Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr02g0147351 Lupinus albus HOM05D008494 ORTHO05D010021 7.8e-58 226.9 111 100.0
Glyma.19G223900 Glycine max HOM05D008494 ORTHO05D010021 5.8e-29 131.0 105 66.7
Glyma.03G227000 Glycine max HOM05D008494 ORTHO05D010021 9.9e-29 130.2 104 66.3
VMungo1383G1264 Vigna mungo HOM05D008494 ORTHO05D010021 3.8e-28 128.3 105 61.0
Lalb_Chr04g0260271 Lupinus albus HOM05D008494 ORTHO05D010021 3.9e-25 118.2 110 54.5
Lalb_Chr21g0309951 Lupinus albus HOM05D008494 ORTHO05D010021 5.1e-25 117.9 67 86.6
Phvul.001G220800 Phaseolus vulgaris HOM05D008494 ORTHO05D010021 2.5e-24 115.5 105 54.3
QL03p011411 Quercus lobata HOM05D008494 ORTHO05D010021 2.5e-24 115.5 90 58.9
Medtr7g111200 Medicago truncatula HOM05D008494 ORTHO05D010021 9.6e-24 113.6 109 60.6
Lj1g0018830 Lotus japonicus HOM05D008494 ORTHO05D010021 2.8e-23 112.1 109 58.7
Haze_15004 Corylus avellana HOM05D008494 ORTHO05D010021 1.4e-22 109.8 93 58.1
Cfa004401 Carpinus fangiana HOM05D008494 ORTHO05D010021 2.4e-22 109.0 103 52.4
Manes.08G105911 Manihot esculenta HOM05D008494 ORTHO05D010021 7.6e-21 104.0 102 51.0
FAN14G1748 Fragaria x ananassa HOM05D008494 ORTHO05D010021 1.3e-20 103.2 105 52.4
Prupe.6G302200 Prunus persica HOM05D008494 ORTHO05D010021 2.2e-20 102.4 90 56.7
TPR.G1638 Trifolium pratense HOM05D008494 ORTHO05D010021 6.5e-20 100.9 93 62.4
Oeu033225.1 Olea europaea HOM05D008494 ORTHO05D010021 1.1e-19 100.1 92 52.2
RcHm_v2.0_Chr3g0459041 Rosa chinensis HOM05D008494 ORTHO05D010021 1.9e-19 99.4 88 53.4
Peaxi162Scf00194g00512 Petunia axillaris HOM05D008494 ORTHO05D010021 1.0e-17 93.6 88 51.1
MD04G1183700 Malus domestica HOM05D008494 ORTHO05D010021 1.3e-17 93.2 97 50.5
Manes.09G182700 Manihot esculenta HOM05D008494 ORTHO05D010021 1.8e-17 92.8 102 45.1
CiPaw.02G000600 Carya illinoinensis HOM05D008494 ORTHO05D010021 6.7e-17 90.9 104 45.2
Oeu000174.1 Olea europaea HOM05D008494 ORTHO05D010021 2.5e-16 89.0 89 51.7
DCAR_029308 Daucus carota HOM05D008494 ORTHO05D010021 3.3e-16 88.6 99 45.5
arahy.Tifrunner.gnm1.ann1.J2KNI4 Arachis hypogaea HOM05D008494 ORTHO05D010021 7.4e-16 87.4 93 52.7
Ciclev10030055m.g Citrus clementina HOM05D008494 ORTHO05D010021 2.2e-15 85.9 104 45.2
Atru.chr12.1501 Acer truncatum HOM05D008494 ORTHO05D010021 4.1e-14 81.6 93 46.2
Atru.chr12.1506 Acer truncatum HOM05D008494 ORTHO05D010021 4.1e-14 81.6 93 46.2
Solyc01g102430.2 Solanum lycopersicum HOM05D008494 ORTHO05D010021 5.3e-14 81.3 89 49.4
Potri.013G000100 Populus trichocarpa HOM05D008494 ORTHO05D010021 9.0e-14 80.5 98 42.9
SGA_v2.0_scaffold311G48250 Striga asiatica HOM05D008494 ORTHO05D010021 1.0e-12 77.0 89 46.1
Rhsim11G0107000 Rhododendron simsii HOM05D000136 ORTHO05D000080 1.3e-12 76.6 88 44.3
Peaxi162Scf00071g00117 Petunia axillaris HOM05D008494 ORTHO05D010021 6.5e-12 74.3 87 39.1
DCAR_003254 Daucus carota HOM05D008494 ORTHO05D010021 1.4e-11 73.2 105 38.1
Potri.005G000800 Populus trichocarpa HOM05D008494 ORTHO05D010021 2.7e-10 68.9 99 41.4
Thecc.05G331500 Theobroma cacao HOM05D008494 ORTHO05D010021 6.1e-10 67.8 93 40.9
Actinidia17727 Actinidia chinensis HOM05D008494 ORTHO05D010021 1.0e-09 67.0 60 53.3
Nitab4.5_0004090g0020 Nicotiana tabacum HOM05D008494 ORTHO05D010021 3.0e-09 65.5 70 48.6
ECA234G2754 Erigeron canadensis HOM05D008494 ORTHO05D010021 3.9e-09 65.1 89 37.1
Thhalv10005177m.g Eutrema salsugineum HOM05D003663 ORTHO05D010021 1.5e-08 63.2 88 38.6
Carub.0006s2421 Capsella rubella HOM05D003663 ORTHO05D010021 2.5e-08 62.4 90 38.9
Hma1.2p1_0157F.1_g069490 Hydrangea macrophylla HOM05D008494 ORTHO05D010021 4.3e-08 61.6 67 46.3
Migut.B00913 Erythranthe guttata HOM05D008494 ORTHO05D010021 9.7e-08 60.5 94 38.3
Sp2g21380 Schrenkiella parvula HOM05D003663 ORTHO05D010021 1.7e-07 59.7 88 39.8
Dinv30960 Davidia involucrata HOM05D008494 ORTHO05D010021 4.8e-07 58.2 69 50.7
Nn4g25250 Nelumbo nucifera HOM05D008494 ORTHO05D010021 4.8e-07 58.2 87 34.5
BcaC04g23625 Brassica carinata HOM05D003663 ORTHO05D010021 1.4e-06 56.6 85 38.8
THA.LOC104803108 Tarenaya hassleriana HOM05D003663 ORTHO05D010021 2.4e-06 55.8 89 34.8
Ah.02g121360 Amaranthus hybridus HOM05D008494 ORTHO05D010021 3.1e-06 55.5 76 43.4


User provided reference genes

Program Settings