Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr02g0147191 Lupinus albus HOM05D005434 ORTHO05D006412 0.0e+00 1147.1 591 100.0
Lj5g0001301 Lotus japonicus HOM05D005434 ORTHO05D006412 1.9e-142 510.4 592 54.9
Glyma.02G007100 Glycine max HOM05D005434 ORTHO05D006412 3.8e-135 486.1 542 56.8
arahy.Tifrunner.gnm1.ann1.9BA1LG Arachis hypogaea HOM05D005434 ORTHO05D006412 5.3e-129 465.7 565 52.4
Glyma.10G138700 Glycine max HOM05D005434 ORTHO05D006412 5.3e-129 465.7 614 51.0
Phvul.007G208600 Phaseolus vulgaris HOM05D005434 ORTHO05D006412 7.7e-128 461.8 580 53.1
arahy.Tifrunner.gnm1.ann1.G6BN46 Arachis hypogaea HOM05D005434 ORTHO05D006412 3.9e-124 449.5 574 51.4
Medtr1g085710 Medicago truncatula HOM05D005434 ORTHO05D006412 1.3e-122 444.5 583 51.6
Psat6g158560 Pisum sativum HOM05D005434 ORTHO05D006412 2.8e-122 443.4 582 50.9
TPR.G3083 Trifolium pratense HOM05D005434 ORTHO05D006412 1.4e-121 441.0 560 53.0
Ca_10237_v3 Cicer arietinum L. HOM05D005434 ORTHO05D006412 5.5e-118 429.1 544 52.2
VMungo0720G1215 Vigna mungo HOM05D005434 ORTHO05D006412 5.3e-113 412.5 543 51.2
Manes.05G008100 Manihot esculenta HOM05D005434 ORTHO05D006412 8.9e-68 262.3 586 35.8
QL12p035062 Quercus lobata HOM05D005434 ORTHO05D006412 1.7e-66 258.1 581 37.0
Prupe.3G001600 Prunus persica HOM05D005434 ORTHO05D006412 4.4e-59 233.4 614 34.5
MD09G1291300 Malus domestica HOM05D005434 ORTHO05D006412 7.6e-59 232.6 597 33.7
Duzib133G0025 Durio zibethinus HOM05D005434 ORTHO05D006412 5.4e-57 226.5 602 35.5
Haze_05156 Corylus avellana HOM05D005434 ORTHO05D006412 1.2e-56 225.3 595 34.3
Atru.chr5.851 Acer truncatum HOM05D005434 ORTHO05D006412 3.9e-55 220.3 587 33.6
COL.COLO4_23119 Corchorus olitorius HOM05D005434 ORTHO05D006412 9.6e-54 215.7 581 35.6
Duzib138G0614 Durio zibethinus HOM05D005434 ORTHO05D006412 3.6e-53 213.8 592 36.5
Thecc.01G326300 Theobroma cacao HOM05D005434 ORTHO05D006412 8.1e-53 212.6 599 35.6
MD17G1286100 Malus domestica HOM05D005434 ORTHO05D006412 2.9e-50 204.1 604 31.1
Potri.002G186200 Populus trichocarpa HOM05D005434 ORTHO05D006412 8.4e-50 202.6 640 30.9
Actinidia20964 Actinidia chinensis HOM05D005434 ORTHO05D006412 2.4e-49 201.1 571 33.3
CiPaw.08G081800 Carya illinoinensis HOM05D005434 ORTHO05D006412 1.2e-48 198.7 583 33.6
Ciclev10019510m.g Citrus clementina HOM05D005434 ORTHO05D006412 4.6e-48 196.8 568 32.7
CSS0010810 Camellia sinensis var. sinensis HOM05D005434 ORTHO05D006412 7.9e-48 196.1 570 32.6
Dinv12078 Davidia involucrata HOM05D005434 ORTHO05D006412 3.0e-47 194.1 451 35.5
Potri.014G111500 Populus trichocarpa HOM05D005434 ORTHO05D006412 1.1e-44 185.7 641 29.5
Gohir.A07G131800 Gossypium hirsutum HOM05D005434 ORTHO05D006412 1.4e-44 185.3 526 35.4
RcHm_v2.0_Chr3g0485651 Rosa chinensis HOM05D005434 ORTHO05D006412 2.4e-44 184.5 591 31.1
Gorai.001G148200 Gossypium raimondii HOM05D005434 ORTHO05D006412 3.1e-44 184.1 516 35.5
Gohir.D07G136100 Gossypium hirsutum HOM05D005434 ORTHO05D006412 2.6e-43 181.0 515 35.1
GSVIVG01028240001 Vitis vinifera HOM05D005434 ORTHO05D006412 2.6e-43 181.0 583 32.2
Sed0005889 Sechium edule HOM05D005434 ORTHO05D006412 7.1e-41 172.9 575 32.3
Sabra14G0081900 Salix brachista HOM05D005434 ORTHO05D006412 9.3e-41 172.6 608 29.1
ClCG02G017720 Citrullus lanatus HOM05D005434 ORTHO05D006412 3.3e-38 164.1 593 31.0
CiPaw.07G126300 Carya illinoinensis HOM05D005434 ORTHO05D006412 9.6e-38 162.5 615 29.9
Gohir.A11G105400 Gossypium hirsutum HOM05D005434 ORTHO05D006412 1.6e-37 161.8 651 30.0
CsaV3_6G012840 Cucumis sativus L. HOM05D005434 ORTHO05D006412 1.8e-36 158.3 590 32.0
Rhsim02G0256300 Rhododendron simsii HOM05D005434 ORTHO05D006412 5.3e-36 156.8 590 31.2
TWI14G0253 Tripterygium wilfordii HOM05D005434 ORTHO05D006412 6.9e-36 156.4 655 29.0
TWI23G0760 Tripterygium wilfordii HOM05D005434 ORTHO05D006412 1.2e-35 155.6 659 27.9
Gorai.007G117900 Gossypium raimondii HOM05D005434 ORTHO05D006412 1.7e-34 151.8 649 29.3
FAN19G2204 Fragaria x ananassa HOM05D005434 ORTHO05D006412 2.9e-34 151.0 663 28.5
FvH4_1g26160 Fragaria vesca HOM05D005434 ORTHO05D006412 4.9e-34 150.2 663 28.5
MELO3C013628.2 Cucumis melo HOM05D005434 ORTHO05D006412 6.5e-34 149.8 584 30.5
Gohir.D11G110300 Gossypium hirsutum HOM05D005434 ORTHO05D006412 5.5e-33 146.7 647 28.7
FAN28G1136 Fragaria x ananassa HOM05D005434 ORTHO05D006412 6.7e-31 139.8 662 28.1
Dinv33176 Davidia involucrata HOM05D005434 ORTHO05D006412 9.6e-30 136.0 299 39.5
Sed0026347 Sechium edule HOM05D005434 ORTHO05D006412 9.6e-30 136.0 590 29.3
FAN23G2884 Fragaria x ananassa HOM05D005434 ORTHO05D006412 1.3e-29 135.6 659 28.2
TAR365G0925 Trochodendron aralioides HOM05D005434 ORTHO05D006412 2.8e-29 134.4 463 32.6
Cpa.g.sc57.27 Carica papaya HOM05D005434 ORTHO05D006412 5.3e-28 130.2 536 31.0
DCAR_002941 Daucus carota HOM05D005434 ORTHO05D006412 6.5e-26 123.2 547 31.1
TAR636G0087 Trochodendron aralioides HOM05D005434 ORTHO05D006412 9.3e-25 119.4 611 28.0
FAN26G2209 Fragaria x ananassa HOM05D005434 ORTHO05D006412 5.7e-22 110.2 638 26.8
Nn3g21972 Nelumbo nucifera HOM05D005434 ORTHO05D006412 2.4e-20 104.8 468 28.0
Lj1A7T44 Lonicera japonica HOM05D005434 ORTHO05D006412 4.1e-20 104.0 518 29.2
AL4G46460 Arabidopsis lyrata HOM05D005434 ORTHO05D006412 9.1e-20 102.8 590 26.3
Actinidia25873 Actinidia chinensis HOM05D005434 ORTHO05D006412 1.2e-19 102.4 534 25.7
CARHR142350 Cardamine hirsuta HOM05D005434 ORTHO05D006412 5.9e-19 100.1 504 26.6
Oeu052591.1 Olea europaea HOM05D005434 ORTHO05D006412 1.7e-18 98.6 568 26.8
Sp4g28980 Schrenkiella parvula HOM05D005434 ORTHO05D006412 3.8e-18 97.4 580 27.1
AT2G46980 Arabidopsis thaliana HOM05D005434 ORTHO05D006412 1.4e-17 95.5 585 26.5
Aa31LG1G28350 Aethionema arabicum HOM05D005434 ORTHO05D006412 2.1e-16 91.7 591 27.6
SHI34042 Sapria himalayana HOM05D005434 ORTHO05D006412 2.7e-16 91.3 585 26.8
DCAR_005712 Daucus carota HOM05D005434 ORTHO05D006412 6.1e-16 90.1 530 26.8
CANSAT25G2989 Cannabis sativa HOM05D005434 ORTHO05D006412 1.4e-15 89.0 695 26.3
Eucgr.K00557 Eucalyptus grandis HOM05D005434 ORTHO05D006412 3.3e-14 84.3 489 26.4
A05p00820 Brassica napus HOM05D005434 ORTHO05D006412 5.7e-14 83.6 576 24.7
Carub.0004s2971 Capsella rubella HOM05D005434 ORTHO05D006412 7.4e-14 83.2 590 26.1
Aqoxy2G02439 Aquilegia oxysepala HOM05D005434 ORTHO05D006412 9.7e-14 82.8 594 25.6
Thhalv10001318m.g Eutrema salsugineum HOM05D005434 ORTHO05D006412 1.7e-13 82.0 576 27.1
BraA05t19085Z Brassica rapa HOM05D005434 ORTHO05D006412 2.8e-13 81.3 576 24.7
MBI19_g04828_MAGBIO Magnolia biondii HOM05D005434 ORTHO05D006412 6.3e-13 80.1 339 30.4
C04p00990 Brassica napus HOM05D005434 ORTHO05D006412 1.4e-12 79.0 571 24.3
PSO210G4596 Papaver somniferum HOM05D005434 ORTHO05D006412 2.4e-12 78.2 637 25.7
PGR142G2929 Punica granatum HOM05D005434 ORTHO05D006412 3.1e-12 77.8 496 27.0
BolC4t21751H Brassica oleracea HOM05D005434 ORTHO05D006412 2.0e-11 75.1 581 24.6
Migut.D00008 Erythranthe guttata HOM05D005434 ORTHO05D006412 4.5e-11 73.9 615 25.9
MBI18_g03842_MAGBIO Magnolia biondii HOM05D005434 ORTHO05D006412 5.0e-10 70.5 476 27.3
CAN.G179.30 Capsicum annuum HOM05D005434 ORTHO05D006412 3.2e-09 67.8 340 28.8
BcaC02g12826 Brassica carinata HOM05D005434 ORTHO05D006412 7.2e-09 66.6 553 23.9
FAN12G4172 Fragaria x ananassa HOM05D005434 ORTHO05D006412 1.6e-08 65.5 127 33.9
ECA247G2130 Erigeron canadensis HOM05D005434 ORTHO05D008082 3.6e-08 64.3 514 25.7
Nitab4.5_0000222g0380 Nicotiana tabacum HOM05D005434 ORTHO05D006412 1.8e-07 62.0 517 25.0
Dinv33187 Davidia involucrata HOM05D005434 ORTHO05D006412 3.9e-07 60.8 191 35.6
EL10Ac4g10377 Beta vulgaris HOM05D005434 ORTHO05D006412 5.2e-07 60.5 504 28.2
AUR62011691 Chenopodium quinoa HOM05D005434 ORTHO05D006412 5.2e-07 60.5 327 26.6
Dinv33188 Davidia involucrata HOM05D005434 ORTHO05D006412 5.2e-07 60.5 99 43.4
Peaxi162Scf00309g00625 Petunia axillaris HOM05D005434 ORTHO05D006412 6.7e-07 60.1 506 25.1
Nitab4.5_0003092g0060 Nicotiana tabacum HOM05D005434 ORTHO05D006412 2.0e-06 58.5 501 25.7
Dinv12077 Davidia involucrata HOM05D005434 ORTHO05D006412 4.4e-06 57.4 69 47.8


User provided reference genes

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