Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr02g0147471 Lupinus albus HOM05D012338 ORTHO05D010151 0.0e+00 1163.7 780 100.0
Lalb_Chr06g0167251 Lupinus albus HOM05D012338 ORTHO05D010151 1.3e-151 541.2 777 54.6
Lalb_Chr21g0310001 Lupinus albus HOM05D012338 ORTHO05D010151 2.8e-138 496.9 791 48.9
Lj5g0017234 Lotus japonicus HOM05D012338 ORTHO05D010151 2.1e-80 304.7 969 38.5
Phvul.007G206100 Phaseolus vulgaris HOM05D012338 ORTHO05D010151 1.8e-63 248.4 996 37.3
Ca_10209_v3 Cicer arietinum L. HOM05D012338 ORTHO05D010151 9.7e-62 242.7 872 38.3
VMungo0720G3156 Vigna mungo HOM05D012338 ORTHO05D010151 1.0e-58 232.6 1013 33.3
Psat6g155960 Pisum sativum HOM05D012338 ORTHO05D010151 1.1e-57 229.2 506 41.9
Glyma.20G091100 Glycine max HOM05D012338 ORTHO05D010151 1.4e-57 228.8 897 35.7
TPR.G34898 Trifolium pratense HOM05D012338 ORTHO05D010151 9.1e-52 209.5 281 54.4
Glyma.10G142500 Glycine max HOM05D012338 ORTHO05D010151 1.0e-42 179.5 597 35.2
Medtr1g084990 Medicago truncatula HOM05D012338 ORTHO05D010151 3.6e-40 171.0 506 37.4
Haze_15013 Corylus avellana HOM05D010591 ORTHO05D010151 3.3e-17 94.7 602 32.2
Prupe.6G303400 Prunus persica HOM05D016522 ORTHO05D010151 4.0e-15 87.8 256 33.6
QL03p011177 Quercus lobata HOM05D010591 ORTHO05D010151 1.5e-14 85.9 96 60.4
arahy.Tifrunner.gnm1.ann1.15ZR5C Arachis hypogaea HOM05D051797 ORTHO05D010151 4.4e-14 84.3 818 33.5
RcHm_v2.0_Chr3g0458711 Rosa chinensis HOM05D016522 ORTHO05D010151 7.5e-14 83.6 275 34.9
Manes.09G181900 Manihot esculenta HOM05D010591 ORTHO05D010151 1.7e-13 82.4 529 32.1
Rhsim11G0106300 Rhododendron simsii HOM05D023883 ORTHO05D010151 1.7e-13 82.4 350 33.4
Sabra13G0001000 Salix brachista HOM05D010591 ORTHO05D010151 4.9e-13 80.9 318 30.5
arahy.Tifrunner.gnm1.ann1.V2HZSR Arachis hypogaea HOM05D051797 ORTHO05D010151 3.2e-12 78.2 819 33.9
Potri.013G001150 Populus trichocarpa HOM05D010591 ORTHO05D010151 5.4e-12 77.4 281 30.2
TAR362G0209 Trochodendron aralioides HOM05D010591 ORTHO05D010151 7.0e-12 77.0 309 33.0
MD12G1198800 Malus domestica HOM05D016522 ORTHO05D010151 8.6e-10 70.1 69 63.8
FAN05G3620 Fragaria x ananassa HOM05D016522 ORTHO05D010151 1.5e-09 69.3 68 60.3
TAR633G2217 Trochodendron aralioides HOM05D010591 ORTHO05D010151 1.5e-09 69.3 311 31.2
FvH4_6g08611 Fragaria vesca HOM05D016522 ORTHO05D010151 5.6e-09 67.4 58 63.8
FAN02G4605 Fragaria x ananassa HOM05D016522 ORTHO05D010151 5.6e-09 67.4 66 59.1
MELO3C015237.2 Cucumis melo HOM05D017194 ORTHO05D010151 7.3e-09 67.0 336 29.5
FAN09G2016 Fragaria x ananassa HOM05D016522 ORTHO05D010151 1.2e-08 66.2 64 60.9
TAR365G0948 Trochodendron aralioides HOM05D010591 ORTHO05D010151 1.2e-08 66.2 247 33.6
CsaV3_1G038080 Cucumis sativus L. HOM05D017194 ORTHO05D010151 6.2e-08 63.9 333 30.0
Cfa004395 Carpinus fangiana HOM05D010591 ORTHO05D010151 1.4e-07 62.8 839 26.0
Sabra05G0013900 Salix brachista HOM05D010591 ORTHO05D010151 1.4e-07 62.8 559 27.7
GSVIVG01031340001 Vitis vinifera HOM05D010591 ORTHO05D010151 1.4e-07 62.8 309 28.8
Actinidia11694 Actinidia chinensis HOM05D023883 ORTHO05D010151 3.1e-07 61.6 313 31.0
Actinidia17734 Actinidia chinensis HOM05D023883 ORTHO05D010151 4.0e-07 61.2 545 31.0
Potri.005G001700 Populus trichocarpa HOM05D010591 ORTHO05D010151 4.0e-07 61.2 813 28.0
CANSAT54G2363 Cannabis sativa HOM05D017194 ORTHO05D010151 6.8e-07 60.5 311 31.5
ClCG03G017920 Citrullus lanatus HOM05D017194 ORTHO05D010151 6.8e-07 60.5 343 28.6
Manes.08G107000 Manihot esculenta HOM05D010591 ORTHO05D010151 6.8e-07 60.5 499 26.1
CiPaw.01G001100 Carya illinoinensis HOM05D010591 ORTHO05D010151 8.9e-07 60.1 69 56.5
CARHR186870 Cardamine hirsuta HOM05D010296 ORTHO05D011853 1.2e-06 59.7 125 44.0
FAN05G1532 Fragaria x ananassa HOM05D011814 ORTHO05D010480 1.2e-06 59.7 80 55.0
FAN12G1733 Fragaria x ananassa HOM05D011814 ORTHO05D010151 1.2e-06 59.7 80 55.0
FAN23G0450 Fragaria x ananassa HOM05D011814 ORTHO05D010151 1.5e-06 59.3 80 55.0
Dinv30954 Davidia involucrata HOM05D010591 ORTHO05D010151 2.0e-06 58.9 331 29.3
FAN12G3175 Fragaria x ananassa HOM05D011814 ORTHO05D010151 2.0e-06 58.9 80 55.0
TWI56G1225 Tripterygium wilfordii HOM05D010591 ORTHO05D010151 2.0e-06 58.9 178 37.1
Sp3g04790 Schrenkiella parvula HOM05D010296 ORTHO05D011853 2.6e-06 58.5 344 31.7
FvH4_4g21781 Fragaria vesca HOM05D011814 ORTHO05D010151 7.5e-06 57.0 80 53.8
AL3G16660 Arabidopsis lyrata HOM05D010296 ORTHO05D011853 9.8e-06 56.6 120 44.2
FAN17G3034 Fragaria x ananassa HOM05D011814 ORTHO05D010151 9.8e-06 56.6 125 40.8


User provided reference genes

Program Settings