Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr04g0247191 Lupinus albus HOM05D007186 ORTHO05D008970 9.5e-83 310.1 151 100.0
Medtr5g097970 Medicago truncatula HOM05D007186 ORTHO05D008970 4.3e-59 231.5 146 77.4
TPR.G15068 Trifolium pratense HOM05D007186 ORTHO05D008970 4.8e-58 228.0 143 75.5
VMungo0647G1315 Vigna mungo HOM05D007186 ORTHO05D008970 3.4e-56 221.9 143 74.8
arahy.Tifrunner.gnm1.ann1.HI5B62 Arachis hypogaea HOM05D007186 ORTHO05D008970 5.8e-56 221.1 145 73.1
Phvul.008G287400 Phaseolus vulgaris HOM05D007186 ORTHO05D008970 6.4e-55 217.6 143 72.0
Glyma.02G307400 Glycine max HOM05D007186 ORTHO05D008970 3.2e-54 215.3 145 73.1
Psat2g003840 Pisum sativum HOM05D007186 ORTHO05D008970 4.2e-54 214.9 145 71.0
arahy.Tifrunner.gnm1.ann1.CRYT1U Arachis hypogaea HOM05D007186 ORTHO05D008970 3.5e-53 211.8 157 68.2
LjContig00081g0025535 Lotus japonicus HOM05D000229 ORTHO05D008970 1.9e-51 206.1 132 74.2
CANSAT54G2500 Cannabis sativa HOM05D007186 ORTHO05D008970 2.5e-51 205.7 147 67.3
GSVIVG01030422001 Vitis vinifera HOM05D007186 ORTHO05D008970 2.6e-48 195.7 147 66.0
Gorai.001G219300 Gossypium raimondii HOM05D007186 ORTHO05D008970 5.8e-48 194.5 146 63.7
FAN05G2361 Fragaria x ananassa HOM05D007186 ORTHO05D008970 7.6e-48 194.1 145 63.4
Potri.014G162700 Populus trichocarpa HOM05D007186 ORTHO05D008970 7.6e-48 194.1 148 64.2
RcHm_v2.0_Chr2g0157151 Rosa chinensis HOM05D007186 ORTHO05D008970 1.3e-47 193.4 145 64.1
Gohir.D07G195800 Gossypium hirsutum HOM05D007186 ORTHO05D008970 1.7e-47 193.0 146 63.0
Hund24136 Selenicereus undatus HOM05D007186 ORTHO05D008970 1.7e-47 193.0 142 62.7
FvH4_6g41490 Fragaria vesca HOM05D007186 ORTHO05D008970 2.2e-47 192.6 145 62.8
Ciclev10016992m.g Citrus clementina HOM05D007186 ORTHO05D008970 2.9e-47 192.2 145 64.8
Prupe.3G204800 Prunus persica HOM05D007186 ORTHO05D008970 2.9e-47 192.2 146 61.6
CiPaw.04G194300 Carya illinoinensis HOM05D007186 ORTHO05D008970 3.8e-47 191.8 146 63.7
QL08p029418 Quercus lobata HOM05D007186 ORTHO05D008970 3.8e-47 191.8 147 61.2
COL.COLO4_06941 Corchorus olitorius HOM05D007186 ORTHO05D008970 1.1e-46 190.3 144 64.6
Sabra14G0124100 Salix brachista HOM05D007186 ORTHO05D008970 1.1e-46 190.3 147 63.3
CsaV3_6G009340 Cucumis sativus L. HOM05D007186 ORTHO05D008970 1.9e-46 189.5 147 63.9
THA.LOC104808856 Tarenaya hassleriana HOM05D007186 ORTHO05D008970 2.5e-46 189.1 148 58.8
AUR62017547 Chenopodium quinoa HOM05D007186 ORTHO05D008970 3.2e-46 188.7 151 60.9
TWI36G0211 Tripterygium wilfordii HOM05D007186 ORTHO05D008970 4.2e-46 188.3 146 61.0
CSS0038956 Camellia sinensis var. sinensis HOM05D007186 ORTHO05D008970 9.3e-46 187.2 146 61.0
FAN09G3526 Fragaria x ananassa HOM05D007186 ORTHO05D008970 9.3e-46 187.2 145 63.4
Dinv07835 Davidia involucrata HOM05D007186 ORTHO05D008970 2.1e-45 186.0 145 62.1
PGSC0003DMG400030273 Solanum tuberosum HOM05D007186 ORTHO05D008970 2.1e-45 186.0 145 62.1
MELO3C019365.2 Cucumis melo HOM05D007186 ORTHO05D008970 3.5e-45 185.3 147 62.6
Rhsim06G0171800 Rhododendron simsii HOM05D007186 ORTHO05D008970 4.6e-45 184.9 145 60.0
Atru.chr6.3329 Acer truncatum HOM05D007186 ORTHO05D008970 7.9e-45 184.1 147 62.6
AUR62015089 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.0e-44 183.7 151 58.9
AUR62044229 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.0e-44 183.7 151 58.9
AUR62044345 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.0e-44 183.7 151 58.9
MD09G1119400 Malus domestica HOM05D007186 ORTHO05D008970 1.8e-44 183.0 145 60.7
HanXRQChr03g0075731 Helianthus annuus HOM05D007186 ORTHO05D008970 3.0e-44 182.2 149 58.4
Sopen05g025420 Solanum pennellii HOM05D007186 ORTHO05D008970 3.0e-44 182.2 145 60.7
ECA240G1183 Erigeron canadensis HOM05D007186 ORTHO05D008970 6.7e-44 181.0 148 60.8
C03p55060 Brassica napus HOM05D007186 ORTHO05D008970 8.7e-44 180.6 149 55.7
BolC3t17781H Brassica oleracea HOM05D007186 ORTHO05D008970 8.7e-44 180.6 149 55.7
Solyc05g041430.3 Solanum lycopersicum HOM05D007186 ORTHO05D008970 8.7e-44 180.6 145 60.0
Aqoxy1G02832 Aquilegia oxysepala HOM05D007186 ORTHO05D008970 1.5e-43 179.9 151 54.3
Nitab4.5_0011275g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 2.5e-43 179.1 146 58.9
BcaC01g03189 Brassica carinata HOM05D007186 ORTHO05D008970 3.3e-43 178.7 149 55.7
Carub.0003s2639 Capsella rubella HOM05D007186 ORTHO05D008970 3.3e-43 178.7 147 56.5
AL3G42380 Arabidopsis lyrata HOM05D007186 ORTHO05D008970 4.3e-43 178.3 143 58.0
TAR624G0839 Trochodendron aralioides HOM05D007186 ORTHO05D008970 4.3e-43 178.3 145 59.3
CARHR102760 Cardamine hirsuta HOM05D007186 ORTHO05D008970 7.4e-43 177.6 143 56.6
Nitab4.5_0002877g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 9.6e-43 177.2 144 56.9
PSO675G5362 Papaver somniferum HOM05D007186 ORTHO05D008970 9.6e-43 177.2 146 58.9
ATR0712G003 Amborella trichopoda HOM05D007186 ORTHO05D008970 1.6e-42 176.4 139 58.3
Peaxi162Scf00147g01818 Petunia axillaris HOM05D007186 ORTHO05D008970 2.1e-42 176.0 146 56.8
Sp3g23400 Schrenkiella parvula HOM05D007186 ORTHO05D008970 8.2e-42 174.1 144 56.2
HPP92_022801 Vanilla planifolia HOM05D007186 ORTHO05D008970 1.4e-41 173.3 143 55.9
PGR142G1014 Punica granatum HOM05D007186 ORTHO05D008970 2.4e-41 172.6 147 56.5
Lsat_1_v5_gn_9_105540 Lactuca sativa HOM05D007186 ORTHO05D008970 5.3e-41 171.4 147 55.1
Thhalv10002690m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 1.2e-40 170.2 149 51.7
Manes.13G063846 Manihot esculenta HOM05D007186 ORTHO05D008970 1.2e-40 170.2 132 62.1
Glyma.14G005600 Glycine max HOM05D007186 ORTHO05D008970 1.5e-40 169.9 127 67.7
BraA03t13576Z Brassica rapa HOM05D007186 ORTHO05D008970 2.0e-40 169.5 131 58.8
Actinidia07891 Actinidia chinensis HOM05D007186 ORTHO05D008970 2.6e-40 169.1 128 61.7
A03p44430 Brassica napus HOM05D007186 ORTHO05D008970 2.6e-40 169.1 131 58.8
Hma1.2p1_0133F.1_g061060 Hydrangea macrophylla HOM05D007186 ORTHO05D008970 2.6e-40 169.1 129 62.0
Eucgr.K00670 Eucalyptus grandis HOM05D007186 ORTHO05D008970 4.5e-40 168.3 151 53.6
Duzib138G0377 Durio zibethinus HOM05D007186 ORTHO05D008970 2.9e-39 165.6 127 61.4
BcaB08g34487 Brassica carinata HOM05D007186 ORTHO05D008970 5.0e-39 164.9 138 56.5
BcaC01g03185 Brassica carinata HOM05D007186 ORTHO05D008970 5.0e-39 164.9 138 54.3
ClCG02G009490 Citrullus lanatus HOM05D007186 ORTHO05D008970 5.0e-39 164.9 198 46.5
C03p55120 Brassica napus HOM05D007186 ORTHO05D008970 8.5e-39 164.1 131 55.7
Haze_12721 Corylus avellana HOM05D007186 ORTHO05D008970 8.5e-39 164.1 217 42.9
MBI19_g06151_MAGBIO Magnolia biondii HOM05D007186 ORTHO05D008970 1.1e-38 163.7 128 57.0
BolC3t17784H Brassica oleracea HOM05D007186 ORTHO05D008970 3.2e-38 162.2 131 55.7
Sed0024069 Sechium edule HOM05D007186 ORTHO05D008970 1.6e-37 159.8 130 58.5
unitig_578.g16640 Utricularia gibba HOM05D007186 ORTHO05D008970 1.3e-36 156.8 150 52.0
BcaC01g03187 Brassica carinata HOM05D007186 ORTHO05D008970 1.5e-35 153.3 130 54.6
AUR62044292 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.5e-35 152.5 147 54.4
Migut.M00010 Erythranthe guttata HOM05D007186 ORTHO05D008970 2.2e-34 149.4 149 54.4
SEGI_21441 Sequoiadendron giganteum HOM05D007186 ORTHO05D008970 4.1e-33 145.2 144 47.9
Aa31sc53G20 Aethionema arabicum HOM05D007186 ORTHO05D006113 5.3e-33 144.8 150 47.3
Zm00001eb245650 Zea mays HOM05D007186 ORTHO05D008970 1.2e-32 143.7 127 53.5
Oeu040479.1 Olea europaea HOM05D007186 ORTHO05D008970 1.4e-30 136.7 112 58.0
SalBow7G1582 Salvia bowleyana HOM05D000037 ORTHO05D000150 4.2e-30 135.2 125 55.2
arahy.Tifrunner.gnm1.ann1.I316DY Arachis hypogaea HOM05D007186 ORTHO05D008970 7.2e-30 134.4 86 70.9
Os02g0588600 Oryza sativa ssp. japonica HOM05D007186 ORTHO05D008970 9.4e-30 134.0 136 47.1
DCAR_032166 Daucus carota HOM05D000693 ORTHO05D008970 1.1e-27 127.1 96 61.5
arahy.Tifrunner.gnm1.ann1.ZIY68Y Arachis hypogaea HOM05D007186 ORTHO05D008970 2.6e-27 125.9 79 74.7
Lj8A132T57 Lonicera japonica HOM05D007186 ORTHO05D008970 2.6e-27 125.9 147 47.6
Sc20g0003870 Simmondsia chinensis HOM05D007186 ORTHO05D008970 9.7e-27 124.0 100 53.0
arahy.Tifrunner.gnm1.ann1.5R4F72 Arachis hypogaea HOM05D007186 ORTHO05D008970 1.0e-23 114.0 109 55.0
EL10Ac9g22768 Beta vulgaris HOM05D007186 ORTHO05D008970 4.7e-21 105.1 81 65.4
Pp3c15_5880 Physcomitrium patens HOM05D007186 ORTHO05D008970 4.7e-21 105.1 135 41.5
SMO364G0535 Selaginella moellendorffii HOM05D007186 ORTHO05D008970 3.0e-20 102.4 136 41.9
FAN14G0401 Fragaria x ananassa HOM05D007186 ORTHO05D008970 5.2e-20 101.7 78 64.1
Nn1g07413 Nelumbo nucifera HOM05D007186 ORTHO05D008970 2.0e-19 99.8 72 56.9
Thecc.01G185600 Theobroma cacao HOM05D007186 ORTHO05D008970 2.6e-19 99.4 85 60.0
vmacro12130 Vaccinium macrocarpon HOM05D007186 ORTHO05D008970 4.4e-19 98.6 76 65.8
MSTRG.6661 Avicennia marina HOM05D007186 ORTHO05D008970 7.4e-19 97.8 70 71.4
Gohir.A07G189700 Gossypium hirsutum HOM05D007186 ORTHO05D008970 9.7e-19 97.4 90 57.8
Mapoly0123s0026 Marchantia polymorpha HOM05D007186 ORTHO05D008970 9.7e-19 97.4 143 39.2
FAN02G3692 Fragaria x ananassa HOM05D007186 ORTHO05D008970 1.7e-18 96.7 77 62.3
Eucgr.K00669 Eucalyptus grandis HOM05D007186 ORTHO05D008970 5.3e-17 91.7 72 55.6
AUR62025215 Chenopodium quinoa HOM05D007186 ORTHO05D008970 3.0e-12 75.9 63 60.3
Thhalv10002943m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 2.4e-09 66.2 62 48.4
Sopen05g025410 Solanum pennellii HOM05D007186 ORTHO05D008970 1.6e-08 63.5 41 73.2
Cre02.g104000 Chlamydomonas reinhardtii HOM05D007186 ORTHO05D008970 5.0e-07 58.5 117 28.2
AT2G04790 Arabidopsis thaliana HOM05D007186 ORTHO05D008970 9.4e-06 54.3 42 59.5


User provided reference genes

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