Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 5.7e-63 244.2 135 100.0
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 3.7e-46 188.3 137 78.1
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 6.4e-46 187.6 135 80.7
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 8.3e-46 187.2 137 80.3
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 2.7e-44 182.2 137 77.4
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 2.7e-44 182.2 137 78.1
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 4.6e-44 181.4 138 79.0
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 6.6e-43 177.6 136 75.7
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 8.6e-43 177.2 136 75.7
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 3.3e-42 175.3 131 75.6
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 9.5e-42 173.7 129 77.5
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 7.6e-39 164.1 138 69.6
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 1.3e-35 153.3 111 74.8
Glyma.20G089200 Glycine max HOM05D006057 ORTHO05D007224 3.6e-33 145.2 146 62.3
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 4.4e-31 138.3 124 65.3
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 9.9e-31 137.1 108 69.4
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 2.9e-30 135.6 122 64.8
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 2.9e-30 135.6 110 67.3
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 3.8e-30 135.2 122 64.8
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 4.9e-30 134.8 123 64.2
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 8.4e-30 134.0 128 64.1
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 8.4e-30 134.0 128 64.1
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 1.4e-29 133.3 128 60.9
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 1.9e-29 132.9 121 62.0
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 4.2e-29 131.7 125 61.6
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 5.4e-29 131.3 121 60.3
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 5.4e-29 131.3 121 60.3
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 5.4e-29 131.3 127 61.4
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 7.1e-29 131.0 119 63.9
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 7.1e-29 131.0 125 59.2
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 9.3e-29 130.6 111 64.9
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 9.3e-29 130.6 129 63.6
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 1.6e-28 129.8 121 60.3
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 2.1e-28 129.4 118 63.6
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 2.7e-28 129.0 119 63.0
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 2.7e-28 129.0 119 63.0
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 2.7e-28 129.0 119 63.0
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 2.7e-28 129.0 121 59.5
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 2.7e-28 129.0 118 61.9
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 3.5e-28 128.6 122 59.0
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 4.6e-28 128.3 122 63.1
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 6.0e-28 127.9 128 60.2
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 7.8e-28 127.5 119 63.0
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 7.8e-28 127.5 119 63.0
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 7.8e-28 127.5 121 59.5
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 7.8e-28 127.5 125 60.8
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 1.3e-27 126.7 122 63.9
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 1.7e-27 126.3 126 61.9
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 1.7e-27 126.3 124 62.9
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 3.0e-27 125.6 122 58.2
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 3.0e-27 125.6 123 60.2
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 3.0e-27 125.6 131 58.0
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 8.7e-27 124.0 121 58.7
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 8.7e-27 124.0 121 58.7
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 8.7e-27 124.0 84 75.0
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 8.7e-27 124.0 126 57.9
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 8.7e-27 124.0 126 57.9
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 8.7e-27 124.0 123 59.3
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 8.7e-27 124.0 107 63.6
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 8.7e-27 124.0 110 60.0
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.5e-26 123.2 96 66.7
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 1.9e-26 122.9 122 59.8
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 2.5e-26 122.5 106 63.2
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 2.5e-26 122.5 126 61.9
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 3.3e-26 122.1 128 57.0
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 3.3e-26 122.1 89 68.5
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 4.3e-26 121.7 131 58.0
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 7.3e-26 120.9 103 60.2
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 9.6e-26 120.6 123 59.3
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 9.6e-26 120.6 129 58.9
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 1.6e-25 119.8 118 58.5
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.6e-25 119.8 120 55.0
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 2.1e-25 119.4 123 59.3
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 2.8e-25 119.0 86 67.4
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 3.6e-25 118.6 126 56.3
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 4.8e-25 118.2 123 58.5
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 1.4e-24 116.7 127 56.7
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 1.8e-24 116.3 132 56.8
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 1.8e-24 116.3 120 60.0
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 5.3e-24 114.8 84 70.2
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 5.3e-24 114.8 131 55.0
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 6.9e-24 114.4 121 57.9
TPR.G3076 Trifolium pratense HOM05D006057 ORTHO05D007224 9.0e-24 114.0 95 73.7
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 3.4e-23 112.1 80 70.0
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 4.5e-23 111.7 116 56.0
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 5.8e-23 111.3 128 56.2
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 5.8e-23 111.3 116 56.0
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 5.8e-23 111.3 122 58.2
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 7.6e-23 110.9 116 56.0
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 2.9e-22 109.0 84 65.5
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 4.9e-22 108.2 120 53.3
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 4.9e-22 108.2 120 55.0
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 6.4e-22 107.8 115 55.7
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 8.4e-22 107.5 124 50.8
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 8.4e-22 107.5 115 55.7
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 8.4e-22 107.5 119 53.8
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 1.4e-21 106.7 112 55.4
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 2.4e-21 105.9 102 55.9
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 2.4e-21 105.9 126 51.6
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 3.2e-21 105.5 126 52.4
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 3.2e-21 105.5 119 52.9
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 4.2e-21 105.1 119 50.4
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 7.1e-21 104.4 124 50.0
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 1.2e-20 103.6 121 48.8
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 1.6e-20 103.2 121 50.4
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 3.5e-20 102.1 124 52.4
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 6.0e-20 101.3 127 48.0
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 6.0e-20 101.3 123 47.2
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 2.3e-19 99.4 126 47.6
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 3.0e-19 99.0 125 46.4
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 1.1e-18 97.1 132 47.7
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 4.3e-18 95.1 66 71.2
CiPaw.07G127700 Carya illinoinensis HOM05D006057 ORTHO05D007224 5.6e-18 94.7 108 54.6
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 1.3e-17 93.6 116 45.7
Potri.002G184600 Populus trichocarpa HOM05D006057 ORTHO05D007224 1.6e-17 93.2 106 54.7
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 2.8e-17 92.4 113 46.0
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 1.1e-16 90.5 84 53.6
BcaNung05508 Brassica carinata HOM05D006057 ORTHO05D007224 1.8e-16 89.7 113 49.6
Gorai.001G149000 Gossypium raimondii HOM05D006057 ORTHO05D007224 3.1e-16 89.0 63 69.8
Gohir.D07G136950 Gossypium hirsutum HOM05D006057 ORTHO05D007224 3.4e-15 85.5 63 71.4
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 1.3e-14 83.6 83 53.0
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 6.2e-09 64.7 116 35.3
Mapoly0076s0084 Marchantia polymorpha HOM05D006057 ORTHO05D007224 3.1e-08 62.4 108 38.0
TPR.G2637 Trifolium pratense HOM05D006057 ORTHO05D007224 9.0e-08 60.8 100 49.0
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 1.2e-07 60.5 111 36.0
Ah.15g097910 Amaranthus hybridus HOM05D012832 ORTHO05D019522 4.9e-06 55.1 38 63.2
Ah.15g098350 Amaranthus hybridus HOM05D012832 ORTHO05D019522 4.9e-06 55.1 38 63.2


User provided reference genes

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