Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr04g0247401 Lupinus albus HOM05D003890 ORTHO05D004514 6.3e-114 414.1 202 100.0
Lalb_Chr04g0247641 Lupinus albus HOM05D003890 ORTHO05D004514 6.3e-114 414.1 202 100.0
Glyma.18G070500 Glycine max HOM05D003890 ORTHO05D004514 2.5e-78 295.8 222 71.2
Glyma.08G335500 Glycine max HOM05D003890 ORTHO05D004514 1.8e-76 289.7 227 70.0
Phvul.006G062600 Phaseolus vulgaris HOM05D003890 ORTHO05D004514 1.8e-76 289.7 223 69.5
Ca_14881_v3 Cicer arietinum L. HOM05D003890 ORTHO05D004514 3.0e-76 288.9 219 68.9
VMungo0540G2384 Vigna mungo HOM05D003890 ORTHO05D004514 2.6e-75 285.8 223 69.5
TPR.G30124 Trifolium pratense HOM05D003890 ORTHO05D004514 1.3e-74 283.5 221 67.0
Psat5g163000 Pisum sativum HOM05D003890 ORTHO05D004514 4.1e-73 278.5 220 65.9
Lj6g0021955 Lotus japonicus HOM05D003890 ORTHO05D004514 1.2e-72 276.9 224 65.6
arahy.Tifrunner.gnm1.ann1.5L0PCQ Arachis hypogaea HOM05D003890 ORTHO05D004514 4.5e-72 275.0 206 68.0
ClCG03G013240 Citrullus lanatus HOM05D003890 ORTHO05D004514 5.9e-72 274.6 222 64.9
Lalb_Chr18g0050551 Lupinus albus HOM05D003890 ORTHO05D004514 7.8e-72 274.2 210 66.7
Duzib170G0856 Durio zibethinus HOM05D003890 ORTHO05D004514 3.9e-71 271.9 226 61.5
Dinv36258 Davidia involucrata HOM05D003890 ORTHO05D004514 6.6e-71 271.2 221 63.8
Thecc.09G233900 Theobroma cacao HOM05D003890 ORTHO05D004514 8.6e-71 270.8 227 62.6
QL01p004686 Quercus lobata HOM05D003890 ORTHO05D004514 1.1e-70 270.4 225 63.6
CsaV3_1G042820 Cucumis sativus L. HOM05D003890 ORTHO05D004514 1.9e-70 269.6 223 62.8
Medtr3g061630 Medicago truncatula HOM05D003890 ORTHO05D004514 1.9e-70 269.6 222 62.2
RcHm_v2.0_Chr5g0052051 Rosa chinensis HOM05D003890 ORTHO05D004514 4.3e-70 268.5 219 63.5
COL.COLO4_07583 Corchorus olitorius HOM05D003890 ORTHO05D004514 7.3e-70 267.7 229 59.4
Haze_23135 Corylus avellana HOM05D000807 ORTHO05D000662 2.1e-69 266.2 227 63.9
TAR636G2753 Trochodendron aralioides HOM05D003890 ORTHO05D004514 2.1e-69 266.2 227 62.6
CiPaw.13G160900 Carya illinoinensis HOM05D003890 ORTHO05D004514 4.7e-69 265.0 226 63.7
Sed0019717 Sechium edule HOM05D003890 ORTHO05D004514 1.0e-68 263.8 223 61.4
Cpa.g.sc84.53 Carica papaya HOM05D003890 ORTHO05D004514 1.8e-68 263.1 221 62.9
FAN11G0759 Fragaria x ananassa HOM05D003890 ORTHO05D004514 1.8e-68 263.1 222 61.7
Duzib150G1364 Durio zibethinus HOM05D003890 ORTHO05D004514 2.3e-68 262.7 229 61.6
Manes.14G002800 Manihot esculenta HOM05D003890 ORTHO05D004514 4.0e-68 261.9 229 61.6
Potri.009G053300 Populus trichocarpa HOM05D003890 ORTHO05D004514 4.0e-68 261.9 223 61.9
FAN21G3604 Fragaria x ananassa HOM05D003890 ORTHO05D004514 5.2e-68 261.5 222 61.3
FAN25G3809 Fragaria x ananassa HOM05D003890 ORTHO05D004514 8.9e-68 260.8 222 61.3
Gohir.D05G072300 Gossypium hirsutum HOM05D003890 ORTHO05D004514 8.9e-68 260.8 228 59.6
Gorai.009G073300 Gossypium raimondii HOM05D003890 ORTHO05D004514 8.9e-68 260.8 228 59.6
TAR633G1481 Trochodendron aralioides HOM05D003890 ORTHO05D004514 8.9e-68 260.8 224 62.5
CiPaw.14G119100 Carya illinoinensis HOM05D003890 ORTHO05D004514 1.5e-67 260.0 227 62.6
Sabra16G0157800 Salix brachista HOM05D003890 ORTHO05D004514 2.0e-67 259.6 226 60.6
Aqoxy2G00137 Aquilegia oxysepala HOM05D003890 ORTHO05D004514 2.6e-67 259.2 212 62.7
FvH4_3g28850 Fragaria vesca HOM05D003890 ORTHO05D004514 2.6e-67 259.2 222 60.8
FAN16G3317 Fragaria x ananassa HOM05D003890 ORTHO05D004514 2.6e-67 259.2 222 60.8
Hma1.2p1_0027F.1_g017050 Hydrangea macrophylla HOM05D003890 ORTHO05D004514 2.6e-67 259.2 221 62.4
Cfa009770 Carpinus fangiana HOM05D003890 ORTHO05D004514 3.4e-67 258.8 227 62.1
Gohir.A05G069400 Gossypium hirsutum HOM05D003890 ORTHO05D004514 3.4e-67 258.8 228 58.8
Atru.chr3.2715 Acer truncatum HOM05D003890 ORTHO05D004514 4.4e-67 258.5 219 63.0
CANSAT56G1539 Cannabis sativa HOM05D003890 ORTHO05D004514 9.8e-67 257.3 231 59.7
Potri.001G258100 Populus trichocarpa HOM05D003890 ORTHO05D004514 2.2e-66 256.1 226 60.2
Phvul.008G283400 Phaseolus vulgaris HOM05D003890 ORTHO05D004514 2.9e-66 255.8 207 64.3
Manes.06G164200 Manihot esculenta HOM05D003890 ORTHO05D004514 6.4e-66 254.6 228 61.8
Actinidia06907 Actinidia chinensis HOM05D003890 ORTHO05D004514 1.1e-65 253.8 215 61.9
Prupe.4G249500 Prunus persica HOM05D003890 ORTHO05D004514 1.1e-65 253.8 226 60.2
Hund07506 Selenicereus undatus HOM05D003890 ORTHO05D004514 3.2e-65 252.3 220 63.6
Glyma.14G009900 Glycine max HOM05D003890 ORTHO05D004514 5.4e-65 251.5 202 65.3
Gohir.D09G111000 Gossypium hirsutum HOM05D003890 ORTHO05D004514 5.4e-65 251.5 214 60.3
Gohir.A09G114300 Gossypium hirsutum HOM05D003890 ORTHO05D004514 1.6e-64 250.0 214 59.8
Actinidia16334 Actinidia chinensis HOM05D003890 ORTHO05D004514 2.0e-64 249.6 215 61.9
Gorai.006G128600 Gossypium raimondii HOM05D003890 ORTHO05D004514 2.0e-64 249.6 214 59.8
Nn2g15369 Nelumbo nucifera HOM05D003890 ORTHO05D004514 2.7e-64 249.2 222 60.8
Sabra09G0038800 Salix brachista HOM05D003890 ORTHO05D004514 2.7e-64 249.2 219 60.3
AUR62019304 Chenopodium quinoa HOM05D003890 ORTHO05D004514 3.5e-64 248.8 224 60.7
EL10Ac4g10247 Beta vulgaris HOM05D003890 ORTHO05D004514 6.0e-64 248.1 223 59.6
MD03G1175000 Malus domestica HOM05D003890 ORTHO05D004514 7.8e-64 247.7 222 59.9
Hund22030 Selenicereus undatus HOM05D003890 ORTHO05D004514 1.0e-63 247.3 210 63.8
PGR102G1724 Punica granatum HOM05D003890 ORTHO05D004514 2.3e-63 246.1 236 56.4
Ciclev10016574m.g Citrus clementina HOM05D003890 ORTHO05D004514 3.9e-63 245.4 227 58.1
MD11G1193100 Malus domestica HOM05D003890 ORTHO05D004514 3.9e-63 245.4 223 59.6
DCAR_002072 Daucus carota HOM05D003890 ORTHO05D004514 5.0e-63 245.0 210 60.5
VMungo0647G1030 Vigna mungo HOM05D003890 ORTHO05D004514 5.0e-63 245.0 207 61.4
Lj1A330T24 Lonicera japonica HOM05D003890 ORTHO05D004514 8.6e-63 244.2 213 60.1
arahy.Tifrunner.gnm1.ann1.HEYT23 Arachis hypogaea HOM05D003890 ORTHO05D004514 5.6e-62 241.5 208 62.0
THA.LOC104807531 Tarenaya hassleriana HOM05D003890 ORTHO05D004514 5.6e-62 241.5 216 58.8
Sopen11g025500 Solanum pennellii HOM05D003890 ORTHO05D004514 1.6e-61 240.0 212 59.0
TWI60G0796 Tripterygium wilfordii HOM05D003890 ORTHO05D004514 2.1e-61 239.6 209 60.3
PSO384G2797 Papaver somniferum HOM05D003890 ORTHO05D004514 3.6e-61 238.8 223 58.3
Solyc11g065740.2 Solanum lycopersicum HOM05D003890 ORTHO05D004514 4.7e-61 238.4 212 58.5
Rhsim01G0191800 Rhododendron simsii HOM05D003890 ORTHO05D004514 6.2e-61 238.0 212 59.9
THA.LOC104811066 Tarenaya hassleriana HOM05D003890 ORTHO05D004514 6.2e-61 238.0 215 58.1
GSVIVG01025257001 Vitis vinifera HOM05D003890 ORTHO05D004514 6.2e-61 238.0 168 71.4
ATR0332G008 Amborella trichopoda HOM05D003890 ORTHO05D004514 1.1e-60 237.3 222 61.3
MBI04_g36752_MAGBIO Magnolia biondii HOM05D003890 ORTHO05D004514 3.1e-60 235.7 231 56.7
TWI32G0323 Tripterygium wilfordii HOM05D003890 ORTHO05D004514 4.0e-60 235.3 210 60.0
Cc10_g03220 Coffea canephora HOM05D003890 ORTHO05D004514 6.8e-60 234.6 221 56.6
Oeu001480.1 Olea europaea HOM05D003890 ORTHO05D004514 1.2e-59 233.8 216 58.8
PGSC0003DMG400007341 Solanum tuberosum HOM05D003890 ORTHO05D004514 1.2e-59 233.8 212 57.5
Aa31LG4G8640 Aethionema arabicum HOM05D003890 ORTHO05D004514 2.0e-59 233.0 203 58.1
ECA240G2592 Erigeron canadensis HOM05D003890 ORTHO05D004514 2.0e-59 233.0 213 56.3
Dinv09354 Davidia involucrata HOM05D003890 ORTHO05D004514 4.4e-59 231.9 221 55.7
MBI02_g05665_MAGBIO Magnolia biondii HOM05D003890 ORTHO05D004514 5.8e-59 231.5 224 54.0
Eucgr.J00766 Eucalyptus grandis HOM05D003890 ORTHO05D004514 9.8e-59 230.7 210 59.0
Lsat_1_v5_gn_1_66000 Lactuca sativa HOM05D003890 ORTHO05D004514 9.8e-59 230.7 212 59.0
BcaB08g36566 Brassica carinata HOM05D003890 ORTHO05D004514 2.2e-58 229.6 209 58.4
ClCG02G023230 Citrullus lanatus HOM05D003890 ORTHO05D004514 6.4e-58 228.0 214 58.4
C03p11250 Brassica napus HOM05D003890 ORTHO05D004514 1.9e-57 226.5 209 56.9
BcaB01g04825 Brassica carinata HOM05D003890 ORTHO05D004514 2.4e-57 226.1 209 56.9
BolC3t13596H Brassica oleracea HOM05D003890 ORTHO05D004514 2.4e-57 226.1 209 56.9
AT5G19855 Arabidopsis thaliana HOM05D003890 ORTHO05D004514 3.2e-57 225.7 197 59.4
A03p09680 Brassica napus HOM05D003890 ORTHO05D004514 3.2e-57 225.7 209 56.9
SGA_v2.0_scaffold8G04590 Striga asiatica HOM05D003890 ORTHO05D004514 3.2e-57 225.7 213 55.9
MSTRG.21378 Avicennia marina HOM05D003890 ORTHO05D004514 1.2e-56 223.8 212 56.1
Ah.04g161930 Amaranthus hybridus HOM05D003890 ORTHO05D004514 2.1e-56 223.0 224 55.4
CAN.G599.2 Capsicum annuum HOM05D003890 ORTHO05D004514 2.1e-56 223.0 206 56.8
Cc02_g28010 Coffea canephora HOM05D003890 ORTHO05D004514 4.6e-56 221.9 205 56.6
Nitab4.5_0001587g0060 Nicotiana tabacum HOM05D003890 ORTHO05D004514 4.6e-56 221.9 222 54.5
Oeu016684.1 Olea europaea HOM05D003890 ORTHO05D004514 4.6e-56 221.9 214 57.5
Nitab4.5_0002741g0130 Nicotiana tabacum HOM05D003890 ORTHO05D004514 1.0e-55 220.7 222 54.1
HanXRQChr02g0056201 Helianthus annuus HOM05D003890 ORTHO05D004514 1.3e-55 220.3 207 55.1
CARHR193020 Cardamine hirsuta HOM05D003890 ORTHO05D004514 3.9e-55 218.8 183 60.7
GSVIVG01032095001 Vitis vinifera HOM05D003890 ORTHO05D004514 3.9e-55 218.8 141 73.8
Lsat_1_v5_gn_6_47921 Lactuca sativa HOM05D003890 ORTHO05D004514 5.1e-55 218.4 207 57.0
BNapus_Darmor_BZH_scaffold_38p02060 Brassica napus HOM05D003890 ORTHO05D004514 6.6e-55 218.0 209 56.5
MELO3C014593.2 Cucumis melo HOM05D003890 ORTHO05D004514 6.6e-55 218.0 159 67.9
PGR119G1229 Punica granatum HOM05D003890 ORTHO05D004514 1.5e-54 216.9 171 62.0
BcaC03g13717 Brassica carinata HOM05D003890 ORTHO05D004514 1.9e-54 216.5 209 55.0
Carub.0006s1821 Capsella rubella HOM05D003890 ORTHO05D004514 1.9e-54 216.5 201 57.7
arahy.Tifrunner.gnm1.ann1.13C5F2 Arachis hypogaea HOM05D003890 ORTHO05D004514 2.5e-54 216.1 211 60.2
BraA03t10284Z Brassica rapa HOM05D003890 ORTHO05D004514 2.5e-54 216.1 223 53.4
AL6G31380 Arabidopsis lyrata HOM05D003890 ORTHO05D004514 4.3e-54 215.3 201 57.2
BcaB01g04844 Brassica carinata HOM05D003890 ORTHO05D004514 5.6e-54 214.9 166 63.3
CsaV3_4G024270 Cucumis sativus L. HOM05D003890 ORTHO05D004514 7.3e-54 214.5 195 56.9
ECA233G4357 Erigeron canadensis HOM05D003890 ORTHO05D004514 7.3e-54 214.5 205 54.1
Sed0005000 Sechium edule HOM05D003890 ORTHO05D004514 9.5e-54 214.2 159 67.3
vmacro12718 Vaccinium macrocarpon HOM05D003890 ORTHO05D004514 9.5e-54 214.2 243 51.0
CDE02G1666 Ceratophyllum demersum HOM05D003890 ORTHO05D004514 1.6e-53 213.4 172 59.9
Migut.N02317 Erythranthe guttata HOM05D003890 ORTHO05D004514 8.1e-53 211.1 178 62.4
MBI04_g40116_MAGBIO Magnolia biondii HOM05D003890 ORTHO05D004514 1.8e-52 209.9 242 50.4
Zm00001eb212460 Zea mays HOM05D003890 ORTHO05D004514 1.8e-52 209.9 141 68.8
BolC2t06986H Brassica oleracea HOM05D003890 ORTHO05D004514 6.8e-52 208.0 220 52.3
HanXRQChr16g0524491 Helianthus annuus HOM05D003890 ORTHO05D004514 1.5e-51 206.8 160 65.0
Nn7g36206 Nelumbo nucifera HOM05D003890 ORTHO05D004514 2.6e-51 206.1 227 54.2
A02p05850 Brassica napus HOM05D003890 ORTHO05D004514 3.4e-51 205.7 231 49.8
BraA02t05537Z Brassica rapa HOM05D003890 ORTHO05D004514 3.4e-51 205.7 218 51.8
Os03g0807900 Oryza sativa ssp. japonica HOM05D003890 ORTHO05D004514 9.9e-51 204.1 142 66.2
MSTRG.18426 Avicennia marina HOM05D003890 ORTHO05D004514 1.3e-50 203.8 208 54.3
MSTRG.17029 Avicennia marina HOM05D003890 ORTHO05D004514 2.2e-50 203.0 200 53.5
Peaxi162Scf00004g02340 Petunia axillaris HOM05D003890 ORTHO05D004514 4.9e-50 201.8 213 53.5
SalBow6G5214 Salvia bowleyana HOM05D003890 ORTHO05D004514 4.9e-50 201.8 198 52.0
DCAR_003214 Daucus carota HOM05D003890 ORTHO05D004514 8.3e-50 201.1 135 69.6
Migut.D00602 Erythranthe guttata HOM05D003890 ORTHO05D004514 8.3e-50 201.1 216 51.9
SalBow6G3376 Salvia bowleyana HOM05D003890 ORTHO05D004514 1.1e-49 200.7 200 51.5
arahy.Tifrunner.gnm1.ann1.V44IJD Arachis hypogaea HOM05D003890 ORTHO05D004514 1.4e-49 200.3 211 56.9
Thhalv10015929m.g Eutrema salsugineum HOM05D003890 ORTHO05D004514 4.6e-48 195.3 205 53.2
unitig_22.g6202 Utricularia gibba HOM05D003890 ORTHO05D004514 1.0e-47 194.1 193 54.9
Os07g0569600 Oryza sativa ssp. japonica HOM05D003890 ORTHO05D004514 1.7e-47 193.4 166 57.8
SGA_v2.0_scaffold3G01504 Striga asiatica HOM05D003890 ORTHO05D004514 3.9e-47 192.2 205 51.2
MELO3C015193.2 Cucumis melo HOM05D003890 ORTHO05D004514 8.6e-47 191.0 182 57.1
unitig_8.g2995 Utricularia gibba HOM05D003890 ORTHO05D004514 8.6e-47 191.0 205 50.2
MSTRG.28066 Avicennia marina HOM05D003890 ORTHO05D004514 7.3e-46 188.0 201 47.8
AUR62000123 Chenopodium quinoa HOM05D003890 ORTHO05D004514 1.4e-44 183.7 222 49.1
HPP92_024873 Vanilla planifolia HOM05D003890 ORTHO05D004514 1.5e-43 180.3 158 58.9
Zm00001eb324740 Zea mays HOM05D003890 ORTHO05D004514 4.4e-43 178.7 129 61.2
Sopen01g034250 Solanum pennellii HOM05D003890 ORTHO05D004514 9.9e-43 177.6 213 47.9
Solyc01g087190.4 Solanum lycopersicum HOM05D003890 ORTHO05D004514 1.3e-42 177.2 213 46.5
Eucgr.B03687 Eucalyptus grandis HOM05D003890 ORTHO05D004514 3.8e-42 175.6 188 52.1
Pp3c12_1270 Physcomitrium patens HOM05D003890 ORTHO05D004514 4.9e-42 175.3 128 64.1
Peaxi162Scf00953g00113 Petunia axillaris HOM05D003890 ORTHO05D004514 2.4e-41 172.9 209 45.9
CAN.G1560.2 Capsicum annuum HOM05D003890 ORTHO05D004514 5.4e-41 171.8 215 45.1
Nitab4.5_0001186g0010 Nicotiana tabacum HOM05D003890 ORTHO05D004514 7.1e-41 171.4 203 45.8
Lsat_1_v5_gn_4_31621 Lactuca sativa HOM05D003890 ORTHO05D004514 9.3e-41 171.0 138 62.3
PGSC0003DMG400006801 Solanum tuberosum HOM05D003890 ORTHO05D004514 9.3e-41 171.0 219 46.1
Mapoly0069s0007 Marchantia polymorpha HOM05D003890 ORTHO05D004514 6.0e-40 168.3 166 52.4
Nitab4.5_0004290g0020 Nicotiana tabacum HOM05D003890 ORTHO05D004514 7.8e-40 167.9 213 44.1
Pp3c9_10480 Physcomitrium patens HOM05D003890 ORTHO05D004514 3.9e-39 165.6 128 59.4
Ah.06g194180 Amaranthus hybridus HOM05D003890 ORTHO05D004514 3.3e-38 162.5 264 41.3
SMO275G0040 Selaginella moellendorffii HOM05D003890 ORTHO05D004514 3.3e-38 162.5 122 62.3
HanXRQChr01g0018191 Helianthus annuus HOM05D003890 ORTHO05D004514 6.2e-37 158.3 211 44.5
Mapoly0002s0228 Marchantia polymorpha HOM05D003890 ORTHO05D004514 1.1e-36 157.5 132 58.3
AagrBONN_evm.TU.Sc2ySwM_228.2147 Anthoceros agrestis HOM05D003890 ORTHO05D004514 1.8e-36 156.8 172 47.7
SEGI_02367 Sequoiadendron giganteum HOM05D003890 ORTHO05D004514 1.7e-34 150.2 106 63.2
CBR_g21098 Chara braunii HOM05D003890 ORTHO05D004514 3.8e-34 149.1 129 53.5
BcaC04g19383 Brassica carinata HOM05D003890 ORTHO05D004514 1.1e-33 147.5 198 48.0
CSS0039551 Camellia sinensis var. sinensis HOM05D003890 ORTHO05D004514 6.0e-32 141.7 82 80.5
C09p56300 Brassica napus HOM05D003890 ORTHO05D004514 2.3e-31 139.8 214 45.3
BolC9t58499H Brassica oleracea HOM05D003890 ORTHO05D004514 2.3e-31 139.8 214 45.3
Sc09g0000720 Simmondsia chinensis HOM05D003890 ORTHO05D004514 6.6e-31 138.3 147 51.7
arahy.Tifrunner.gnm1.ann1.11Y6U0 Arachis hypogaea HOM05D003890 ORTHO05D004514 1.3e-29 134.0 88 72.7
Sp6g24540 Schrenkiella parvula HOM05D003890 ORTHO05D004514 2.0e-27 126.7 209 40.2
A10p19900 Brassica napus HOM05D003890 ORTHO05D004514 7.4e-22 108.2 63 76.2
BraA10t44065Z Brassica rapa HOM05D003890 ORTHO05D004514 2.2e-18 96.7 54 75.9
BcaC04g19382 Brassica carinata HOM05D000916 ORTHO05D008653 2.1e-16 90.1 54 75.9
CSS0045152 Camellia sinensis var. sinensis HOM05D003890 ORTHO05D004514 2.5e-09 66.6 107 38.3


User provided reference genes

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