Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr03g0040981 Lupinus albus HOM05D006548 ORTHO05D008064 5.5e-81 304.3 160 100.0
Lalb_Chr01g0021941 Lupinus albus HOM05D006548 ORTHO05D008064 7.5e-70 267.3 163 85.3
VMungo1383G2587 Vigna mungo HOM05D006548 ORTHO05D008064 1.4e-63 246.5 163 74.8
Phvul.008G137800 Phaseolus vulgaris HOM05D006548 ORTHO05D008064 1.2e-62 243.4 165 74.5
Glyma.08G343100 Glycine max HOM05D006548 ORTHO05D008064 5.8e-62 241.1 163 72.4
Lj1g0008534 Lotus japonicus HOM05D006548 ORTHO05D008064 1.7e-61 239.6 163 79.1
Psat3g151760 Pisum sativum HOM05D006548 ORTHO05D008064 8.3e-61 237.3 163 71.8
Glyma.18G153900 Glycine max HOM05D006548 ORTHO05D008064 1.6e-59 233.0 163 71.2
Ca_07442_v3 Cicer arietinum L. HOM05D006548 ORTHO05D008064 2.1e-59 232.6 164 68.9
TPR.G26806 Trifolium pratense HOM05D006548 ORTHO05D008064 2.3e-58 229.2 164 68.9
Medtr7g051230 Medicago truncatula HOM05D006548 ORTHO05D008064 9.5e-57 223.8 163 69.3
Manes.13G055300 Manihot esculenta HOM05D006548 ORTHO05D008064 1.6e-56 223.0 160 68.8
arahy.Tifrunner.gnm1.ann1.C7NXRU Arachis hypogaea HOM05D006548 ORTHO05D008064 2.1e-56 222.6 161 73.9
Peaxi162Scf00372g00041 Petunia axillaris HOM05D006548 ORTHO05D008064 2.1e-56 222.6 157 70.1
PGR083G0463 Punica granatum HOM05D006548 ORTHO05D008064 2.1e-56 222.6 157 72.0
Sabra02G0182000 Salix brachista HOM05D006548 ORTHO05D008064 2.1e-56 222.6 160 71.2
arahy.Tifrunner.gnm1.ann1.I0E60T Arachis hypogaea HOM05D006548 ORTHO05D008064 3.6e-56 221.9 161 73.9
Aqoxy2G04054 Aquilegia oxysepala HOM05D006548 ORTHO05D008064 6.2e-56 221.1 160 66.2
Sabra14G0135300 Salix brachista HOM05D006548 ORTHO05D008064 8.1e-56 220.7 160 70.6
Cfa010631 Carpinus fangiana HOM05D006548 ORTHO05D008064 1.4e-55 219.9 155 77.4
Potri.002G239000 Populus trichocarpa HOM05D006548 ORTHO05D008064 1.4e-55 219.9 160 70.0
A05p40730 Brassica napus HOM05D006548 ORTHO05D008064 1.8e-55 219.5 154 72.7
BraA05t22804Z Brassica rapa HOM05D006548 ORTHO05D008064 1.8e-55 219.5 154 72.7
Sp3g06390 Schrenkiella parvula HOM05D006548 ORTHO05D008064 1.8e-55 219.5 160 70.0
Nn3g18599 Nelumbo nucifera HOM05D006548 ORTHO05D008064 3.1e-55 218.8 157 69.4
BolC5t34638H Brassica oleracea HOM05D006548 ORTHO05D008064 4.0e-55 218.4 154 72.1
Manes.12G059600 Manihot esculenta HOM05D006548 ORTHO05D008064 5.2e-55 218.0 160 67.5
Potri.014G177100 Populus trichocarpa HOM05D006548 ORTHO05D008064 6.8e-55 217.6 160 69.4
AL3G18800 Arabidopsis lyrata HOM05D006548 ORTHO05D008064 8.9e-55 217.2 155 70.3
AT3G07480 Arabidopsis thaliana HOM05D006548 ORTHO05D008064 8.9e-55 217.2 155 70.3
BcaC05g29539 Brassica carinata HOM05D006548 ORTHO05D008064 8.9e-55 217.2 157 70.7
C05p59840 Brassica napus HOM05D006548 ORTHO05D008064 1.2e-54 216.9 154 72.1
Carub.0003s0703 Capsella rubella HOM05D006548 ORTHO05D008064 1.2e-54 216.9 155 71.6
Ciclev10017030m.g Citrus clementina HOM05D006548 ORTHO05D008064 2.0e-54 216.1 161 68.9
CARHR082130 Cardamine hirsuta HOM05D006548 ORTHO05D008064 3.4e-54 215.3 159 67.9
Nitab4.5_0002311g0090 Nicotiana tabacum HOM05D006548 ORTHO05D008064 3.4e-54 215.3 160 67.5
Sed0004612 Sechium edule HOM05D006548 ORTHO05D008064 3.4e-54 215.3 158 69.6
Atru.chr6.3534 Acer truncatum HOM05D006548 ORTHO05D008064 4.4e-54 214.9 161 68.3
Nitab4.5_0011925g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 4.4e-54 214.9 161 66.5
TAR362G1118 Trochodendron aralioides HOM05D006548 ORTHO05D008064 4.4e-54 214.9 162 66.0
Haze_03573 Corylus avellana HOM05D006548 ORTHO05D008064 5.8e-54 214.5 156 74.4
THA.LOC104819003 Tarenaya hassleriana HOM05D006548 ORTHO05D008064 7.5e-54 214.2 162 66.7
BcaB03g14699 Brassica carinata HOM05D006548 ORTHO05D008064 9.9e-54 213.8 154 69.5
Hma1.2p1_0161F.1_g071510 Hydrangea macrophylla HOM05D006548 ORTHO05D008064 9.9e-54 213.8 161 68.9
Thhalv10021677m.g Eutrema salsugineum HOM05D006548 ORTHO05D008064 1.3e-53 213.4 156 69.2
Gohir.D11G149500 Gossypium hirsutum HOM05D006548 ORTHO05D008064 1.3e-53 213.4 157 65.0
Gorai.007G160300 Gossypium raimondii HOM05D006548 ORTHO05D008064 2.9e-53 212.2 157 65.0
Gohir.A11G143200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 3.7e-53 211.8 157 65.0
Sopen06g034400 Solanum pennellii HOM05D006548 ORTHO05D008064 4.9e-53 211.5 159 67.3
CSS0021481 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 6.4e-53 211.1 161 66.5
Oeu051515.1 Olea europaea HOM05D006548 ORTHO05D008064 6.4e-53 211.1 160 65.6
Ah.11g050830 Amaranthus hybridus HOM05D006548 ORTHO05D008064 8.3e-53 210.7 161 66.5
MSTRG.17967 Avicennia marina HOM05D006548 ORTHO05D008064 8.3e-53 210.7 160 66.2
Nitab4.5_0001348g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 8.3e-53 210.7 162 66.0
Nitab4.5_0007144g0040 Nicotiana tabacum HOM05D006548 ORTHO05D008064 8.3e-53 210.7 162 66.0
PGSC0003DMG400027686 Solanum tuberosum HOM05D006548 ORTHO05D008064 8.3e-53 210.7 159 66.7
Cpa.g.sc8.57 Carica papaya HOM05D004405 ORTHO05D005613 1.1e-52 210.3 156 68.6
Lj2P1115T39 Lonicera japonica HOM05D006548 ORTHO05D008064 1.1e-52 210.3 161 64.6
PSO017G5831 Papaver somniferum HOM05D006548 ORTHO05D008064 1.1e-52 210.3 157 68.8
Prupe.8G188900 Prunus persica HOM05D006548 ORTHO05D008064 1.1e-52 210.3 162 67.3
TWI75G1339 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 1.1e-52 210.3 155 65.2
COL.COLO4_06931 Corchorus olitorius HOM05D006548 ORTHO05D008064 1.9e-52 209.5 159 65.4
PSO675G8742 Papaver somniferum HOM05D006548 ORTHO05D008064 1.9e-52 209.5 157 68.2
Rhsim13G0053600 Rhododendron simsii HOM05D006548 ORTHO05D008064 1.9e-52 209.5 160 65.0
vmacro02826 Vaccinium macrocarpon HOM05D006548 ORTHO05D008064 1.9e-52 209.5 159 65.4
Nn4g25121 Nelumbo nucifera HOM05D006548 ORTHO05D008064 2.4e-52 209.1 157 66.9
CiPaw.13G058400 Carya illinoinensis HOM05D006548 ORTHO05D008064 3.2e-52 208.8 158 68.4
Aa31LG5G18040 Aethionema arabicum HOM05D006548 ORTHO05D008064 7.1e-52 207.6 159 66.7
Cc01_g16030 Coffea canephora HOM05D006548 ORTHO05D008064 9.2e-52 207.2 160 65.0
RcHm_v2.0_Chr6g0282621 Rosa chinensis HOM05D006548 ORTHO05D008064 1.2e-51 206.8 159 64.2
ClCG09G007890 Citrullus lanatus HOM05D006548 ORTHO05D008064 1.6e-51 206.5 163 67.5
Solyc06g007630.1 Solanum lycopersicum HOM05D006548 ORTHO05D008064 2.1e-51 206.1 159 69.8
Sopen06g002520 Solanum pennellii HOM05D006548 ORTHO05D008064 2.1e-51 206.1 159 69.8
HanXRQChr08g0231851 Helianthus annuus HOM05D006548 ORTHO05D008064 2.7e-51 205.7 161 63.4
PGSC0003DMG400020639 Solanum tuberosum HOM05D006548 ORTHO05D008064 4.6e-51 204.9 159 69.8
TWI36G0698 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 6.0e-51 204.5 158 64.6
AUR62028648 Chenopodium quinoa HOM05D006548 ORTHO05D008064 7.8e-51 204.1 165 61.8
HPP92_002744 Vanilla planifolia HOM05D006548 ORTHO05D008064 1.0e-50 203.8 159 64.2
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 1.3e-50 203.4 162 63.6
MD10G1150500 Malus domestica HOM05D006548 ORTHO05D008064 1.3e-50 203.4 162 66.0
TWI18G0731 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 1.3e-50 203.4 158 65.2
FAN24G3284 Fragaria x ananassa HOM05D006548 ORTHO05D008064 1.7e-50 203.0 157 62.4
CAN.G874.34 Capsicum annuum HOM05D006548 ORTHO05D008064 3.0e-50 202.2 159 66.0
FAN27G0042 Fragaria x ananassa HOM05D006548 ORTHO05D008064 6.6e-50 201.1 159 62.9
FAN27G0390 Fragaria x ananassa HOM05D006548 ORTHO05D008064 6.6e-50 201.1 159 62.9
Gohir.D07G202600 Gossypium hirsutum HOM05D006548 ORTHO05D008064 8.6e-50 200.7 157 63.7
SGA_v2.0_scaffold95G28706 Striga asiatica HOM05D006548 ORTHO05D008064 8.6e-50 200.7 161 62.7
ECA247G0922 Erigeron canadensis HOM05D006548 ORTHO05D008064 1.5e-49 199.9 158 61.4
CSS0032607 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 1.9e-49 199.5 163 66.3
FvH4_2g17650 Fragaria vesca HOM05D006548 ORTHO05D008064 1.9e-49 199.5 159 62.3
CANSAT01G2941 Cannabis sativa HOM05D006548 ORTHO05D008064 2.5e-49 199.1 164 65.9
Gorai.001G228000 Gossypium raimondii HOM05D006548 ORTHO05D008064 2.5e-49 199.1 157 63.1
Migut.N00670 Erythranthe guttata HOM05D006548 ORTHO05D008064 1.6e-48 196.4 162 60.5
DCAR_030798 Daucus carota HOM05D006548 ORTHO05D008064 2.8e-48 195.7 158 63.3
Duzib138G0849 Durio zibethinus HOM05D006548 ORTHO05D008064 3.6e-48 195.3 157 61.8
QL09p047049 Quercus lobata HOM05D006548 ORTHO05D008064 6.2e-48 194.5 157 62.4
MELO3C015717.2 Cucumis melo HOM05D006548 ORTHO05D008064 8.1e-48 194.1 163 60.7
unitig_61.g26345 Utricularia gibba HOM05D006548 ORTHO05D008064 1.1e-47 193.7 161 60.9
Duzib211G0675 Durio zibethinus HOM05D006548 ORTHO05D008064 2.4e-47 192.6 158 59.5
GSVIVG01003797001 Vitis vinifera HOM05D006548 ORTHO05D008064 7.6e-46 187.6 119 66.4
Lsat_1_v5_gn_9_16480 Lactuca sativa HOM05D006548 ORTHO05D008064 1.3e-45 186.8 163 58.9
ATR0824G029 Amborella trichopoda HOM05D006548 ORTHO05D008064 1.1e-44 183.7 147 62.6
Zm00001eb102720 Zea mays HOM05D006548 ORTHO05D008064 4.2e-44 181.8 138 63.8
Os09g0514600 Oryza sativa ssp. japonica HOM05D006548 ORTHO05D008064 7.1e-44 181.0 120 70.0
Thecc.01G209700 Theobroma cacao HOM05D006548 ORTHO05D008064 3.5e-43 178.7 144 63.2
Sc05g0001680 Simmondsia chinensis HOM05D006548 ORTHO05D008064 6.6e-42 174.5 144 62.5
CsaV3_7G027180 Cucumis sativus L. HOM05D006548 ORTHO05D008064 5.6e-41 171.4 150 60.7
Zm00001eb318350 Zea mays HOM05D006548 ORTHO05D008064 1.6e-40 169.9 116 68.1
EL10Ac5g10597 Beta vulgaris HOM05D006548 ORTHO05D008064 3.8e-37 158.7 151 58.3
Pp3c2_31000 Physcomitrium patens HOM05D006548 ORTHO05D008064 2.3e-34 149.4 122 54.1
Gohir.A07G196200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 2.5e-33 146.0 91 73.6
AagrBONN_evm.TU.Sc2ySwM_362.984 Anthoceros agrestis HOM05D006548 ORTHO05D008064 2.4e-31 139.4 159 45.3
CDE12G0850 Ceratophyllum demersum HOM05D006548 ORTHO05D008064 4.9e-29 131.7 74 75.7
BcaC05g29538 Brassica carinata HOM05D006548 ORTHO05D008064 1.4e-28 130.2 104 66.3
Mapoly0085s0036 Marchantia polymorpha HOM05D006548 ORTHO05D008064 3.2e-28 129.0 123 49.6
C03p67920 Brassica napus HOM05D006548 ORTHO05D008064 1.9e-25 119.8 89 65.2
Ciclev10013747m.g Citrus clementina HOM05D006548 ORTHO05D008064 5.6e-25 118.2 82 68.3
BcaC01g02172 Brassica carinata HOM05D006548 ORTHO05D008064 9.6e-25 117.5 89 64.0
SEGI_16405 Sequoiadendron giganteum HOM05D002489 ORTHO05D002653 4.8e-16 88.6 60 65.0
BolC3t19017H Brassica oleracea HOM05D006548 ORTHO05D008064 1.0e-13 80.9 51 70.6
BraA03t13759Z Brassica rapa HOM05D006548 ORTHO05D008064 3.8e-13 79.0 48 75.0
SMO119G0279 Selaginella moellendorffii HOM05D006548 ORTHO05D008064 1.1e-12 77.4 118 35.6
Actinidia30005 Actinidia chinensis HOM05D006548 ORTHO05D008064 9.3e-12 74.3 164 37.2
CBR_g34314 Chara braunii HOM05D006548 ORTHO05D008064 4.6e-11 72.0 148 29.1
Mapoly0113s0043 Marchantia polymorpha HOM05D006548 ORTHO05D008064 9.7e-09 64.3 131 31.3


User provided reference genes

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