Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr02g0160001 Lupinus albus HOM05D005271 ORTHO05D006072 1.6e-49 199.1 105 100.0
Lalb_Chr02g0160211 Lupinus albus HOM05D005271 ORTHO05D006072 1.6e-49 199.1 105 100.0
Ca_28197_v3 Cicer arietinum L. HOM05D005271 ORTHO05D006072 1.5e-39 166.0 105 82.9
Medtr6g017185 Medicago truncatula HOM05D005271 ORTHO05D006072 8.5e-38 160.2 105 80.0
Phvul.004G017800 Phaseolus vulgaris HOM05D005271 ORTHO05D006072 1.4e-37 159.5 105 79.0
Psat0s5346g0120 Pisum sativum HOM05D005271 ORTHO05D006072 4.2e-37 157.9 104 77.9
Lj2g0008924 Lotus japonicus HOM05D005271 ORTHO05D006072 5.5e-37 157.5 105 77.1
VMungo0464G2009 Vigna mungo HOM05D005271 ORTHO05D006072 1.0e-35 153.3 105 75.2
arahy.Tifrunner.gnm1.ann1.5IT82G Arachis hypogaea HOM05D005271 ORTHO05D006072 1.4e-35 152.9 105 76.2
arahy.Tifrunner.gnm1.ann1.0KQV7A Arachis hypogaea HOM05D005271 ORTHO05D006072 1.8e-35 152.5 105 75.2
arahy.Tifrunner.gnm1.ann1.31Z3CL Arachis hypogaea HOM05D005271 ORTHO05D006072 1.8e-35 152.5 105 75.2
arahy.Tifrunner.gnm1.ann1.VX2J7C Arachis hypogaea HOM05D005271 ORTHO05D006072 8.8e-35 150.2 105 74.3
Glyma.19G010500 Glycine max HOM05D005271 ORTHO05D006072 4.4e-34 147.9 106 76.4
Glyma.13G170400 Glycine max HOM05D005271 ORTHO05D006072 3.7e-33 144.8 106 73.6
arahy.Tifrunner.gnm1.ann1.FU3306 Arachis hypogaea HOM05D005271 ORTHO05D006072 4.8e-33 144.4 105 73.3
Cfa001130 Carpinus fangiana HOM05D005271 ORTHO05D006072 2.4e-32 142.1 103 71.8
Ciclev10017270m.g Citrus clementina HOM05D005271 ORTHO05D006072 2.4e-32 142.1 103 69.9
CiPaw.09G137400 Carya illinoinensis HOM05D005271 ORTHO05D006072 7.0e-32 140.6 103 70.9
Gohir.A09G226900 Gossypium hirsutum HOM05D005271 ORTHO05D006072 9.1e-32 140.2 103 69.9
Gohir.D09G227900 Gossypium hirsutum HOM05D005271 ORTHO05D006072 9.1e-32 140.2 103 69.9
Gorai.006G250600 Gossypium raimondii HOM05D005271 ORTHO05D006072 9.1e-32 140.2 103 69.9
HanXRQChr14g0428301 Helianthus annuus HOM05D005271 ORTHO05D006072 9.1e-32 140.2 105 70.5
FAN22G0530 Fragaria x ananassa HOM05D005271 ORTHO05D006072 4.5e-31 137.9 103 68.9
Prupe.4G117300 Prunus persica HOM05D005271 ORTHO05D006072 4.5e-31 137.9 103 68.9
FvH4_4g01060 Fragaria vesca HOM05D005271 ORTHO05D006072 5.9e-31 137.5 103 68.0
FAN12G2425 Fragaria x ananassa HOM05D005271 ORTHO05D006072 5.9e-31 137.5 103 68.0
QL11p012305 Quercus lobata HOM05D005271 ORTHO05D006072 5.9e-31 137.5 86 77.9
RcHm_v2.0_Chr5g0021041 Rosa chinensis HOM05D005271 ORTHO05D006072 7.7e-31 137.1 103 68.0
FvH4_3g12930 Fragaria vesca HOM05D005271 ORTHO05D006072 1.0e-30 136.7 103 67.0
FAN11G1405 Fragaria x ananassa HOM05D005271 ORTHO05D006072 1.0e-30 136.7 103 67.0
FAN16G1303 Fragaria x ananassa HOM05D005271 ORTHO05D006072 1.0e-30 136.7 103 67.0
Duzib212G0597 Durio zibethinus HOM05D005271 ORTHO05D006072 1.7e-30 136.0 103 68.0
Thhalv10017819m.g Eutrema salsugineum HOM05D005271 ORTHO05D006072 2.9e-30 135.2 103 68.0
Manes.05G190800 Manihot esculenta HOM05D005271 ORTHO05D006072 1.1e-29 133.3 103 67.0
AT2G31710 Arabidopsis thaliana HOM05D005271 ORTHO05D006072 1.5e-29 132.9 103 67.0
FAN21G0135 Fragaria x ananassa HOM05D005271 ORTHO05D006072 1.5e-29 132.9 103 67.0
TWI15G1056 Tripterygium wilfordii HOM05D005271 ORTHO05D006072 1.5e-29 132.9 88 72.7
Duzib151G0973 Durio zibethinus HOM05D005271 ORTHO05D006072 1.9e-29 132.5 103 67.0
Lsat_1_v5_gn_2_4960 Lactuca sativa HOM05D005271 ORTHO05D006072 1.9e-29 132.5 93 68.8
Thecc.04G266100 Theobroma cacao HOM05D005271 ORTHO05D006072 1.9e-29 132.5 103 67.0
Aa31LG5G5280 Aethionema arabicum HOM05D005271 ORTHO05D006072 3.2e-29 131.7 103 65.0
Manes.01G042100 Manihot esculenta HOM05D005271 ORTHO05D006072 3.2e-29 131.7 103 66.0
AL4G26950 Arabidopsis lyrata HOM05D005271 ORTHO05D006072 4.2e-29 131.3 103 66.0
CARHR125350 Cardamine hirsuta HOM05D005271 ORTHO05D006072 4.2e-29 131.3 103 65.0
TWI63G0865 Tripterygium wilfordii HOM05D005271 ORTHO05D006072 4.2e-29 131.3 88 71.6
Atru.chr1.851 Acer truncatum HOM05D005271 ORTHO05D006072 5.5e-29 131.0 103 68.9
ECA238G4336 Erigeron canadensis HOM05D005271 ORTHO05D006072 5.5e-29 131.0 105 62.9
Cc10_g11580 Coffea canephora HOM05D005271 ORTHO05D006072 9.4e-29 130.2 104 64.4
BcaB06g28531 Brassica carinata HOM05D005271 ORTHO05D006072 1.6e-28 129.4 103 63.1
BcaC01g05934 Brassica carinata HOM05D000364 ORTHO05D006072 1.6e-28 129.4 103 64.1
C03p20920 Brassica napus HOM05D000364 ORTHO05D006072 1.6e-28 129.4 103 64.1
C04p60870 Brassica napus HOM05D005271 ORTHO05D006072 1.6e-28 129.4 103 63.1
BolC4t27578H Brassica oleracea HOM05D005271 ORTHO05D006072 1.6e-28 129.4 103 63.1
BraA03t11049Z Brassica rapa HOM05D000364 ORTHO05D006072 2.1e-28 129.0 103 63.1
Carub.0004s1300 Capsella rubella HOM05D005271 ORTHO05D006072 2.7e-28 128.6 103 64.1
A04p24140 Brassica napus HOM05D005271 ORTHO05D006072 4.7e-28 127.9 103 62.1
A03p17850 Brassica napus HOM05D000364 ORTHO05D006072 6.1e-28 127.5 103 62.1
BraA04t17934Z Brassica rapa HOM05D005271 ORTHO05D006072 6.1e-28 127.5 103 63.1
Cpa.g.sc51.137 Carica papaya HOM05D005271 ORTHO05D006072 8.0e-28 127.1 103 64.1
MD10G1227700 Malus domestica HOM05D005271 ORTHO05D006072 8.0e-28 127.1 94 67.0
PGR142G2670 Punica granatum HOM05D005271 ORTHO05D006072 8.0e-28 127.1 103 62.1
BcaB01g04025 Brassica carinata HOM05D005271 ORTHO05D006072 1.4e-27 126.3 99 63.6
CAN.G350.33 Capsicum annuum HOM05D005271 ORTHO05D006072 1.8e-27 125.9 102 63.7
Dinv31186 Davidia involucrata HOM05D005271 ORTHO05D006072 1.8e-27 125.9 104 65.4
THA.LOC104800917 Tarenaya hassleriana HOM05D005271 ORTHO05D006072 1.8e-27 125.9 103 61.2
THA.LOC104815870 Tarenaya hassleriana HOM05D005271 ORTHO05D006072 1.8e-27 125.9 103 63.1
AT1G05780 Arabidopsis thaliana HOM05D005271 ORTHO05D006072 3.0e-27 125.2 104 63.5
CSS0040197 Camellia sinensis var. sinensis HOM05D005271 ORTHO05D006072 4.0e-27 124.8 104 64.4
Nitab4.5_0002741g0010 Nicotiana tabacum HOM05D005271 ORTHO05D006072 4.0e-27 124.8 102 60.8
Potri.001G160500 Populus trichocarpa HOM05D005271 ORTHO05D006072 5.2e-27 124.4 103 61.2
AL1G15680 Arabidopsis lyrata HOM05D005271 ORTHO05D006072 6.7e-27 124.0 104 63.5
CANSAT25G1004 Cannabis sativa HOM05D005271 ORTHO05D006072 6.7e-27 124.0 111 60.4
HanXRQChr06g0184021 Helianthus annuus HOM05D005271 ORTHO05D006072 6.7e-27 124.0 104 62.5
A05p13810 Brassica napus HOM05D005271 ORTHO05D006072 8.8e-27 123.6 103 62.1
C04p18180 Brassica napus HOM05D005271 ORTHO05D006072 8.8e-27 123.6 104 65.4
Rhsim04G0167900 Rhododendron simsii HOM05D005271 ORTHO05D006072 8.8e-27 123.6 103 63.1
Actinidia22429 Actinidia chinensis HOM05D005271 ORTHO05D006072 1.1e-26 123.2 104 63.5
Nitab4.5_0004741g0030 Nicotiana tabacum HOM05D005271 ORTHO05D006072 1.1e-26 123.2 102 60.8
vmacro03554 Vaccinium macrocarpon HOM05D005271 ORTHO05D006072 1.1e-26 123.2 103 61.2
BolC4t23374H Brassica oleracea HOM05D005271 ORTHO05D006072 1.5e-26 122.9 102 63.7
DCAR_002456 Daucus carota HOM05D005271 ORTHO05D006072 1.5e-26 122.9 104 63.5
DCAR_002458 Daucus carota HOM05D005271 ORTHO05D006072 1.5e-26 122.9 104 63.5
MD05G1247100 Malus domestica HOM05D005271 ORTHO05D006072 2.0e-26 122.5 92 67.4
Ah.05g173390 Amaranthus hybridus HOM05D005271 ORTHO05D006072 2.6e-26 122.1 86 68.6
Oeu017888.1 Olea europaea HOM05D005271 ORTHO05D006072 2.6e-26 122.1 103 61.2
Sed0007631 Sechium edule HOM05D005271 ORTHO05D006072 2.6e-26 122.1 102 63.7
Gohir.A10G107101 Gossypium hirsutum HOM05D005271 ORTHO05D006072 3.3e-26 121.7 103 62.1
ClCG01G025510 Citrullus lanatus HOM05D005271 ORTHO05D006072 4.4e-26 121.3 102 62.7
CARHR005290 Cardamine hirsuta HOM05D005271 ORTHO05D006072 9.7e-26 120.2 102 57.8
Hma1.2p1_0088F.1_g045170 Hydrangea macrophylla HOM05D005271 ORTHO05D006072 9.7e-26 120.2 104 61.5
PSO541G1812 Papaver somniferum HOM05D005271 ORTHO05D006072 1.3e-25 119.8 105 61.0
BcaC02g11279 Brassica carinata HOM05D005271 ORTHO05D006072 1.7e-25 119.4 104 63.5
TAR629G0996 Trochodendron aralioides HOM05D005271 ORTHO05D006072 2.2e-25 119.0 104 61.5
Migut.C01265 Erythranthe guttata HOM05D005271 ORTHO05D006072 3.7e-25 118.2 97 63.9
Migut.N03355 Erythranthe guttata HOM05D005271 ORTHO05D006072 4.8e-25 117.9 105 60.0
MSTRG.22460 Avicennia marina HOM05D005271 ORTHO05D006072 6.3e-25 117.5 103 59.2
Sopen11g025310 Solanum pennellii HOM05D005271 ORTHO05D006072 8.2e-25 117.1 84 67.9
CsaV3_6G052780 Cucumis sativus L. HOM05D005271 ORTHO05D006072 1.1e-24 116.7 102 60.8
PSO675G0749 Papaver somniferum HOM05D005271 ORTHO05D006072 1.1e-24 116.7 105 59.0
PSO782G3340 Papaver somniferum HOM05D005271 ORTHO05D006072 1.1e-24 116.7 106 59.4
Sabra01G0131700 Salix brachista HOM05D005271 ORTHO05D006072 1.1e-24 116.7 116 56.0
SGA_v2.0_scaffold149G36579 Striga asiatica HOM05D005271 ORTHO05D006072 1.1e-24 116.7 105 60.0
BcaB02g10411 Brassica carinata HOM05D000896 ORTHO05D006072 3.1e-24 115.2 104 62.5
Oeu021212.1 Olea europaea HOM05D005271 ORTHO05D006072 4.1e-24 114.8 103 63.1
Sc10g0007720 Simmondsia chinensis HOM05D005271 ORTHO05D006072 4.1e-24 114.8 96 59.4
GSVIVG01012142001 Vitis vinifera HOM05D005271 ORTHO05D006072 5.3e-24 114.4 93 66.7
MELO3C007032.2 Cucumis melo HOM05D005271 ORTHO05D006072 7.0e-24 114.0 102 58.8
PSO170G3626 Papaver somniferum HOM05D005271 ORTHO05D006072 1.2e-23 113.2 81 67.9
TAR627G0156 Trochodendron aralioides HOM05D005271 ORTHO05D006072 1.6e-23 112.8 101 57.4
Cc03_g07280 Coffea canephora HOM05D005271 ORTHO05D006072 2.7e-23 112.1 93 63.4
Aqoxy1G00251 Aquilegia oxysepala HOM05D005271 ORTHO05D006072 3.5e-23 111.7 104 59.6
Nn7g38328 Nelumbo nucifera HOM05D005271 ORTHO05D006072 3.5e-23 111.7 104 60.6
Rhsim12G0144200 Rhododendron simsii HOM05D005271 ORTHO05D006072 5.9e-23 110.9 124 51.6
EL10Ac1g00803 Beta vulgaris HOM05D005271 ORTHO05D006072 1.0e-22 110.2 84 64.3
unitig_0.g914 Utricularia gibba HOM05D000362 ORTHO05D000325 2.2e-22 109.0 105 56.2
CDE05G1696 Ceratophyllum demersum HOM05D005271 ORTHO05D006072 5.0e-22 107.8 87 63.2
SalBow1G3231 Salvia bowleyana HOM05D005271 ORTHO05D006072 1.5e-21 106.3 107 57.9
SalBow6G1192 Salvia bowleyana HOM05D005271 ORTHO05D006072 3.2e-21 105.1 107 57.0
SalBow7G2991 Salvia bowleyana HOM05D005271 ORTHO05D006072 3.2e-21 105.1 88 65.9
Ah.01g016950 Amaranthus hybridus HOM05D005271 ORTHO05D006072 5.5e-21 104.4 94 56.4
SGA_v2.0_scaffold118G32500 Striga asiatica HOM05D005271 ORTHO05D006072 7.2e-21 104.0 101 57.4
COL.COLO4_15978 Corchorus olitorius HOM05D005271 ORTHO05D006072 1.0e-19 100.1 74 71.6
ATR1120G033 Amborella trichopoda HOM05D005271 ORTHO05D006072 2.3e-19 99.0 104 51.9
CDE05G0701 Ceratophyllum demersum HOM05D005271 ORTHO05D006072 3.0e-19 98.6 104 52.9
AUR62023913 Chenopodium quinoa HOM05D005271 ORTHO05D006072 3.0e-19 98.6 86 59.3
Haze_05264 Corylus avellana HOM05D005271 ORTHO05D006072 3.0e-19 98.6 74 71.6
HPP92_012976 Vanilla planifolia HOM05D005271 ORTHO05D006072 1.5e-18 96.3 103 50.5
AUR62038333 Chenopodium quinoa HOM05D005271 ORTHO05D006072 7.5e-18 94.0 77 59.7
Eucgr.H02355 Eucalyptus grandis HOM05D005271 ORTHO05D006072 7.0e-16 87.4 74 60.8
Peaxi162Scf00004g02726 Petunia axillaris HOM05D005271 ORTHO05D006072 9.1e-16 87.0 72 66.7
Zm00001eb071020 Zea mays HOM05D005271 ORTHO05D006072 9.1e-16 87.0 89 51.7
Os04g0612900 Oryza sativa ssp. japonica HOM05D005271 ORTHO05D006072 1.2e-15 86.7 89 53.9
Mapoly0098s0021 Marchantia polymorpha HOM05D005271 ORTHO05D006072 5.9e-15 84.3 105 48.6
SMO300G0007 Selaginella moellendorffii HOM05D005271 ORTHO05D006072 5.9e-15 84.3 84 54.8
CSS0024418 Camellia sinensis var. sinensis HOM05D005271 ORTHO05D006072 1.3e-14 83.2 75 61.3
PGSC0003DMG400010917 Solanum tuberosum HOM05D005271 ORTHO05D006072 1.7e-14 82.8 70 61.4
Hund17073 Selenicereus undatus HOM05D005271 ORTHO05D006072 2.2e-14 82.4 66 65.2
EL10Ac9g21107 Beta vulgaris HOM05D005271 ORTHO05D006072 2.9e-14 82.0 63 61.9
AUR62004132 Chenopodium quinoa HOM05D005271 ORTHO05D006072 7.2e-13 77.4 51 72.5
Pp3c12_11530 Physcomitrium patens HOM05D005271 ORTHO05D006072 9.5e-13 77.0 100 45.0
Hund00748 Selenicereus undatus HOM05D005271 ORTHO05D006072 1.2e-12 76.6 57 63.2
MBI02_g01139_MAGBIO Magnolia biondii HOM05D005271 ORTHO05D006072 1.0e-11 73.6 58 65.5
MBI14_g01725_MAGBIO Magnolia biondii HOM05D005271 ORTHO05D006072 2.8e-09 65.5 50 68.0
CBR_g30301 Chara braunii HOM05D005271 ORTHO05D006072 2.4e-08 62.4 67 47.8
Zm00001eb430740 Zea mays HOM05D005271 ORTHO05D006072 9.2e-08 60.5 82 48.8
Aqoxy3G03156 Aquilegia oxysepala HOM05D005271 ORTHO05D006072 5.9e-07 57.8 70 52.9


User provided reference genes

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