-45 186.4 144 68.1
Dinv10325 Davidia involucrata HOM05D005924 ORTHO05D007290 2.0e-45 186.0 149 71.1
Gohir.A04G006200 Gossypium hirsutum HOM05D005924 ORTHO05D007290 4.4e-45 184.9 143 68.5
TWI38G0037 Tripterygium wilfordii HOM05D005924 ORTHO05D007290 6.4e-44 181.0 148 64.2
GSVIVG01014668001 Vitis vinifera HOM05D005924 ORTHO05D007290 6.4e-44 181.0 143 72.0
QL11p054318 Quercus lobata HOM05D005924 ORTHO05D007290 8.3e-44 180.6 143 68.5
Sabra16G0240500 Salix brachista HOM05D005924 ORTHO05D007290 8.3e-44 180.6 145 68.3
QL08p004337 Quercus lobata HOM05D005924 ORTHO05D007290 1.9e-43 179.5 143 67.8
Cfa020200 Carpinus fangiana HOM05D005924 ORTHO05D007290 4.1e-43 178.3 144 68.1
TWI39G1162 Tripterygium wilfordii HOM05D005924 ORTHO05D007290 7.0e-43 177.6 148 66.2
MSTRG.13019 Avicennia marina HOM05D005924 ORTHO05D007290 9.2e-43 177.2 144 66.7
Haze_09815 Corylus avellana HOM05D005924 ORTHO05D007290 1.2e-42 176.8 144 68.1
Rhsim04G0012900 Rhododendron simsii HOM05D005924 ORTHO05D007290 1.2e-42 176.8 143 65.0
RcHm_v2.0_Chr5g0053761 Rosa chinensis HOM05D005924 ORTHO05D007290 1.2e-42 176.8 149 67.1
Dinv40851 Davidia involucrata HOM05D005924 ORTHO05D007290 1.6e-42 176.4 148 69.6
Cc05_g14880 Coffea canephora HOM05D005924 ORTHO05D007290 3.5e-42 175.3 143 67.1
Hma1.2p1_0036F.1_g022440 Hydrangea macrophylla HOM05D005924 ORTHO05D007290 3.5e-42 175.3 146 66.4
Actinidia30411 Actinidia chinensis HOM05D005924 ORTHO05D007290 4.6e-42 174.9 143 62.9
FAN21G3132 Fragaria x ananassa HOM05D005924 ORTHO05D007290 6.0e-42 174.5 146 64.4
Oeu049375.1 Olea europaea HOM05D005924 ORTHO05D007290 7.8e-42 174.1 145 67.6
CiPaw.12G137600 Carya illinoinensis HOM05D005924 ORTHO05D007290 1.7e-41 172.9 143 67.8
FvH4_3g29370 Fragaria vesca HOM05D005924 ORTHO05D007290 1.7e-41 172.9 146 64.4
FAN11G0697 Fragaria x ananassa HOM05D005924 ORTHO05D007290 1.7e-41 172.9 146 64.4
Oeu057095.1 Olea europaea HOM05D005924 ORTHO05D007290 1.7e-41 172.9 146 67.8
Gorai.009G449900 Gossypium raimondii HOM05D005924 ORTHO05D007290 3.9e-41 171.8 176 56.8
PGR083G1797 Punica granatum HOM05D005924 ORTHO05D007290 1.5e-40 169.9 150 62.7
MD11G1201100 Malus domestica HOM05D005924 ORTHO05D007290 1.9e-40 169.5 143 67.1
Lj8A178T78 Lonicera japonica HOM05D005924 ORTHO05D007290 4.3e-40 168.3 138 65.9
Potri.001G367200 Populus trichocarpa HOM05D005924 ORTHO05D007290 4.3e-40 168.3 145 64.1
Prupe.4G242300 Prunus persica HOM05D005924 ORTHO05D007290 4.3e-40 168.3 143 63.6
MD03G1184300 Malus domestica HOM05D005924 ORTHO05D007290 5.6e-40 167.9 145 64.1
Sed0014433 Sechium edule HOM05D005924 ORTHO05D007290 5.6e-40 167.9 145 66.2
TAR629G1982 Trochodendron aralioides HOM05D001060 ORTHO05D000905 5.6e-40 167.9 144 63.9
FAN25G0770 Fragaria x ananassa HOM05D005924 ORTHO05D007290 9.5e-40 167.2 145 63.4
PGSC0003DMG400022173 Solanum tuberosum HOM05D005924 ORTHO05D007290 9.5e-40 167.2 143 63.6
CiPaw.11G203100 Carya illinoinensis HOM05D005924 ORTHO05D007290 1.2e-39 166.8 142 66.2
EL10Ac4g07594 Beta vulgaris HOM05D005924 ORTHO05D007290 1.6e-39 166.4 145 68.3
ECA246G3128 Erigeron canadensis HOM05D005924 ORTHO05D007290 1.6e-39 166.4 144 61.1
Migut.H01759 Erythranthe guttata HOM05D005924 ORTHO05D007290 2.8e-39 165.6 145 61.4
ClCG09G021250 Citrullus lanatus HOM05D005924 ORTHO05D007290 3.6e-39 165.2 145 66.2
Lsat_1_v5_gn_5_1420 Lactuca sativa HOM05D005924 ORTHO05D007290 3.6e-39 165.2 147 61.9
Cpa.g.sc12.154 Carica papaya HOM05D005924 ORTHO05D007290 4.7e-39 164.9 124 74.2
DCAR_018844 Daucus carota HOM05D005924 ORTHO05D007290 1.1e-38 163.7 130 64.6
Solyc07g065480.3 Solanum lycopersicum HOM05D005924 ORTHO05D007290 1.4e-38 163.3 143 62.9
Eucgr.F02053 Eucalyptus grandis HOM05D005924 ORTHO05D007290 3.1e-38 162.2 144 64.6
Nn1g03196 Nelumbo nucifera HOM05D005924 ORTHO05D007290 3.1e-38 162.2 145 62.8
Actinidia26779 Actinidia chinensis HOM05D005924 ORTHO05D007290 5.2e-38 161.4 143 63.6
Sopen07g033690 Solanum pennellii HOM05D005924 ORTHO05D007290 1.2e-37 160.2 143 61.5
CsaV3_7G015090 Cucumis sativus L. HOM05D005924 ORTHO05D007290 1.5e-37 159.8 145 64.8
Nitab4.5_0014607g0010 Nicotiana tabacum HOM05D005924 ORTHO05D007290 1.5e-37 159.8 145 59.3
vmacro09651 Vaccinium macrocarpon HOM05D005924 ORTHO05D007290 3.4e-37 158.7 143 60.1
Peaxi162Scf01164g00127 Petunia axillaris HOM05D005924 ORTHO05D007290 4.4e-37 158.3 129 64.3
CANSAT11G0122 Cannabis sativa HOM05D005924 ORTHO05D007290 7.5e-37 157.5 152 61.8
PSO302G0279 Papaver somniferum HOM05D005924 ORTHO05D007290 7.5e-37 157.5 145 60.0
Aqoxy1G04252 Aquilegia oxysepala HOM05D005924 ORTHO05D007290 9.9e-37 157.1 144 59.0
Nitab4.5_0000461g0270 Nicotiana tabacum HOM05D005924 ORTHO05D007290 9.9e-37 157.1 145 58.6
PSO210G6324 Papaver somniferum HOM05D005924 ORTHO05D007290 2.2e-36 156.0 145 60.0
Oeu049390.1 Olea europaea HOM05D005924 ORTHO05D007290 3.7e-36 155.2 127 69.3
Sed0006731 Sechium edule HOM05D005924 ORTHO05D007290 3.7e-36 155.2 142 61.3
ATR0624G098 Amborella trichopoda HOM05D005924 ORTHO05D007290 6.4e-36 154.5 144 60.4
Hund23125 Selenicereus undatus HOM05D005924 ORTHO05D007290 1.1e-35 153.7 146 63.0
MELO3C024930.2 Cucumis melo HOM05D005924 ORTHO05D007290 2.4e-35 152.5 145 62.8
AUR62036411 Chenopodium quinoa HOM05D005924 ORTHO05D007290 5.4e-35 151.4 146 62.3
AUR62036442 Chenopodium quinoa HOM05D005924 ORTHO05D007290 7.1e-35 151.0 147 61.2
Sc16g0008020 Simmondsia chinensis HOM05D005924 ORTHO05D007290 7.1e-35 151.0 144 59.0
unitig_0.g996 Utricularia gibba HOM05D005924 ORTHO05D007290 2.7e-34 149.1 146 57.5
MBI19_g12833_MAGBIO Magnolia biondii HOM05D005924 ORTHO05D007290 4.6e-34 148.3 146 58.2
MBI16_g07767_MAGBIO Magnolia biondii HOM05D005924 ORTHO05D007290 7.8e-34 147.5 124 64.5
Actinidia37157 Actinidia chinensis HOM05D005924 ORTHO05D007290 1.7e-33 146.4 124 66.1
HanXRQChr08g0231191 Helianthus annuus HOM05D005924 ORTHO05D007290 2.3e-33 146.0 143 56.6
AUR62017085 Chenopodium quinoa HOM05D005924 ORTHO05D007290 3.9e-33 145.2 147 60.5
Thhalv10014966m.g Eutrema salsugineum HOM05D005924 ORTHO05D007290 2.5e-32 142.5 146 54.8
Sp6g17560 Schrenkiella parvula HOM05D005924 ORTHO05D007290 3.3e-32 142.1 148 57.4
AT5G55640 Arabidopsis thaliana HOM05D005924 ORTHO05D007290 4.3e-32 141.7 147 57.1
Atru.BG.148.p Acer truncatum HOM05D005924 ORTHO05D007290 1.4e-30 136.7 92 79.3
THA.LOC104811656 Tarenaya hassleriana HOM05D005924 ORTHO05D007290 1.4e-30 136.7 149 55.0
Ah.06g181380 Amaranthus hybridus HOM05D000864 ORTHO05D002353 5.2e-30 134.8 123 61.8
Manes.03G140800 Manihot esculenta HOM05D005924 ORTHO05D007290 1.2e-29 133.7 117 67.5
AL8G31220 Arabidopsis lyrata HOM05D005924 ORTHO05D007290 2.6e-29 132.5 133 58.6
Carub.0008s1601 Capsella rubella HOM05D005924 ORTHO05D007290 7.6e-29 131.0 150 54.0
BolC9t57514H Brassica oleracea HOM05D005924 ORTHO05D007290 1.7e-28 129.8 129 55.8
BraA10t43385Z Brassica rapa HOM05D005924 ORTHO05D007290 6.4e-28 127.9 133 56.4
CDE10G1040 Ceratophyllum demersum HOM05D005924 ORTHO05D007290 8.4e-28 127.5 142 52.8
BcaC04g20212 Brassica carinata HOM05D005924 ORTHO05D007290 1.4e-27 126.7 132 56.1
C09p46620 Brassica napus HOM05D005924 ORTHO05D007290 1.4e-27 126.7 132 56.1
A10p12930 Brassica napus HOM05D005924 ORTHO05D007290 3.2e-27 125.6 133 56.4
CDE10G1343 Ceratophyllum demersum HOM05D005924 ORTHO05D007290 9.2e-27 124.0 128 53.1
Aa31LG3G11590 Aethionema arabicum HOM05D005924 ORTHO05D007290 1.6e-26 123.2 152 50.0
BcaB08g35925 Brassica carinata HOM05D005924 ORTHO05D007290 6.0e-26 121.3 127 55.9
SEGI_16066 Sequoiadendron giganteum HOM05D005924 ORTHO05D007290 7.8e-26 120.9 148 49.3
CARHR268960 Cardamine hirsuta HOM05D005924 ORTHO05D007290 2.5e-24 115.9 129 55.8
Os03g0595200 Oryza sativa ssp. japonica HOM05D005924 ORTHO05D007290 3.3e-24 115.5 124 51.6
arahy.Tifrunner.gnm1.ann1.HJ67LJ Arachis hypogaea HOM05D005924 ORTHO05D007290 4.7e-23 111.7 99 65.7
Zm00001eb049780 Zea mays HOM05D005924 ORTHO05D007290 4.7e-23 111.7 129 49.6
QL08p004311 Quercus lobata HOM05D005924 ORTHO05D007290 2.4e-22 109.4 122 52.5
Pp3c6_3770 Physcomitrium patens HOM05D005924 ORTHO05D007290 3.1e-22 109.0 151 43.0
C09p47070 Brassica napus HOM05D005924 ORTHO05D007290 5.2e-22 108.2 125 52.8
Mapoly0038s0106 Marchantia polymorpha HOM05D005924 ORTHO05D007290 5.2e-22 108.2 150 45.3
HPP92_006039 Vanilla planifolia HOM05D005924 ORTHO05D007290 1.5e-21 106.7 98 58.2
Pp3c5_24890 Physcomitrium patens HOM05D005924 ORTHO05D007290 2.6e-21 105.9 150 42.0
TAR626G0711 Trochodendron aralioides HOM05D005924 ORTHO05D007290 2.9e-20 102.4 130 50.8
BcaC04g20171 Brassica carinata HOM05D005924 ORTHO05D007290 4.9e-20 101.7 91 60.4
SMO145G0101 Selaginella moellendorffii HOM05D005924 ORTHO05D007290 4.2e-19 98.6 151 42.4
BolC9t57844H Brassica oleracea HOM05D005924 ORTHO05D007290 5.3e-14 81.6 97 55.7
BcaC04g19914 Brassica carinata HOM05D005924 ORTHO05D007290 1.5e-13 80.1 104 51.0
arahy.Tifrunner.gnm1.ann1.7WZH36 Arachis hypogaea HOM05D005924 ORTHO05D007290 5.8e-13 78.2 55 65.5
Os03g0412200 Oryza sativa ssp. japonica HOM05D005924 ORTHO05D007290 8.4e-12 74.3 111 45.0
PSO210G6050 Papaver somniferum HOM05D000045 ORTHO05D000067 7.4e-08 61.2 83 49.4
Zm00001eb019850 Zea mays HOM05D005924 ORTHO05D007290 7.4e-08 61.2 136 38.2
AagrBONN_evm.TU.Sc2ySwM_340.252 Anthoceros agrestis HOM05D005924 ORTHO05D007290 1.4e-06 57.0 111 41.4
AagrBONN_evm.TU.Sc2ySwM_340.382 Anthoceros agrestis HOM05D005924 ORTHO05D007290 3.1e-06 55.8 150 34.0


User provided reference genes

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