Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr02g0145641 Lupinus albus HOM05D005638 ORTHO05D006913 1.2e-239 832.8 419 100.0
arahy.Tifrunner.gnm1.ann1.CLD3MC Arachis hypogaea HOM05D005638 ORTHO05D006913 7.7e-199 697.2 413 82.8
arahy.Tifrunner.gnm1.ann1.NRC6UQ Arachis hypogaea HOM05D005638 ORTHO05D006913 6.5e-198 694.1 413 82.6
Lj5g0007245 Lotus japonicus HOM05D005638 ORTHO05D006913 7.2e-197 690.6 411 82.2
Ca_30212_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 4.0e-195 684.9 414 82.4
Phvul.007G034200 Phaseolus vulgaris HOM05D005638 ORTHO05D006913 8.8e-195 683.7 413 81.1
Medtr1g109100 Medicago truncatula HOM05D005638 ORTHO05D006913 3.3e-194 681.8 407 82.3
Psat6g222760 Pisum sativum HOM05D005638 ORTHO05D006913 7.5e-194 680.6 414 80.9
Glyma.10G268100 Glycine max HOM05D005638 ORTHO05D006913 2.9e-190 668.7 414 81.2
Glyma.20G123000 Glycine max HOM05D005638 ORTHO05D006913 6.8e-187 657.5 414 80.4
Ciclev10015376m.g Citrus clementina HOM05D005638 ORTHO05D006913 3.6e-180 635.2 409 76.5
Potri.008G126300 Populus trichocarpa HOM05D005638 ORTHO05D006913 9.2e-176 620.5 413 73.6
Gorai.013G001800 Gossypium raimondii HOM05D005638 ORTHO05D006913 2.9e-174 615.5 414 72.5
Thecc.05G134700 Theobroma cacao HOM05D005638 ORTHO05D006913 3.8e-174 615.1 413 73.6
COL.COLO4_22224 Corchorus olitorius HOM05D005638 ORTHO05D006913 4.0e-171 605.1 413 72.9
Gohir.A13G000300 Gossypium hirsutum HOM05D005638 ORTHO05D006913 5.2e-171 604.7 414 71.7
QL01p003053 Quercus lobata HOM05D005638 ORTHO05D006913 1.2e-170 603.6 435 69.7
CSS0002078 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 1.5e-170 603.2 413 71.2
Prupe.1G319900 Prunus persica HOM05D005638 ORTHO05D006913 1.5e-170 603.2 413 71.9
CSS0005399 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 3.4e-170 602.1 413 71.2
Sabra08G0095100 Salix brachista HOM05D005638 ORTHO05D006913 4.4e-170 601.7 405 72.6
Haze_00683 Corylus avellana HOM05D005638 ORTHO05D006913 5.7e-170 601.3 420 70.2
TWI75G0624 Tripterygium wilfordii HOM05D005638 ORTHO05D006913 2.9e-169 599.0 413 71.2
Eucgr.H00037 Eucalyptus grandis HOM05D005638 ORTHO05D006913 1.8e-168 596.3 413 68.8
FvH4_4g26400 Fragaria vesca HOM05D005638 ORTHO05D006913 9.2e-168 594.0 413 71.4
FAN12G2479 Fragaria x ananassa HOM05D005638 ORTHO05D006913 2.0e-167 592.8 413 71.2
FAN12G3267 Fragaria x ananassa HOM05D005638 ORTHO05D006913 2.7e-167 592.4 413 71.4
ClCG07G004650 Citrullus lanatus HOM05D005638 ORTHO05D006913 4.6e-167 591.7 417 71.0
Sed0003483 Sechium edule HOM05D005638 ORTHO05D006913 4.6e-167 591.7 408 71.8
CsaV3_5G010590 Cucumis sativus L. HOM05D005638 ORTHO05D006913 5.9e-167 591.3 408 70.6
MELO3C034164.2 Cucumis melo HOM05D005638 ORTHO05D006913 7.8e-167 590.9 408 70.8
GSVIVG01011806001 Vitis vinifera HOM05D005638 ORTHO05D006913 1.7e-166 589.7 413 71.7
PGR119G2299 Punica granatum HOM05D005638 ORTHO05D006913 1.0e-163 580.5 411 68.9
BcaC06g31332 Brassica carinata HOM05D005638 ORTHO05D006913 3.1e-163 578.9 414 68.4
Hma1.2p1_0882F.1_g232180 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 3.4e-162 575.5 404 70.3
VMungo0720G2401 Vigna mungo HOM05D005638 ORTHO05D006913 4.4e-162 575.1 463 65.9
Nn4g24022 Nelumbo nucifera HOM05D005638 ORTHO05D006913 7.5e-162 574.3 413 68.8
CANSAT01G0033 Cannabis sativa HOM05D005638 ORTHO05D006913 9.8e-162 573.9 412 68.9
MD16G1034700 Malus domestica HOM05D005638 ORTHO05D006913 2.2e-161 572.8 418 68.4
Sp2g12590 Schrenkiella parvula HOM05D005638 ORTHO05D006913 2.2e-161 572.8 414 67.6
CARHR143670 Cardamine hirsuta HOM05D005638 ORTHO05D006913 2.9e-161 572.4 408 68.6
Cc11_g09280 Coffea canephora HOM05D005638 ORTHO05D006913 3.7e-161 572.0 413 67.1
AL5G10070 Arabidopsis lyrata HOM05D005638 ORTHO05D006913 1.1e-160 570.5 408 67.4
EL10Ac6g14273 Beta vulgaris HOM05D005638 ORTHO05D006913 1.9e-160 569.7 415 68.2
Thhalv10000894m.g Eutrema salsugineum HOM05D005638 ORTHO05D006913 1.9e-160 569.7 420 67.6
PGSC0003DMG401030517 Solanum tuberosum HOM05D005638 ORTHO05D006913 1.9e-160 569.7 413 67.1
Hund25015 Selenicereus undatus HOM05D005638 ORTHO05D006913 3.2e-160 568.9 415 67.2
THA.LOC104805050 Tarenaya hassleriana HOM05D005638 ORTHO05D006913 2.7e-159 565.8 414 67.4
RcHm_v2.0_Chr4g0434031 Rosa chinensis HOM05D005638 ORTHO05D006913 3.5e-159 565.5 413 67.8
Sc14g0007070 Simmondsia chinensis HOM05D005638 ORTHO05D006913 3.5e-159 565.5 412 68.0
Carub.0005s0010 Capsella rubella HOM05D005638 ORTHO05D006913 4.6e-159 565.1 414 66.9
Solyc05g008540.3 Solanum lycopersicum HOM05D005638 ORTHO05D006913 1.3e-158 563.5 412 66.3
ECA246G4189 Erigeron canadensis HOM05D005638 ORTHO05D006913 2.3e-158 562.8 408 66.9
CiPaw.05G245200 Carya illinoinensis HOM05D005638 ORTHO05D006913 3.0e-158 562.4 413 68.5
Sopen05g004380 Solanum pennellii HOM05D005638 ORTHO05D006913 5.0e-158 561.6 403 67.0
CAN.G1489.15 Capsicum annuum HOM05D005638 ORTHO05D006913 6.6e-158 561.2 412 66.7
FAN07G1772 Fragaria x ananassa HOM05D005638 ORTHO05D006913 6.6e-158 561.2 456 63.8
A06p44660 Brassica napus HOM05D005638 ORTHO05D006913 1.9e-157 559.7 442 64.3
BcaC06g34215 Brassica carinata HOM05D005638 ORTHO05D006913 4.3e-157 558.5 443 63.7
C07p31590 Brassica napus HOM05D005638 ORTHO05D006913 7.3e-157 557.8 443 63.7
HanXRQChr17g0534901 Helianthus annuus HOM05D005638 ORTHO05D006913 9.5e-157 557.4 408 65.9
Duzib106G1906 Durio zibethinus HOM05D005638 ORTHO05D006913 1.2e-156 557.0 413 67.6
Lsat_1_v5_gn_3_11020 Lactuca sativa HOM05D005638 ORTHO05D006913 1.2e-156 557.0 420 65.7
Manes.10G073400 Manihot esculenta HOM05D005638 ORTHO05D006913 1.6e-156 556.6 408 67.4
Nitab4.5_0000350g0120 Nicotiana tabacum HOM05D005638 ORTHO05D006913 2.8e-156 555.8 420 65.5
AT2G01120 Arabidopsis thaliana HOM05D005638 ORTHO05D006913 4.0e-155 552.0 415 65.3
DCAR_001932 Daucus carota HOM05D005638 ORTHO05D006913 2.6e-154 549.3 422 63.5
Migut.E00391 Erythranthe guttata HOM05D005638 ORTHO05D006913 9.8e-154 547.4 413 64.9
Oeu064207.2 Olea europaea HOM05D005638 ORTHO05D006913 3.7e-153 545.4 459 61.0
Peaxi162Scf00205g01130 Petunia axillaris HOM05D005638 ORTHO05D006913 1.9e-152 543.1 413 64.9
Lj2C166G5 Lonicera japonica HOM05D005638 ORTHO05D006913 2.4e-152 542.7 452 63.1
MSTRG.2199 Avicennia marina HOM05D005638 ORTHO05D006913 1.6e-151 540.0 408 65.7
Aa31LG2G8760 Aethionema arabicum HOM05D005638 ORTHO05D006913 3.3e-149 532.3 414 64.7
vmacro10617 Vaccinium macrocarpon HOM05D005638 ORTHO05D006913 1.4e-147 526.9 458 59.0
FAN22G2072 Fragaria x ananassa HOM05D005638 ORTHO05D006913 2.0e-146 523.1 443 61.9
Aqoxy5G03877 Aquilegia oxysepala HOM05D005638 ORTHO05D006913 1.3e-145 520.4 407 63.6
FAN17G1216 Fragaria x ananassa HOM05D005638 ORTHO05D006913 4.9e-145 518.5 436 63.3
Cpa.g.sc65.90 Carica papaya HOM05D005638 ORTHO05D006913 1.4e-144 516.9 381 68.2
Atru.chr11.333 Acer truncatum HOM05D005638 ORTHO05D006913 7.1e-144 514.6 334 75.1
BcaB07g30423 Brassica carinata HOM05D005638 ORTHO05D006913 3.5e-143 512.3 435 61.1
AUR62042716 Chenopodium quinoa HOM05D005638 ORTHO05D006913 1.0e-142 510.8 448 58.9
BraA06t27339Z Brassica rapa HOM05D005638 ORTHO05D006913 5.1e-142 508.4 416 62.5
Gohir.D13G001900 Gossypium hirsutum HOM05D005638 ORTHO05D006913 1.6e-140 503.4 414 62.8
PSO017G2298 Papaver somniferum HOM05D005638 ORTHO05D006913 2.1e-140 503.1 397 65.2
PSO478G2841 Papaver somniferum HOM05D005638 ORTHO05D006913 2.4e-139 499.6 397 64.7
PSO782G2730 Papaver somniferum HOM05D005638 ORTHO05D006913 3.1e-139 499.2 397 64.5
ATR0691G289 Amborella trichopoda HOM05D005638 ORTHO05D006913 2.2e-137 493.0 406 62.1
HPP92_020141 Vanilla planifolia HOM05D005638 ORTHO05D006913 1.1e-136 490.7 408 59.3
Nitab4.5_0013146g0020 Nicotiana tabacum HOM05D005638 ORTHO05D006913 2.4e-136 489.6 481 54.9
Os01g0683400 Oryza sativa ssp. japonica HOM05D005638 ORTHO05D006913 1.1e-133 480.7 454 53.5
SEGI_39107 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 6.2e-132 474.9 408 58.3
Dinv16164 Davidia involucrata HOM05D005638 ORTHO05D006913 5.3e-131 471.9 342 68.7
SalBow8G2600 Salvia bowleyana HOM05D005638 ORTHO05D006913 1.5e-130 470.3 413 58.1
MBI10_g06749_MAGBIO Magnolia biondii HOM05D005638 ORTHO05D006913 2.9e-129 466.1 360 63.6
Atru.chr11.340 Acer truncatum HOM05D005638 ORTHO05D006913 9.3e-128 461.1 303 74.3
unitig_52.g17425 Utricularia gibba HOM05D005638 ORTHO05D006913 5.6e-125 451.8 417 54.7
TPR.G31713 Trifolium pratense HOM05D005638 ORTHO05D006913 2.6e-122 443.0 264 82.2
TAR622G0052 Trochodendron aralioides HOM05D005638 ORTHO05D006913 8.7e-118 427.9 322 67.4
Zm00001eb156550 Zea mays HOM05D005638 ORTHO05D006913 1.2e-111 407.5 409 53.1
Rhsim11G0032100 Rhododendron simsii HOM05D005638 ORTHO05D006913 1.3e-110 404.1 283 70.3
Ca_23705_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 4.8e-108 395.6 244 82.4
Ah.03g138510 Amaranthus hybridus HOM05D005638 ORTHO05D006913 5.5e-104 382.1 282 66.7
Pp3c16_11150 Physcomitrium patens HOM05D005638 ORTHO05D006913 4.3e-101 372.5 418 47.4
CBR_g38777 Chara braunii HOM05D005638 ORTHO05D006913 1.3e-100 370.9 389 51.7
Mapoly0031s0066 Marchantia polymorpha HOM05D005638 ORTHO05D006913 2.4e-99 366.7 408 51.2
Dinv04905 Davidia involucrata HOM05D005638 ORTHO05D006913 1.9e-96 357.1 409 49.1
Cfa015815 Carpinus fangiana HOM05D005638 ORTHO05D006913 1.0e-89 334.7 220 75.5
A02p31700 Brassica napus HOM05D005638 ORTHO05D006913 3.2e-88 329.7 316 57.3
Hma1.2p1_0882F.1_g232170 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 8.8e-86 321.6 211 75.4
SGA_v2.0_scaffold170G38821 Striga asiatica HOM05D005638 ORTHO05D006913 1.2e-82 311.2 260 59.6
BcaC03g16999 Brassica carinata HOM05D005638 ORTHO05D006913 2.0e-82 310.5 242 63.6
AagrBONN_evm.TU.Sc2ySwM_344.3309 Anthoceros agrestis HOM05D005638 ORTHO05D006913 7.2e-80 302.0 382 44.5
AUR62014211 Chenopodium quinoa HOM05D005638 ORTHO05D006913 7.5e-77 292.0 363 47.4
C02p49080 Brassica napus HOM05D005638 ORTHO05D006913 1.3e-76 291.2 307 50.5
BolC2t10998H Brassica oleracea HOM05D005638 ORTHO05D006913 1.3e-76 291.2 407 42.5
PSO170G3371 Papaver somniferum HOM05D005638 ORTHO05D006913 6.1e-63 245.7 222 59.5
PRCOL_00001621 Prasinoderma coloniale HOM05D005638 ORTHO05D006913 4.1e-59 233.0 400 36.0
MD13G1032700 Malus domestica HOM05D005638 ORTHO05D006913 7.8e-58 228.8 166 68.7
Thecc.06G067600 Theobroma cacao HOM05D005638 ORTHO05D006913 8.6e-57 225.3 143 76.9
Hma1.2p1_0882F.1_g232190 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 2.9e-52 210.3 137 71.5
MD13G1032600 Malus domestica HOM05D005638 ORTHO05D006913 2.3e-49 200.7 151 65.6
CDE11G0817 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 6.6e-49 199.1 125 76.0
SEGI_20204 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 1.8e-46 191.0 179 54.7
SMO351G0247 Selaginella moellendorffii HOM05D005638 ORTHO05D006913 6.8e-46 189.1 403 34.2
MCO02G007 Micromonas commoda HOM05D005638 ORTHO05D006913 3.1e-38 163.7 306 34.0
TPR.G7417 Trifolium pratense HOM05D005638 ORTHO05D006913 1.2e-34 151.8 100 77.0
TPR.G15740 Trifolium pratense HOM05D005638 ORTHO05D006913 1.3e-33 148.3 88 80.7
BraA02t08176Z Brassica rapa HOM05D005638 ORTHO05D006913 7.3e-32 142.5 106 69.8
CDE11G0802 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 2.8e-31 140.6 99 64.6
Rhsim11G0032000 Rhododendron simsii HOM05D005638 ORTHO05D006913 6.4e-28 129.4 155 47.1
Cre17.g726500 Chlamydomonas reinhardtii HOM05D005638 ORTHO05D006913 1.1e-24 118.6 490 25.3
Cfa022174 Carpinus fangiana HOM05D005638 ORTHO05D006913 4.7e-23 113.2 364 27.7
Rhsim09G0101800 Rhododendron simsii HOM05D005638 ORTHO05D006913 1.6e-18 98.2 114 52.6
SEGI_29357 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 2.3e-17 94.4 93 50.5
SHI16222 Sapria himalayana HOM05D000030 ORTHO05D007344 3.6e-15 87.0 54 77.8
FAN28G2655 Fragaria x ananassa HOM05D005638 ORTHO05D006913 8.1e-15 85.9 65 66.2
Rhsim09G0101700 Rhododendron simsii HOM05D005638 ORTHO05D006913 2.2e-12 77.8 79 49.4


User provided reference genes

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