Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr02g0149891 Lupinus albus HOM05D007581 ORTHO05D009250 7.4e-53 210.7 141 100.0
Lj2g0009073 Lotus japonicus HOM05D007581 ORTHO05D009250 3.3e-29 132.1 131 76.3
Phvul.004G128300 Phaseolus vulgaris HOM05D007581 ORTHO05D009250 8.2e-28 127.5 136 69.9
Glyma.16G205300 Glycine max HOM05D007581 ORTHO05D009250 3.4e-26 122.1 136 69.1
Nitab4.5_0006526g0010 Nicotiana tabacum HOM05D000128 ORTHO05D000059 8.5e-25 117.5 134 64.2
Nitab4.5_0000079g0010 Nicotiana tabacum HOM05D000128 ORTHO05D000059 2.5e-24 115.9 134 64.2
Peaxi162Scf00078g01222 Petunia axillaris HOM05D007581 ORTHO05D009250 2.5e-24 115.9 135 62.2
Medtr6g060172 Medicago truncatula HOM05D007581 ORTHO05D009250 4.2e-24 115.2 136 65.4
EL10Ac1g01297 Beta vulgaris HOM05D007581 ORTHO05D009250 5.5e-24 114.8 135 68.9
Haze_14032 Corylus avellana HOM05D007581 ORTHO05D009250 5.5e-24 114.8 133 69.2
CSS0015328 Camellia sinensis var. sinensis HOM05D007581 ORTHO05D009250 7.2e-24 114.4 143 61.5
MD00G1103300 Malus domestica HOM05D007581 ORTHO05D009250 2.1e-23 112.8 141 61.7
Glyma.09G154800 Glycine max HOM05D007581 ORTHO05D009250 2.7e-23 112.5 136 70.6
CiPaw.04G007300 Carya illinoinensis HOM05D007581 ORTHO05D009250 3.6e-23 112.1 131 70.2
FvH4_2g00130 Fragaria vesca HOM05D007581 ORTHO05D009250 3.6e-23 112.1 137 67.9
FAN24G1736 Fragaria x ananassa HOM05D007581 ORTHO05D009250 3.6e-23 112.1 137 67.9
Eucgr.F04100 Eucalyptus grandis HOM05D007581 ORTHO05D009250 4.6e-23 111.7 130 68.5
PGSC0003DMG400016228 Solanum tuberosum HOM05D007581 ORTHO05D009250 6.1e-23 111.3 135 63.7
Dinv37395 Davidia involucrata HOM05D007581 ORTHO05D009250 1.0e-22 110.5 136 70.6
SGA_v2.0_scaffold118G32651 Striga asiatica HOM05D007581 ORTHO05D009250 1.4e-22 110.2 140 59.3
GSVIVG01037110001 Vitis vinifera HOM05D007581 ORTHO05D009250 1.8e-22 109.8 137 63.5
Aqoxy6G00030 Aquilegia oxysepala HOM05D007581 ORTHO05D009250 1.1e-21 107.1 136 62.5
FAN19G1324 Fragaria x ananassa HOM05D007581 ORTHO05D009250 1.1e-21 107.1 139 60.4
ECA247G3877 Erigeron canadensis HOM05D007581 ORTHO05D009250 1.5e-21 106.7 134 61.9
Ca_02136_v3 Cicer arietinum L. HOM05D007581 ORTHO05D009250 3.3e-21 105.5 136 70.6
TWI18G0093 Tripterygium wilfordii HOM05D007581 ORTHO05D009250 7.4e-21 104.4 129 67.4
Lalb_Chr01g0008751 Lupinus albus HOM05D007581 ORTHO05D009250 9.7e-21 104.0 129 69.8
Sopen11g004800 Solanum pennellii HOM05D007581 ORTHO05D009250 1.3e-20 103.6 135 60.7
CAN.G630.61 Capsicum annuum HOM05D007581 ORTHO05D009250 2.2e-20 102.8 129 62.8
Sc26g0002080 Simmondsia chinensis HOM05D007581 ORTHO05D009250 2.2e-20 102.8 131 64.9
Prupe.8G001100 Prunus persica HOM05D007581 ORTHO05D009250 2.8e-20 102.4 141 58.9
Manes.15G183800 Manihot esculenta HOM05D007581 ORTHO05D009250 6.3e-20 101.3 130 60.8
Cc10_g16220 Coffea canephora HOM05D007581 ORTHO05D009250 1.4e-19 100.1 127 67.7
Thhalv10029062m.g Eutrema salsugineum HOM05D007581 ORTHO05D009250 2.4e-19 99.4 129 63.6
Potri.019G063300 Populus trichocarpa HOM05D007581 ORTHO05D009250 2.4e-19 99.4 138 55.1
Solyc11g009030.1 Solanum lycopersicum HOM05D007581 ORTHO05D009250 2.4e-19 99.4 135 63.0
ClCG08G001940 Citrullus lanatus HOM05D007581 ORTHO05D009250 9.1e-19 97.4 130 63.1
Gohir.D08G248900 Gossypium hirsutum HOM05D007581 ORTHO05D009250 9.1e-19 97.4 128 59.4
Atru.chr13.2628 Acer truncatum HOM05D007581 ORTHO05D009250 1.2e-18 97.1 142 58.5
MBI06_g43033_MAGBIO Magnolia biondii HOM05D007581 ORTHO05D009250 1.2e-18 97.1 141 59.6
Sabra19G0076500 Salix brachista HOM05D007581 ORTHO05D009250 1.5e-18 96.7 138 59.4
Sabra19G0080300 Salix brachista HOM05D007581 ORTHO05D009250 1.5e-18 96.7 138 59.4
TAR628G1203 Trochodendron aralioides HOM05D007581 ORTHO05D009250 2.6e-18 95.9 138 64.5
Aa31LG9G11680 Aethionema arabicum HOM05D007581 ORTHO05D009250 4.5e-18 95.1 136 60.3
Duzib116G0131 Durio zibethinus HOM05D007581 ORTHO05D009250 7.7e-18 94.4 136 60.3
AT4G10330 Arabidopsis thaliana HOM05D007581 ORTHO05D009250 1.3e-17 93.6 130 56.9
Sed0022412 Sechium edule HOM05D007581 ORTHO05D009250 1.3e-17 93.6 141 60.3
MELO3C022112.2 Cucumis melo HOM05D007581 ORTHO05D009250 1.7e-17 93.2 142 59.2
QL09p000889 Quercus lobata HOM05D007581 ORTHO05D009250 2.2e-17 92.8 127 64.6
Cpa.g.sc21.238 Carica papaya HOM05D007581 ORTHO05D009250 2.9e-17 92.4 90 71.1
CsaV3_5G039340 Cucumis sativus L. HOM05D007581 ORTHO05D009250 2.9e-17 92.4 140 59.3
Sp6g07100 Schrenkiella parvula HOM05D007581 ORTHO05D009250 2.9e-17 92.4 130 60.8
CANSAT25G1375 Cannabis sativa HOM05D007581 ORTHO05D009250 6.5e-17 91.3 128 60.9
CANSAT25G2017 Cannabis sativa HOM05D007581 ORTHO05D009250 6.5e-17 91.3 128 60.9
BcaB05g23909 Brassica carinata HOM05D007581 ORTHO05D009250 8.5e-17 90.9 129 58.9
Migut.C01409 Erythranthe guttata HOM05D007581 ORTHO05D009250 8.5e-17 90.9 139 60.4
BolC2t10277H Brassica oleracea HOM05D007581 ORTHO05D009250 1.4e-16 90.1 137 57.7
Gohir.A08G228600 Gossypium hirsutum HOM05D007581 ORTHO05D009250 1.4e-16 90.1 128 60.9
TPR.G20128 Trifolium pratense HOM05D007581 ORTHO05D009250 2.5e-16 89.4 127 66.1
Gorai.004G265500 Gossypium raimondii HOM05D007581 ORTHO05D009250 3.2e-16 89.0 128 60.9
Hund16921 Selenicereus undatus HOM05D007581 ORTHO05D009250 4.2e-16 88.6 137 62.8
PSO210G2853 Papaver somniferum HOM05D007581 ORTHO05D009250 7.2e-16 87.8 142 58.5
Os01g0886500 Oryza sativa ssp. japonica HOM05D007581 ORTHO05D009250 9.4e-16 87.4 130 49.2
Psat1g111920 Pisum sativum HOM05D007581 ORTHO05D009250 1.2e-15 87.0 118 61.9
MSTRG.25512 Avicennia marina HOM05D007581 ORTHO05D009250 3.6e-15 85.5 135 60.7
Ciclev10022815m.g Citrus clementina HOM05D007581 ORTHO05D009250 3.6e-15 85.5 134 58.2
RcHm_v2.0_Chr6g0249391 Rosa chinensis HOM05D007581 ORTHO05D009250 6.1e-15 84.7 136 61.0
Nn5g27166 Nelumbo nucifera HOM05D007581 ORTHO05D009250 1.8e-14 83.2 141 61.7
Lsat_1_v5_gn_1_24761 Lactuca sativa HOM05D007581 ORTHO05D009250 5.2e-14 81.6 132 56.8
HPP92_009197 Vanilla planifolia HOM05D007581 ORTHO05D009250 5.2e-14 81.6 129 58.9
Zm00001eb145430 Zea mays HOM05D007581 ORTHO05D009250 5.7e-13 78.2 130 53.8
A02p26660 Brassica napus HOM05D007581 ORTHO05D009250 9.7e-13 77.4 129 56.6
BraA02t07670Z Brassica rapa HOM05D007581 ORTHO05D009250 9.7e-13 77.4 129 56.6
BcaC03g16403 Brassica carinata HOM05D007581 ORTHO05D009250 1.3e-12 77.0 137 54.7
C02p42350 Brassica napus HOM05D007581 ORTHO05D009250 1.3e-12 77.0 137 54.7
CARHR256310 Cardamine hirsuta HOM05D007581 ORTHO05D009250 2.8e-12 75.9 134 51.5
VMungo0464G1076 Vigna mungo HOM05D007581 ORTHO05D009250 2.8e-12 75.9 115 61.7
MD05G1000400 Malus domestica HOM05D007581 ORTHO05D009250 6.3e-12 74.7 110 62.7
ATR1089G122 Amborella trichopoda HOM05D007581 ORTHO05D009250 1.1e-11 73.9 135 56.3
Carub.0006s2893 Capsella rubella HOM05D007581 ORTHO05D009250 1.4e-11 73.6 127 52.0
THA.LOC104815611 Tarenaya hassleriana HOM05D007581 ORTHO05D009250 1.8e-11 73.2 129 55.0
Os11g0242700 Oryza sativa ssp. japonica HOM05D007581 ORTHO05D009250 2.4e-11 72.8 140 55.0
AL6G44200 Arabidopsis lyrata HOM05D007581 ORTHO05D009250 9.1e-11 70.9 127 55.1
DCAR_014049 Daucus carota HOM05D000133 ORTHO05D000259 1.2e-10 70.5 161 46.6
Zm00001eb168090 Zea mays HOM05D007581 ORTHO05D009250 2.9e-09 65.9 139 53.2
AUR62013400 Chenopodium quinoa HOM05D007581 ORTHO05D009250 3.8e-09 65.5 172 45.3
unitig_578.g16109 Utricularia gibba HOM05D007581 ORTHO05D009250 1.5e-08 63.5 131 55.7
MD02G1202800 Malus domestica HOM05D007581 ORTHO05D009250 2.5e-08 62.8 95 52.6
Dinv25473 Davidia involucrata HOM05D007581 ORTHO05D009250 5.5e-08 61.6 59 54.2
Oeu028611.1 Olea europaea HOM05D007581 ORTHO05D009250 5.5e-08 61.6 99 61.6
PSO761G0508 Papaver somniferum HOM05D007581 ORTHO05D009250 9.4e-08 60.8 111 59.5
TWI75G0477 Tripterygium wilfordii HOM05D007581 ORTHO05D009250 2.7e-07 59.3 99 67.7
COL.COLO4_25109 Corchorus olitorius HOM05D007581 ORTHO05D009250 1.4e-06 57.0 110 57.3
HanXRQChr04g0102981 Helianthus annuus HOM05D007581 ORTHO05D009250 1.4e-06 57.0 92 66.3


User provided reference genes

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